RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 SLC31A1O15431 190 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 ESR1P03372 595 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 RUNX1T1Q06455 604 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 C2orf27AQ580R0 203 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 ADCK1Q86TW2 530 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 LDB1Q86U70 411 aaPredicted RBP13.83□□□□□ -0.2
RPL28-202ENST00000426763 GPR135Q8IZ08 494 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 MRPL48Q96GC5 212 aaKnown RBP13.83□□□□□ -0.2
RPL28-202ENST00000426763 TBCDQ9BTW9 1192 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 ENOPH1Q9UHY7 261 aa13.83□□□□□ -0.2
RPL28-202ENST00000426763 DEAF1O75398 565 aaPredicted RBP13.82□□□□□ -0.2
RPL28-202ENST00000426763 BPGMP07738 259 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 ITPKAP23677 461 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 GDPD4Q6W3E5 623 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 ZNF786Q8N393 782 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 ITFG1Q8TB96 612 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 LRRC15Q8TF66 581 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 EPORP19235 508 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 PTGIRP43119 386 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 CDH13P55290 713 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 HTRA3P83110 453 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 IYDQ6PHW0 289 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 MARK4Q96L34 752 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 SGK2Q9HBY8 427 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 ZNF232Q9UNY5 417 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 ZNF711Q9Y462 761 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 CCL22O00626 93 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 LDLRP01130 860 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 TIE1P35590 1138 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 NSG1P42857 185 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 CYP1B1Q16678 543 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 WASHC2DQ5SRD0 308 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 CCDC81Q6ZN84 652 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 VMP1Q96GC9 406 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 POLR3BQ9NW08 1133 aaPredicted RBP13.82□□□□□ -0.2
RPL28-202ENST00000426763 MTF2Q9Y483 593 aaPredicted RBP13.82□□□□□ -0.2
RPL28-202ENST00000426763 TRAFD1O14545 582 aaPredicted RBP13.82□□□□□ -0.2
RPL28-202ENST00000426763 STK16O75716 305 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 IPO13O94829 963 aaKnown RBP13.82□□□□□ -0.2
RPL28-202ENST00000426763 CBX6O95503 412 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 KRT75O95678 551 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 PROCP04070 461 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 LINC00032P0C843 101 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 IFNGR2P38484 337 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 CLK1P49759 484 aaKnown RBP13.82□□□□□ -0.2
RPL28-202ENST00000426763 GDF10P55107 478 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 PRKG2Q13237 762 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 CUZD1Q86UP6 607 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 PCDH20Q8N6Y1 951 aaKnown RBP13.82□□□□□ -0.2
RPL28-202ENST00000426763 GFM2Q969S9 779 aaKnown RBP13.82□□□□□ -0.2
RPL28-202ENST00000426763 RNF145Q96MT1 663 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 KLHL4Q9C0H6 718 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 GNEQ9Y223 722 aaKnown RBP13.82□□□□□ -0.2
RPL28-202ENST00000426763 PLLPQ9Y342 182 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 TRAF6Q9Y4K3 522 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 SRRM3A6NNA2 597 aaPredicted RBP13.82□□□□□ -0.2
RPL28-202ENST00000426763 SNX3O60493 162 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 NTRK1P04629 796 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 PSMC3P17980 439 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 MAT2AP31153 395 aaKnown RBP13.82□□□□□ -0.2
RPL28-202ENST00000426763 KCTD19Q17RG1 926 aaPredicted RBP13.82□□□□□ -0.2
RPL28-202ENST00000426763 KIAA0930Q6ICG6 404 aaPredicted RBP13.82□□□□□ -0.2
RPL28-202ENST00000426763 MSANTD2Q6P1R3 559 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 GPR180Q86V85 440 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 MPP5Q8N3R9 675 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 RNF148Q8N7C7 305 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 AARSD1Q9BTE6 412 aaKnown RBP13.82□□□□□ -0.2
RPL28-202ENST00000426763 CDH19Q9H159 772 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 WNT6Q9Y6F9 365 aa13.82□□□□□ -0.2
RPL28-202ENST00000426763 ITGB4P16144 1822 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 IDO1P14902 403 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 CCR4P51679 360 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 SMYD5Q6GMV2 418 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 ZFP1Q6P2D0 407 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 ZNF549Q6P9A3 640 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 TMEM220Q6QAJ8 160 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 INTS10Q9NVR2 710 aaKnown RBP13.81□□□□□ -0.2
RPL28-202ENST00000426763 GABRDO14764 452 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 FAM155BO75949 473 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 PSMA3P25788 255 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 MTHFRP42898 656 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 LSM12Q3MHD2 195 aaKnown RBP13.81□□□□□ -0.2
RPL28-202ENST00000426763 SNAP47Q5SQN1 464 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 ADGRD1Q6QNK2 874 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 TMPRSS11BQ86T26 416 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 NXNL1Q96CM4 212 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 VPS4AQ9UN37 437 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 NR2E1Q9Y466 385 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 RECQL5O94762 991 aaPredicted RBP13.81□□□□□ -0.2
RPL28-202ENST00000426763 HLA-DQB2P05538 268 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 RPIAP49247 311 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 ARSIQ5FYB1 569 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 FGD3Q5JSP0 725 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 ANXA8L1Q5VT79 327 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 ZSCAN18Q8TBC5 510 aaPredicted RBP13.81□□□□□ -0.2
RPL28-202ENST00000426763 CRYGNQ8WXF5 182 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 NPY6RQ99463 290 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 ZNF780BQ9Y6R6 833 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 EDDM13A0A1B0GTR0 161 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 SAC3D1A6NKF1 404 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms