RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 OR4L1Q8NH43 312 aa15.34■□□□□ 0.05
COL11A1-204ENST00000427239 ZNF398Q8TD17 642 aa15.34■□□□□ 0.05
COL11A1-204ENST00000427239 ZNF669Q96BR6 464 aaPredicted RBP15.34■□□□□ 0.05
COL11A1-204ENST00000427239 WDR83Q9BRX9 315 aaKnown RBP15.34■□□□□ 0.05
COL11A1-204ENST00000427239 SPATA16Q9BXB7 569 aa15.34■□□□□ 0.05
COL11A1-204ENST00000427239 IRF2BPLQ9H1B7 796 aa15.34■□□□□ 0.05
COL11A1-204ENST00000427239 EBF2Q9HAK2 575 aa15.34■□□□□ 0.05
COL11A1-204ENST00000427239 ZNF318Q5VUA4 2279 aa15.34■□□□□ 0.05
COL11A1-204ENST00000427239 DYNC1I1O14576 645 aa15.33■□□□□ 0.04
COL11A1-204ENST00000427239 TOR1BO14657 336 aa15.33■□□□□ 0.04
COL11A1-204ENST00000427239 PRAMEF1O95521 474 aa15.33■□□□□ 0.04
COL11A1-204ENST00000427239 FAM153BP0C7A2 387 aa15.33■□□□□ 0.04
COL11A1-204ENST00000427239 MC4RP32245 332 aa15.33■□□□□ 0.04
COL11A1-204ENST00000427239 ARCN1P48444 511 aaKnown RBP15.33■□□□□ 0.04
COL11A1-204ENST00000427239 ARSDP51689 593 aa15.33■□□□□ 0.04
COL11A1-204ENST00000427239 NFATC2Q13469 925 aa15.33■□□□□ 0.04
COL11A1-204ENST00000427239 PEX6Q13608 980 aa15.33■□□□□ 0.04
COL11A1-204ENST00000427239 SIM2Q14190 667 aaPredicted RBP15.33■□□□□ 0.04
COL11A1-204ENST00000427239 STAT4Q14765 748 aa15.33■□□□□ 0.04
COL11A1-204ENST00000427239 FAM153CQ494X1 144 aa15.33■□□□□ 0.04
COL11A1-204ENST00000427239 ALS2CLQ60I27 953 aa15.33■□□□□ 0.04
COL11A1-204ENST00000427239 EMBQ6PCB8 327 aa15.33■□□□□ 0.04
COL11A1-204ENST00000427239 AFTPHQ6ULP2 937 aa15.33■□□□□ 0.04
COL11A1-204ENST00000427239 FAM151BQ6UXP7 276 aa15.33■□□□□ 0.04
COL11A1-204ENST00000427239 TRMT10CQ7L0Y3 403 aaKnown RBP15.33■□□□□ 0.04
COL11A1-204ENST00000427239 SNX20Q7Z614 316 aa15.33■□□□□ 0.04
COL11A1-204ENST00000427239 LMNTD2Q8IXW0 634 aa15.33■□□□□ 0.04
COL11A1-204ENST00000427239 TMEM145Q8NBT3 493 aa15.33■□□□□ 0.04
COL11A1-204ENST00000427239 GABPB2Q8TAK5 448 aaPredicted RBP15.33■□□□□ 0.04
COL11A1-204ENST00000427239 GSDMBQ8TAX9 411 aa15.33■□□□□ 0.04
COL11A1-204ENST00000427239 SNX19Q92543 992 aa15.33■□□□□ 0.04
COL11A1-204ENST00000427239 CFAP36Q96G28 342 aa15.33■□□□□ 0.04
COL11A1-204ENST00000427239 SERAC1Q96JX3 654 aa15.33■□□□□ 0.04
COL11A1-204ENST00000427239 C9orf72Q96LT7 481 aa15.33■□□□□ 0.04
COL11A1-204ENST00000427239 TRIM56Q9BRZ2 755 aaKnown RBP15.33■□□□□ 0.04
COL11A1-204ENST00000427239 KCNH6Q9H252 994 aa15.33■□□□□ 0.04
COL11A1-204ENST00000427239 SUDS3Q9H7L9 328 aaPredicted RBP15.33■□□□□ 0.04
COL11A1-204ENST00000427239 LRRC4CQ9HCJ2 640 aa15.33■□□□□ 0.04
COL11A1-204ENST00000427239 MBNL1Q9NR56 388 aaKnown RBP15.33■□□□□ 0.04
COL11A1-204ENST00000427239 FNDC3AQ9Y2H6 1198 aaKnown RBP15.33■□□□□ 0.04
COL11A1-204ENST00000427239 CCDC162PA2VCL2 907 aa15.32■□□□□ 0.04
COL11A1-204ENST00000427239 AGAP14A8MT82 685 aa15.32■□□□□ 0.04
COL11A1-204ENST00000427239 GAPDHSO14556 408 aaPredicted RBP15.32■□□□□ 0.04
COL11A1-204ENST00000427239 RAD51BO15315 384 aa15.32■□□□□ 0.04
COL11A1-204ENST00000427239 ITGALP20701 1170 aa15.32■□□□□ 0.04
COL11A1-204ENST00000427239 PTGER3P43115 390 aa15.32■□□□□ 0.04
COL11A1-204ENST00000427239 GPR1P46091 355 aa15.32■□□□□ 0.04
COL11A1-204ENST00000427239 CACNG1Q06432 222 aa15.32■□□□□ 0.04
COL11A1-204ENST00000427239 INPP5AQ14642 412 aa15.32■□□□□ 0.04
COL11A1-204ENST00000427239 IRF4Q15306 451 aa15.32■□□□□ 0.04
COL11A1-204ENST00000427239 CHRNA6Q15825 494 aa15.32■□□□□ 0.04
COL11A1-204ENST00000427239 KYNUQ16719 465 aa15.32■□□□□ 0.04
COL11A1-204ENST00000427239 MAP9Q49MG5 647 aa15.32■□□□□ 0.04
COL11A1-204ENST00000427239 LYSMD4Q5XG99 296 aa15.32■□□□□ 0.04
COL11A1-204ENST00000427239 RAET1GQ6H3X3 334 aa15.32■□□□□ 0.04
COL11A1-204ENST00000427239 RGL4Q8IZJ4 473 aa15.32■□□□□ 0.04
COL11A1-204ENST00000427239 VPS35Q96QK1 796 aa15.32■□□□□ 0.04
COL11A1-204ENST00000427239 ORAI3Q9BRQ5 295 aa15.32■□□□□ 0.04
COL11A1-204ENST00000427239 ASB8Q9H765 288 aa15.32■□□□□ 0.04
COL11A1-204ENST00000427239 EIF2B4Q9UI10 523 aaKnown RBP15.32■□□□□ 0.04
COL11A1-204ENST00000427239 FRYLO94915 3013 aa15.32■□□□□ 0.04
COL11A1-204ENST00000427239 EML5Q05BV3 1969 aa15.32■□□□□ 0.04
COL11A1-204ENST00000427239 CCL22O00626 93 aa15.31■□□□□ 0.04
COL11A1-204ENST00000427239 GOT2P00505 430 aaKnown RBP15.31■□□□□ 0.04
COL11A1-204ENST00000427239 ARNTP27540 789 aa15.31■□□□□ 0.04
COL11A1-204ENST00000427239 PHBP35232 272 aa15.31■□□□□ 0.04
COL11A1-204ENST00000427239 PPARGP37231 505 aaPredicted RBP15.31■□□□□ 0.04
COL11A1-204ENST00000427239 DPP6P42658 865 aa15.31■□□□□ 0.04
COL11A1-204ENST00000427239 DHPSP49366 369 aaPredicted RBP15.31■□□□□ 0.04
COL11A1-204ENST00000427239 PMS2P54278 862 aa15.31■□□□□ 0.04
COL11A1-204ENST00000427239 YPEL5P62699 121 aa15.31■□□□□ 0.04
COL11A1-204ENST00000427239 RACK1P63244 317 aaKnown RBP15.31■□□□□ 0.04
COL11A1-204ENST00000427239 ATP13A5Q4VNC0 1218 aa15.31■□□□□ 0.04
COL11A1-204ENST00000427239 FASTKD1Q53R41 847 aaKnown RBP15.31■□□□□ 0.04
COL11A1-204ENST00000427239 MRNIPQ6NTE8 343 aa15.31■□□□□ 0.04
COL11A1-204ENST00000427239 NEPROQ6NW34 567 aa15.31■□□□□ 0.04
COL11A1-204ENST00000427239 ZNF449Q6P9G9 518 aa15.31■□□□□ 0.04
COL11A1-204ENST00000427239 ADAMTSL4Q6UY14 1074 aa15.31■□□□□ 0.04
COL11A1-204ENST00000427239 CERS6Q6ZMG9 384 aa15.31■□□□□ 0.04
COL11A1-204ENST00000427239 GSPT2Q8IYD1 628 aaKnown RBP15.31■□□□□ 0.04
COL11A1-204ENST00000427239 PLA2G15Q8NCC3 412 aa15.31■□□□□ 0.04
COL11A1-204ENST00000427239 CALML6Q8TD86 181 aa15.31■□□□□ 0.04
COL11A1-204ENST00000427239 BMFQ96LC9 184 aa15.31■□□□□ 0.04
COL11A1-204ENST00000427239 TTC1Q99614 292 aa15.31■□□□□ 0.04
COL11A1-204ENST00000427239 CDC42EP4Q9H3Q1 356 aaKnown RBP15.31■□□□□ 0.04
COL11A1-204ENST00000427239 SEMA4AQ9H3S1 761 aa15.31■□□□□ 0.04
COL11A1-204ENST00000427239 PLAC1Q9HBJ0 212 aa15.31■□□□□ 0.04
COL11A1-204ENST00000427239 C20orf96Q9NUD7 363 aaPredicted RBP15.31■□□□□ 0.04
COL11A1-204ENST00000427239 MOCS1Q9NZB8 636 aa15.31■□□□□ 0.04
COL11A1-204ENST00000427239 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.31■□□□□ 0.04
COL11A1-204ENST00000427239 DMDP11532 3685 aa15.31■□□□□ 0.04
COL11A1-204ENST00000427239 K7ESM1 405 aa15.31■□□□□ 0.04
COL11A1-204ENST00000427239 CD3EAPO15446 510 aaKnown RBP15.31■□□□□ 0.04
COL11A1-204ENST00000427239 UGT1A9O60656 530 aa15.31■□□□□ 0.04
COL11A1-204ENST00000427239 ERLIN1O75477 346 aa15.31■□□□□ 0.04
COL11A1-204ENST00000427239 PCCBP05166 539 aa15.31■□□□□ 0.04
COL11A1-204ENST00000427239 HOXC4P09017 264 aaPredicted RBP15.31■□□□□ 0.04
COL11A1-204ENST00000427239 UGT1A6P19224 532 aa15.31■□□□□ 0.04
COL11A1-204ENST00000427239 UGT1A1P22309 533 aa15.31■□□□□ 0.04
COL11A1-204ENST00000427239 UGT1A4P22310 534 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms