RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 PRODHO43272 600 aa9.92□□□□□ -0.82
CLTCL1-202ENST00000427926 OR1F1O43749 312 aa9.92□□□□□ -0.82
CLTCL1-202ENST00000427926 PIGNO95427 931 aa9.92□□□□□ -0.82
CLTCL1-202ENST00000427926 SLURP2P0DP57 97 aa9.92□□□□□ -0.82
CLTCL1-202ENST00000427926 RPL22P35268 128 aaKnown RBP9.92□□□□□ -0.82
CLTCL1-202ENST00000427926 UGT2B15P54855 530 aa9.92□□□□□ -0.82
CLTCL1-202ENST00000427926 YBEYP58557 167 aaPredicted RBP9.92□□□□□ -0.82
CLTCL1-202ENST00000427926 MRPS22P82650 360 aaKnown RBP9.92□□□□□ -0.82
CLTCL1-202ENST00000427926 DDI2Q5TDH0 399 aa9.92□□□□□ -0.82
CLTCL1-202ENST00000427926 C16orf46Q6P387 395 aa9.92□□□□□ -0.82
CLTCL1-202ENST00000427926 KDM7AQ6ZMT4 941 aa9.92□□□□□ -0.82
CLTCL1-202ENST00000427926 STK32CQ86UX6 486 aa9.92□□□□□ -0.82
CLTCL1-202ENST00000427926 TMEM156Q8N614 296 aa9.92□□□□□ -0.82
CLTCL1-202ENST00000427926 SLC43A3Q8NBI5 491 aa9.92□□□□□ -0.82
CLTCL1-202ENST00000427926 EBNA1BP2Q99848 306 aaKnown RBP9.92□□□□□ -0.82
CLTCL1-202ENST00000427926 TRPS1Q9UHF7 1281 aa9.92□□□□□ -0.82
CLTCL1-202ENST00000427926 KLRG2A4D1S0 409 aaPredicted RBP9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 FCHO1O14526 889 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 B3GALT2O43825 422 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 LRATO95237 230 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 CACNG1Q06432 222 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 KLHL12Q53G59 568 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 ZNF776Q68DI1 518 aaPredicted RBP9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 ZNF57Q68EA5 555 aaPredicted RBP9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 Q8N9G6 341 aaPredicted RBP9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 TRPV3Q8NET8 790 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 GRIP2Q9C0E4 1043 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 PDZD7Q9H5P4 517 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 RNF121Q9H920 327 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 PRDM8Q9NQV8 689 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 CAPN14A8MX76 684 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 CYB5AP00167 134 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 CALCAP01258 141 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 ATP5F1P24539 256 aaPredicted RBP9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 RPL14P50914 215 aaKnown RBP9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 ITGB3BPQ13352 177 aaPredicted RBP9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 SAMD4BQ5PRF9 694 aaKnown RBP9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 NAIF1Q69YI7 327 aaPredicted RBP9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 ARHGAP22Q7Z5H3 698 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 DEFB107AQ8IZN7 70 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 LRRN4CLQ8ND94 238 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 TSPAN14Q8NG11 270 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 TEX47Q8TBZ9 253 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 DNAJC9Q8WXX5 260 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 GINS4Q9BRT9 223 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 NDC1Q9BTX1 674 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 RAB11FIP5Q9BXF6 653 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 GSDMCQ9BYG8 508 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 DIABLOQ9NR28 239 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 MTF2Q9Y483 593 aaPredicted RBP9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 H0YGN5 161 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 NRP1O14786 923 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 OR10H3O60404 316 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 KLHL18O94889 574 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 CALB2P22676 271 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 CCNIQ14094 377 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 GRB14Q14449 540 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 LARS2Q15031 903 aaKnown RBP9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 PIK3R6Q5UE93 754 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 MMAAQ8IVH4 418 aaKnown RBP9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 OR4K2Q8NGD2 314 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 EEF1AKMT1Q8WVE0 214 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.91□□□□□ -0.822e-7■■■■■ 39
CLTCL1-202ENST00000427926 HEMK1Q9Y5R4 338 aaPredicted RBP9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 VIRMAQ69YN4 1812 aaKnown RBP9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 C5orf60A6NFR6 353 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 BIRC5O15392 142 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 NDUFS1P28331 727 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 HK2P52789 917 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 RAB10P61026 200 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 DSG1Q02413 1049 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 GALNT18Q6P9A2 607 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 TMEM220Q6QAJ8 160 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 GCNT7Q6ZNI0 430 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 DNAJB7Q7Z6W7 309 aaPredicted RBP9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 ECHDC2Q86YB7 292 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 LRRC34Q8IZ02 419 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 OR52K2Q8NGK3 314 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 FBXO30Q8TB52 745 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 NUS1Q96E22 293 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 VPS35Q96QK1 796 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 TMEM175Q9BSA9 504 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 BLOC1S4Q9NUP1 217 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 SUSD2Q9UGT4 822 aa9.91□□□□□ -0.82
CLTCL1-202ENST00000427926 IQCMA0A1B0GVH7 501 aa9.9□□□□□ -0.82
CLTCL1-202ENST00000427926 A0A1W2PQ45 241 aaPredicted RBP9.9□□□□□ -0.82
CLTCL1-202ENST00000427926 A0A1W2PQY0 241 aa9.9□□□□□ -0.82
CLTCL1-202ENST00000427926 RPP40O75818 363 aaKnown RBP9.9□□□□□ -0.82
CLTCL1-202ENST00000427926 SLC7A1P30825 629 aa9.9□□□□□ -0.82
CLTCL1-202ENST00000427926 PBX3P40426 434 aa9.9□□□□□ -0.82
CLTCL1-202ENST00000427926 GDI2P50395 445 aaKnown RBP9.9□□□□□ -0.82
CLTCL1-202ENST00000427926 MAPK10P53779 464 aa9.9□□□□□ -0.82
CLTCL1-202ENST00000427926 ZNF280AP59817 542 aaPredicted RBP9.9□□□□□ -0.82
CLTCL1-202ENST00000427926 GRM2Q14416 872 aa9.9□□□□□ -0.82
CLTCL1-202ENST00000427926 DLG2Q15700 870 aa9.9□□□□□ -0.82
CLTCL1-202ENST00000427926 RFTN2Q52LD8 501 aaPredicted RBP9.9□□□□□ -0.82
CLTCL1-202ENST00000427926 POTEHQ6S545 545 aa9.9□□□□□ -0.82
CLTCL1-202ENST00000427926 KYAT3Q6YP21 454 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms