RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 ALG9Q9H6U8 611 aa26.38■■□□□ 1.81
LDB1-202ENST00000425280 TXLNGQ9NUQ3 528 aa26.38■■□□□ 1.81
LDB1-202ENST00000425280 DZANK1Q9NVP4 752 aa26.38■■□□□ 1.81
LDB1-202ENST00000425280 CDH23Q9H251 3354 aa26.38■■□□□ 1.81
LDB1-202ENST00000425280 WASH3PC4AMC7 463 aa26.38■■□□□ 1.81
LDB1-202ENST00000425280 FCHO1O14526 889 aa26.38■■□□□ 1.81
LDB1-202ENST00000425280 ZBTB14O43829 449 aa26.38■■□□□ 1.81
LDB1-202ENST00000425280 ADH1CP00326 375 aa26.38■■□□□ 1.81
LDB1-202ENST00000425280 T-ENOLP0DO92 83 aa26.38■■□□□ 1.81
LDB1-202ENST00000425280 KCNA5P22460 613 aa26.38■■□□□ 1.81
LDB1-202ENST00000425280 DGKGP49619 791 aa26.38■■□□□ 1.81
LDB1-202ENST00000425280 CRTC1Q6UUV9 634 aa26.38■■□□□ 1.81
LDB1-202ENST00000425280 TTC7BQ86TV6 843 aa26.38■■□□□ 1.81
LDB1-202ENST00000425280 PTERQ96BW5 349 aa26.38■■□□□ 1.81
LDB1-202ENST00000425280 CDCA3Q99618 268 aaPredicted RBP26.38■■□□□ 1.81
LDB1-202ENST00000425280 CDH19Q9H159 772 aa26.38■■□□□ 1.81
LDB1-202ENST00000425280 ZNF106Q9H2Y7 1883 aaKnown RBP26.38■■□□□ 1.81
LDB1-202ENST00000425280 TTC34A8MYJ7 566 aa26.37■■□□□ 1.81
LDB1-202ENST00000425280 ARSAP15289 507 aa26.37■■□□□ 1.81
LDB1-202ENST00000425280 BPIP17213 487 aa26.37■■□□□ 1.81
LDB1-202ENST00000425280 TARSP26639 723 aaKnown RBP26.37■■□□□ 1.81
LDB1-202ENST00000425280 PTGER3P43115 390 aa26.37■■□□□ 1.81
LDB1-202ENST00000425280 KCNC1P48547 511 aa26.37■■□□□ 1.81
LDB1-202ENST00000425280 SEMG2Q02383 582 aa26.37■■□□□ 1.81
LDB1-202ENST00000425280 ARL13AQ5H913 290 aaPredicted RBP26.37■■□□□ 1.81
LDB1-202ENST00000425280 PAQR3Q6TCH7 311 aa26.37■■□□□ 1.81
LDB1-202ENST00000425280 TPRG1Q6ZUI0 275 aa26.37■■□□□ 1.81
LDB1-202ENST00000425280 PPM1EQ8WY54 764 aa26.37■■□□□ 1.81
LDB1-202ENST00000425280 NMUR2Q9GZQ4 415 aa26.37■■□□□ 1.81
LDB1-202ENST00000425280 STN1Q9H668 368 aaKnown RBP26.37■■□□□ 1.81
LDB1-202ENST00000425280 IL26Q9NPH9 171 aa26.37■■□□□ 1.81
LDB1-202ENST00000425280 OAS3Q9Y6K5 1087 aaKnown RBP26.37■■□□□ 1.81
LDB1-202ENST00000425280 A8MT66 165 aa26.37■■□□□ 1.81
LDB1-202ENST00000425280 H0YHG0 523 aa26.37■■□□□ 1.81
LDB1-202ENST00000425280 RFXAPO00287 272 aa26.37■■□□□ 1.81
LDB1-202ENST00000425280 PRAMEF1O95521 474 aa26.37■■□□□ 1.81
LDB1-202ENST00000425280 RAB30Q15771 203 aa26.37■■□□□ 1.81
LDB1-202ENST00000425280 USP45Q70EL2 814 aa26.37■■□□□ 1.81
LDB1-202ENST00000425280 LSMEM2Q8N112 164 aa26.37■■□□□ 1.81
LDB1-202ENST00000425280 GRIN3AQ8TCU5 1115 aa26.37■■□□□ 1.81
LDB1-202ENST00000425280 ZFYVE19Q96K21 471 aa26.37■■□□□ 1.81
LDB1-202ENST00000425280 MCCC1Q96RQ3 725 aaPredicted RBP26.37■■□□□ 1.81
LDB1-202ENST00000425280 GPR21Q99679 349 aa26.37■■□□□ 1.81
LDB1-202ENST00000425280 ILKAPQ9H0C8 392 aaPredicted RBP26.37■■□□□ 1.81
LDB1-202ENST00000425280 SAR1AQ9NR31 198 aa26.37■■□□□ 1.81
LDB1-202ENST00000425280 DNAJC28Q9NX36 388 aa26.37■■□□□ 1.81
LDB1-202ENST00000425280 GALPQ9UBC7 116 aa26.37■■□□□ 1.81
LDB1-202ENST00000425280 TRIM33Q9UPN9 1127 aa26.37■■□□□ 1.81
LDB1-202ENST00000425280 RAP2CQ9Y3L5 183 aa26.37■■□□□ 1.81
LDB1-202ENST00000425280 ATP5HO75947 161 aa26.36■■□□□ 1.81
LDB1-202ENST00000425280 MPSTP25325 297 aa26.36■■□□□ 1.81
LDB1-202ENST00000425280 RECQLP46063 649 aaPredicted RBP26.36■■□□□ 1.81
LDB1-202ENST00000425280 ADARP55265 1226 aaKnown RBP26.36■■□□□ 1.81
LDB1-202ENST00000425280 TUBB3Q13509 450 aa26.36■■□□□ 1.81
LDB1-202ENST00000425280 GDPD4Q6W3E5 623 aa26.36■■□□□ 1.81
LDB1-202ENST00000425280 TRIM67Q6ZTA4 783 aa26.36■■□□□ 1.81
LDB1-202ENST00000425280 GET4Q7L5D6 327 aaPredicted RBP26.36■■□□□ 1.81
LDB1-202ENST00000425280 STK40Q8N2I9 435 aa26.36■■□□□ 1.81
LDB1-202ENST00000425280 CCNYL1Q8N7R7 359 aa26.36■■□□□ 1.81
LDB1-202ENST00000425280 TBRG4Q969Z0 631 aaKnown RBP eCLIP26.36■■□□□ 1.81
LDB1-202ENST00000425280 CCDC126Q96EE4 140 aa26.36■■□□□ 1.81
LDB1-202ENST00000425280 RILPQ96NA2 401 aa26.36■■□□□ 1.81
LDB1-202ENST00000425280 CIPCQ9C0C6 399 aa26.36■■□□□ 1.81
LDB1-202ENST00000425280 SLC28A3Q9HAS3 691 aa26.36■■□□□ 1.81
LDB1-202ENST00000425280 SYTL2Q9HCH5 934 aa26.36■■□□□ 1.81
LDB1-202ENST00000425280 CYP4F12Q9HCS2 524 aa26.36■■□□□ 1.81
LDB1-202ENST00000425280 H3BMM5 538 aa26.35■■□□□ 1.81
LDB1-202ENST00000425280 NPHS1O60500 1241 aa26.35■■□□□ 1.81
LDB1-202ENST00000425280 CBX6O95503 412 aa26.35■■□□□ 1.81
LDB1-202ENST00000425280 CA5AP35218 305 aa26.35■■□□□ 1.81
LDB1-202ENST00000425280 IDH3AP50213 366 aa26.35■■□□□ 1.81
LDB1-202ENST00000425280 CERS6Q6ZMG9 384 aa26.35■■□□□ 1.81
LDB1-202ENST00000425280 ASRGL1Q7L266 308 aa26.35■■□□□ 1.81
LDB1-202ENST00000425280 CBARPQ8N350 705 aaPredicted RBP26.35■■□□□ 1.81
LDB1-202ENST00000425280 ST13P5Q8NFI4 369 aaPredicted RBP26.35■■□□□ 1.81
LDB1-202ENST00000425280 P2RY12Q9H244 342 aa26.35■■□□□ 1.81
LDB1-202ENST00000425280 HAO1Q9UJM8 370 aa26.35■■□□□ 1.81
LDB1-202ENST00000425280 APPL1Q9UKG1 709 aa26.35■■□□□ 1.81
LDB1-202ENST00000425280 CEP290O15078 2479 aa26.35■■□□□ 1.81
LDB1-202ENST00000425280 NIPSNAP2O75323 286 aa26.35■■□□□ 1.81
LDB1-202ENST00000425280 IPO13O94829 963 aaKnown RBP26.35■■□□□ 1.81
LDB1-202ENST00000425280 ATP5BP06576 529 aaKnown RBP26.35■■□□□ 1.81
LDB1-202ENST00000425280 CD9P21926 228 aa26.35■■□□□ 1.81
LDB1-202ENST00000425280 LRRC66Q68CR7 880 aa26.35■■□□□ 1.81
LDB1-202ENST00000425280 PIWIL4Q7Z3Z4 852 aaKnown RBP26.35■■□□□ 1.81
LDB1-202ENST00000425280 SNX20Q7Z614 316 aa26.35■■□□□ 1.81
LDB1-202ENST00000425280 GPR149Q86SP6 731 aa26.35■■□□□ 1.81
LDB1-202ENST00000425280 WFIKKN2Q8TEU8 576 aa26.35■■□□□ 1.81
LDB1-202ENST00000425280 KLHL32Q96NJ5 620 aa26.35■■□□□ 1.81
LDB1-202ENST00000425280 HEPHQ9BQS7 1158 aa26.35■■□□□ 1.81
LDB1-202ENST00000425280 EBF3Q9H4W6 596 aa26.35■■□□□ 1.81
LDB1-202ENST00000425280 HEPACAM2A8MVW5 462 aa26.34■■□□□ 1.81
LDB1-202ENST00000425280 TULP3O75386 442 aa26.34■■□□□ 1.81
LDB1-202ENST00000425280 VPS26AO75436 327 aa26.34■■□□□ 1.81
LDB1-202ENST00000425280 PYGLP06737 847 aa26.34■■□□□ 1.81
LDB1-202ENST00000425280 NNMTP40261 264 aa26.34■■□□□ 1.81
LDB1-202ENST00000425280 NFATC2Q13469 925 aa26.34■■□□□ 1.81
LDB1-202ENST00000425280 FAM91A1Q658Y4 838 aa26.34■■□□□ 1.81
LDB1-202ENST00000425280 GRAMD4Q6IC98 578 aa26.34■■□□□ 1.81
LDB1-202ENST00000425280 SERPINA9Q86WD7 417 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms