RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 LRRN4Q8WUT4 740 aa12.98□□□□□ -0.33
DEPDC7-203ENST00000427755 HTR3CQ8WXA8 447 aa12.98□□□□□ -0.33
DEPDC7-203ENST00000427755 EXTL1Q92935 676 aa12.98□□□□□ -0.33
DEPDC7-203ENST00000427755 FAF2Q96CS3 445 aa12.98□□□□□ -0.33
DEPDC7-203ENST00000427755 TSGA13Q96PP4 275 aa12.98□□□□□ -0.33
DEPDC7-203ENST00000427755 WDR24Q96S15 920 aa12.98□□□□□ -0.33
DEPDC7-203ENST00000427755 LYSMD1Q96S90 227 aa12.98□□□□□ -0.33
DEPDC7-203ENST00000427755 ZNF670Q9BS34 389 aa12.98□□□□□ -0.33
DEPDC7-203ENST00000427755 RIOK2Q9BVS4 552 aaKnown RBP12.98□□□□□ -0.33
DEPDC7-203ENST00000427755 CBX8Q9HC52 389 aa12.98□□□□□ -0.33
DEPDC7-203ENST00000427755 RBM22Q9NW64 420 aaKnown RBP eCLIP12.98□□□□□ -0.33
DEPDC7-203ENST00000427755 AKAP7Q9P0M2 348 aaPredicted RBP12.98□□□□□ -0.33
DEPDC7-203ENST00000427755 TMEM9Q9P0T7 183 aa12.98□□□□□ -0.33
DEPDC7-203ENST00000427755 CNOT6Q9ULM6 557 aaKnown RBP12.98□□□□□ -0.33
DEPDC7-203ENST00000427755 CAPN11Q9UMQ6 739 aa12.98□□□□□ -0.33
DEPDC7-203ENST00000427755 PCDHGA3Q9Y5H0 932 aa12.98□□□□□ -0.33
DEPDC7-203ENST00000427755 ZW10O43264 779 aa12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 DNAJC6O75061 913 aa12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 CLDN7O95471 211 aa12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 EML2O95834 649 aa12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 GYPCP04921 128 aa12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 HLA-DQB2P05538 268 aa12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 PYGLP06737 847 aa12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 CES1P23141 567 aa12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 CCNCP24863 283 aa12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 FASLGP48023 281 aa12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 TAS2R40P59535 323 aa12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 GBE1Q04446 702 aa12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 SLC10A2Q12908 348 aaPredicted RBP12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 PEX6Q13608 980 aa12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 LRP8Q14114 963 aa12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 IFI16Q16666 785 aaKnown RBP12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 HADHQ16836 314 aaKnown RBP12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 ANKRD20A8PQ5CZ79 823 aa12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 TIGD7Q6NT04 549 aaPredicted RBP12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 XKR5Q6UX68 686 aa12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 MARK2Q7KZI7 788 aaKnown RBP12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 RAVER1Q8IY67 606 aaKnown RBP12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 NRSN1Q8IZ57 195 aa12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 NDUFAF2Q8N183 169 aa12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 SFRP1Q8N474 314 aa12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 PQLC3Q8N755 202 aa12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 EXD1Q8NHP7 514 aa12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 ZNF564Q8TBZ8 553 aaPredicted RBP12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 CPLX3Q8WVH0 158 aa12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 TAAR9Q96RI9 348 aa12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 PDP2Q9P2J9 529 aa12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 AMACRQ9UHK6 382 aa12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 PCDHB11Q9Y5F2 797 aa12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 OAS3Q9Y6K5 1087 aaKnown RBP12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 ANKRD36A6QL64 1941 aa12.97□□□□□ -0.33
DEPDC7-203ENST00000427755 STMND1H3BQB6 276 aa12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 PYCARD-AS1I3L0S3 204 aa12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 INPP4BO15327 924 aa12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 PROSCO94903 275 aa12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 ITGB6P18564 788 aa12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 MPSTP25325 297 aa12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 GJC1P36383 396 aa12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 SSR1P43307 286 aaKnown RBP12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 EPHB1P54762 984 aa12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 UBASH3AP57075 661 aa12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 RPL26P61254 145 aaKnown RBP12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 CYP4F2P78329 520 aa12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 GPLD1P80108 840 aa12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 BIRC2Q13490 618 aa12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 PDK2Q15119 407 aa12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 NFKBIBQ15653 356 aa12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 HENMT1Q5T8I9 393 aaKnown RBP12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 TMEM164Q5U3C3 297 aa12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 ZNF761Q86XN6 746 aaPredicted RBP12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 GALNT13Q8IUC8 556 aa12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 KCTD6Q8NC69 237 aa12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 AGBL5Q8NDL9 886 aa12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 LPCAT1Q8NF37 534 aa12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 SLC37A2Q8TED4 501 aa12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 DPYSL5Q9BPU6 564 aa12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 STARD5Q9NSY2 213 aa12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 KCNK4Q9NYG8 393 aa12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 VPS18Q9P253 973 aa12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 DNPEPQ9ULA0 475 aa12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 RPL26L1Q9UNX3 145 aaKnown RBP12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 B3GALT1Q9Y5Z6 326 aa12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 FLNBO75369 2602 aaKnown RBP12.96□□□□□ -0.33
DEPDC7-203ENST00000427755 TRBV23OR9-2A0A075B6M9 112 aa12.95□□□□□ -0.34
DEPDC7-203ENST00000427755 A6NCN8 305 aa12.95□□□□□ -0.34
DEPDC7-203ENST00000427755 FADS2P1A8MWK0 482 aa12.95□□□□□ -0.34
DEPDC7-203ENST00000427755 SLC28A2O43868 658 aa12.95□□□□□ -0.34
DEPDC7-203ENST00000427755 ATP1A1P05023 1023 aaKnown RBP12.95□□□□□ -0.34
DEPDC7-203ENST00000427755 MMP2P08253 660 aa12.95□□□□□ -0.34
DEPDC7-203ENST00000427755 FAM87AP0C7U9 286 aa12.95□□□□□ -0.34
DEPDC7-203ENST00000427755 SPINT3P49223 89 aa12.95□□□□□ -0.34
DEPDC7-203ENST00000427755 NFATC3Q12968 1075 aa12.95□□□□□ -0.34
DEPDC7-203ENST00000427755 TBR1Q16650 682 aa12.95□□□□□ -0.34
DEPDC7-203ENST00000427755 QPCTQ16769 361 aa12.95□□□□□ -0.34
DEPDC7-203ENST00000427755 TMEM71Q6P5X7 295 aa12.95□□□□□ -0.34
DEPDC7-203ENST00000427755 BMPERQ8N8U9 685 aa12.95□□□□□ -0.34
DEPDC7-203ENST00000427755 JPH3Q8WXH2 748 aaPredicted RBP12.95□□□□□ -0.34
DEPDC7-203ENST00000427755 ART4Q93070 314 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms