RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 NRSN1Q8IZ57 195 aa18.3■□□□□ 0.52
PSPC1-202ENST00000427943 KCNE4Q8WWG9 221 aa18.3■□□□□ 0.52
PSPC1-202ENST00000427943 FCRL3Q96P31 734 aaPredicted RBP18.3■□□□□ 0.52
PSPC1-202ENST00000427943 BBC3Q96PG8 261 aaPredicted RBP18.3■□□□□ 0.52
PSPC1-202ENST00000427943 WDR24Q96S15 920 aa18.3■□□□□ 0.52
PSPC1-202ENST00000427943 MLPHQ9BV36 600 aaPredicted RBP18.3■□□□□ 0.52
PSPC1-202ENST00000427943 PRORYQ9H606 182 aa18.3■□□□□ 0.52
PSPC1-202ENST00000427943 SAE1Q9UBE0 346 aaPredicted RBP18.3■□□□□ 0.52
PSPC1-202ENST00000427943 ANKRD66B4E2M5 251 aa18.29■□□□□ 0.52
PSPC1-202ENST00000427943 PSTPIP1O43586 416 aa18.29■□□□□ 0.52
PSPC1-202ENST00000427943 NUDT21O43809 227 aaKnown RBP18.29■□□□□ 0.52
PSPC1-202ENST00000427943 TNFSF15O95150 251 aa18.29■□□□□ 0.52
PSPC1-202ENST00000427943 ASMTLO95671 621 aa18.29■□□□□ 0.52
PSPC1-202ENST00000427943 ECEL1O95672 775 aa18.29■□□□□ 0.52
PSPC1-202ENST00000427943 ATP1A1P05023 1023 aaKnown RBP18.29■□□□□ 0.52
PSPC1-202ENST00000427943 HGFP14210 728 aa18.29■□□□□ 0.52
PSPC1-202ENST00000427943 PNLIPP16233 465 aa18.29■□□□□ 0.52
PSPC1-202ENST00000427943 PECAM1P16284 738 aaPredicted RBP18.29■□□□□ 0.52
PSPC1-202ENST00000427943 ACTR1BP42025 376 aa18.29■□□□□ 0.52
PSPC1-202ENST00000427943 CDKN2BP42772 138 aa18.29■□□□□ 0.52
PSPC1-202ENST00000427943 MARCKSL1P49006 195 aa18.29■□□□□ 0.52
PSPC1-202ENST00000427943 SPINT3P49223 89 aa18.29■□□□□ 0.52
PSPC1-202ENST00000427943 ACTR1AP61163 376 aa18.29■□□□□ 0.52
PSPC1-202ENST00000427943 SPOCD1Q6ZMY3 1216 aa18.29■□□□□ 0.52
PSPC1-202ENST00000427943 EXD1Q8NHP7 514 aa18.29■□□□□ 0.52
PSPC1-202ENST00000427943 IMP4Q96G21 291 aaKnown RBP18.29■□□□□ 0.52
PSPC1-202ENST00000427943 SCARF2Q96GP6 870 aaPredicted RBP18.29■□□□□ 0.52
PSPC1-202ENST00000427943 COX14Q96I36 57 aa18.29■□□□□ 0.52
PSPC1-202ENST00000427943 ADGRE3Q9BY15 652 aa18.29■□□□□ 0.52
PSPC1-202ENST00000427943 PKD2L2Q9NZM6 624 aa18.29■□□□□ 0.52
PSPC1-202ENST00000427943 ALG6Q9Y672 507 aa18.29■□□□□ 0.52
PSPC1-202ENST00000427943 OAS3Q9Y6K5 1087 aaKnown RBP18.29■□□□□ 0.52
PSPC1-202ENST00000427943 FADS2P1A8MWK0 482 aa18.28■□□□□ 0.52
PSPC1-202ENST00000427943 CDRT15L2A8MXV6 281 aa18.28■□□□□ 0.52
PSPC1-202ENST00000427943 KLK10O43240 276 aa18.28■□□□□ 0.52
PSPC1-202ENST00000427943 CST8O60676 142 aa18.28■□□□□ 0.52
PSPC1-202ENST00000427943 MT-CYBP00156 380 aaPredicted RBP18.28■□□□□ 0.52
PSPC1-202ENST00000427943 PYGLP06737 847 aa18.28■□□□□ 0.52
PSPC1-202ENST00000427943 HADHBP55084 474 aaKnown RBP18.28■□□□□ 0.52
PSPC1-202ENST00000427943 CXADRP78310 365 aa18.28■□□□□ 0.52
PSPC1-202ENST00000427943 MAP9Q49MG5 647 aa18.28■□□□□ 0.52
PSPC1-202ENST00000427943 PYCR3Q53H96 274 aa18.28■□□□□ 0.52
PSPC1-202ENST00000427943 HENMT1Q5T8I9 393 aaKnown RBP18.28■□□□□ 0.52
PSPC1-202ENST00000427943 RAB11FIP2Q7L804 512 aa18.28■□□□□ 0.52
PSPC1-202ENST00000427943 TMPRSS9Q7Z410 1059 aa18.28■□□□□ 0.52
PSPC1-202ENST00000427943 NT5DC3Q86UY8 548 aa18.28■□□□□ 0.52
PSPC1-202ENST00000427943 NLRP8Q86W28 1048 aa18.28■□□□□ 0.52
PSPC1-202ENST00000427943 C17orf82Q86X59 251 aaPredicted RBP18.28■□□□□ 0.52
PSPC1-202ENST00000427943 GALNT13Q8IUC8 556 aa18.28■□□□□ 0.52
PSPC1-202ENST00000427943 NAGSQ8N159 534 aa18.28■□□□□ 0.52
PSPC1-202ENST00000427943 ARL14Q8N4G2 192 aa18.28■□□□□ 0.52
PSPC1-202ENST00000427943 SPATA22Q8NHS9 363 aa18.28■□□□□ 0.52
PSPC1-202ENST00000427943 CCHCR1Q8TD31 782 aa18.28■□□□□ 0.52
PSPC1-202ENST00000427943 HAUS1Q96CS2 278 aa18.28■□□□□ 0.52
PSPC1-202ENST00000427943 TMEM74Q96NL1 305 aa18.28■□□□□ 0.52
PSPC1-202ENST00000427943 TRIB3Q96RU7 358 aa18.28■□□□□ 0.52
PSPC1-202ENST00000427943 STRADBQ9C0K7 418 aa18.28■□□□□ 0.52
PSPC1-202ENST00000427943 SLC25A51Q9H1U9 297 aa18.28■□□□□ 0.52
PSPC1-202ENST00000427943 PRKAB1Q9Y478 270 aa18.28■□□□□ 0.52
PSPC1-202ENST00000427943 PCYT1BQ9Y5K3 369 aaPredicted RBP18.28■□□□□ 0.52
PSPC1-202ENST00000427943 RHPN2P1A8MT19 583 aa18.27■□□□□ 0.52
PSPC1-202ENST00000427943 PLD2O14939 933 aa18.27■□□□□ 0.52
PSPC1-202ENST00000427943 LCA5LO95447 670 aa18.27■□□□□ 0.52
PSPC1-202ENST00000427943 PTPN3P26045 913 aa18.27■□□□□ 0.52
PSPC1-202ENST00000427943 CCKBRP32239 447 aa18.27■□□□□ 0.52
PSPC1-202ENST00000427943 UGT1A5P35504 534 aa18.27■□□□□ 0.52
PSPC1-202ENST00000427943 OR1D5P58170 312 aa18.27■□□□□ 0.52
PSPC1-202ENST00000427943 B4GALNT1Q00973 533 aa18.27■□□□□ 0.52
PSPC1-202ENST00000427943 ADCY2Q08462 1091 aa18.27■□□□□ 0.52
PSPC1-202ENST00000427943 BIRC2Q13490 618 aa18.27■□□□□ 0.52
PSPC1-202ENST00000427943 PRKD1Q15139 912 aaPredicted RBP18.27■□□□□ 0.52
PSPC1-202ENST00000427943 TAZQ16635 292 aa18.27■□□□□ 0.52
PSPC1-202ENST00000427943 AMZ1Q400G9 498 aa18.27■□□□□ 0.52
PSPC1-202ENST00000427943 ALS2CLQ60I27 953 aa18.27■□□□□ 0.52
PSPC1-202ENST00000427943 FBXO39Q8N4B4 442 aa18.27■□□□□ 0.52
PSPC1-202ENST00000427943 FAM83DQ9H4H8 585 aa18.27■□□□□ 0.52
PSPC1-202ENST00000427943 RDH14Q9HBH5 336 aa18.27■□□□□ 0.52
PSPC1-202ENST00000427943 GLOD4Q9HC38 313 aa18.27■□□□□ 0.52
PSPC1-202ENST00000427943 UBP1Q9NZI7 540 aa18.27■□□□□ 0.52
PSPC1-202ENST00000427943 CNOT6Q9ULM6 557 aaKnown RBP18.27■□□□□ 0.52
PSPC1-202ENST00000427943 SHOC2Q9UQ13 582 aa18.27■□□□□ 0.52
PSPC1-202ENST00000427943 PCDHA13Q9Y5I0 950 aa18.27■□□□□ 0.52
PSPC1-202ENST00000427943 A0A0A6YYK5 440 aaPredicted RBP18.26■□□□□ 0.51
PSPC1-202ENST00000427943 F5H423 210 aaPredicted RBP18.26■□□□□ 0.51
PSPC1-202ENST00000427943 TMX2-CTNND1H3BSU7 103 aa18.26■□□□□ 0.51
PSPC1-202ENST00000427943 B4GAT1O43505 415 aa18.26■□□□□ 0.51
PSPC1-202ENST00000427943 ITGA2BP08514 1039 aa18.26■□□□□ 0.51
PSPC1-202ENST00000427943 ALDH4A1P30038 563 aa18.26■□□□□ 0.51
PSPC1-202ENST00000427943 CYLC1P35663 651 aaPredicted RBP18.26■□□□□ 0.51
PSPC1-202ENST00000427943 ZNF75DP51815 510 aa18.26■□□□□ 0.51
PSPC1-202ENST00000427943 TFDP2Q14188 446 aa18.26■□□□□ 0.51
PSPC1-202ENST00000427943 TEX44Q53QW1 395 aa18.26■□□□□ 0.51
PSPC1-202ENST00000427943 TFDP3Q5H9I0 405 aa18.26■□□□□ 0.51
PSPC1-202ENST00000427943 PHF19Q5T6S3 580 aa18.26■□□□□ 0.51
PSPC1-202ENST00000427943 BROXQ5VW32 411 aa18.26■□□□□ 0.51
PSPC1-202ENST00000427943 ZNF438Q7Z4V0 828 aa18.26■□□□□ 0.51
PSPC1-202ENST00000427943 CLEC14AQ86T13 490 aa18.26■□□□□ 0.51
PSPC1-202ENST00000427943 JAMLQ86YT9 394 aa18.26■□□□□ 0.51
PSPC1-202ENST00000427943 CCDC50Q8IVM0 306 aa18.26■□□□□ 0.51
PSPC1-202ENST00000427943 RAVER1Q8IY67 606 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms