RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 HTR3EA5X5Y0 456 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 DDX39AO00148 427 aaKnown RBP4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 ATP2A1O14983 1001 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 SMAD9O15198 467 aaKnown RBP4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 PAX4O43316 350 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 SPRY1O43609 319 aaPredicted RBP4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 PENKP01210 267 aaPredicted RBP4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 GJA1P17302 382 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 WT1P19544 449 aaPredicted RBP4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 RFC1P35251 1148 aaPredicted RBP4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 TUBB4BP68371 445 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 GRSF1Q12849 480 aaKnown RBP eCLIP4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 PPIGQ13427 754 aaKnown RBP eCLIP4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 NHSL2Q5HYW2 709 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 MEX3CQ5U5Q3 659 aaKnown RBP4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 HAUS6Q7Z4H7 955 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 SLC25A41Q8N5S1 370 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 CMASQ8NFW8 434 aaPredicted RBP4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 CORO2AQ92828 525 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 EGLN2Q96KS0 407 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 ZNF341Q9BYN7 854 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 MMADHCQ9H3L0 296 aaPredicted RBP4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 KCNK15Q9H427 330 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 MOV10Q9HCE1 1003 aaKnown RBP4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 EPB41L5Q9HCM4 733 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 DDX4Q9NQI0 724 aaKnown RBP4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 COQ3Q9NZJ6 369 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 NFE2L3Q9Y4A8 694 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 CLIC4Q9Y696 253 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 KIAA0586Q9BVV6 1533 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 IGSF1Q8N6C5 1336 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 ZNF541Q9H0D2 1346 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 ADCY10Q96PN6 1610 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 A4D1N5 150 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 TMEM202A6NGA9 273 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 DBX1A6NMT0 343 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 TARM1B6A8C7 271 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 BCL10O95999 233 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 SUPT20HL2P0C7V6 817 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 VPREB1P12018 145 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 ACHEP22303 614 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 FAM27E3Q08E93 113 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 SREBF2Q12772 1141 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 COASYQ13057 564 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 ARHGEF6Q15052 776 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 PNLIPRP3Q17RR3 467 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 SUPT20HL1Q3ZLR7 823 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 GLRA4Q5JXX5 417 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 PQLC2Q6ZP29 291 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 SPATA19Q7Z5L4 167 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 LDB1Q86U70 411 aaPredicted RBP4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 ADIPOR2Q86V24 386 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 PARP16Q8N5Y8 322 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 RBM15BQ8NDT2 890 aaKnown RBP4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 DVL3Q92997 716 aaPredicted RBP4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 CABS1Q96KC9 395 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 TMEM79Q9BSE2 394 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 PCGF1Q9BSM1 259 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 NOL11Q9H8H0 719 aaKnown RBP4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 PNRC2Q9NPJ4 139 aaKnown RBP4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 SLC2A4RGQ9NR83 387 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 CHCHD3Q9NX63 227 aaKnown RBP4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 CACNG4Q9UBN1 327 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 HACL1Q9UJ83 578 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 PA2G4Q9UQ80 394 aaKnown RBP4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 LAMP3Q9UQV4 416 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 SALL3Q9BXA9 1300 aa4.61□□□□□ -1.67
NUDCD1-202ENST00000427660 GCC2Q8IWJ2 1684 aa4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 KANSL1LA0AUZ9 987 aa4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 ENO4A6NNW6 628 aa4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 H3BQ06 376 aaPredicted RBP4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 RHODO00212 210 aa4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 HSPB6O14558 160 aa4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 MAP2K7O14733 419 aa4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 RSL1D1O76021 490 aaKnown RBP4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 LINGO3P0C6S8 592 aa4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 TFPIP10646 304 aa4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 KRT4P19013 534 aa4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 CD58P19256 250 aa4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 UBA1P22314 1058 aaKnown RBP4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 AMPHP49418 695 aa4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 FOXI1Q12951 378 aa4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 TSTD2Q5T7W7 516 aa4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 PLA2G4FQ68DD2 849 aa4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 TRILQ7L0X0 811 aa4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 CACNA2D4Q7Z3S7 1137 aa4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 CENPVQ7Z7K6 275 aaPredicted RBP4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 CEP57Q86XR8 500 aa4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 MFN1Q8IWA4 741 aa4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 TUSC5Q8IXB3 177 aa4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 PALM2Q8IXS6 379 aa4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 ATAD1Q8NBU5 361 aa4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 SCCPDHQ8NBX0 429 aa4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 MSI2Q96DH6 328 aaKnown RBP4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 ZNF570Q96NI8 536 aa4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 KRTAP4-8Q9BYQ9 185 aa4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 GOLPH3LQ9H4A5 285 aa4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 IL1RAPL2Q9NP60 686 aa4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 LARSQ9P2J5 1176 aaKnown RBP4.6□□□□□ -1.67
NUDCD1-202ENST00000427660 PLEKHB1Q9UF11 243 aaPredicted RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms