RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 USP22Q9UPT9 525 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 MRPS7Q9Y2R9 242 aaKnown RBP3.74□□□□□ -1.81
SF3B1-205ENST00000424674 COPG1Q9Y678 874 aaKnown RBP3.74□□□□□ -1.81
SF3B1-205ENST00000424674 TEX264Q9Y6I9 313 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 MAP3K19Q56UN5 1328 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 CENPJQ9HC77 1338 aaPredicted RBP3.73□□□□□ -1.81
SF3B1-205ENST00000424674 UNC13AQ9UPW8 1703 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 EDDM13A0A1B0GTR0 161 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 GXYLT2A0PJZ3 443 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 PRSS29PA6NIE9 313 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 LRRC53A6NM62 1247 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 ZNF785A8K8V0 405 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 PPEF2O14830 753 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 ATP2A1O14983 1001 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 RANBP6O60518 1105 aaKnown RBP3.73□□□□□ -1.81
SF3B1-205ENST00000424674 MITFO75030 526 aaPredicted RBP3.73□□□□□ -1.81
SF3B1-205ENST00000424674 ZC3H11AO75152 810 aaKnown RBP eCLIP3.73□□□□□ -1.81
SF3B1-205ENST00000424674 NDUFS3O75489 264 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 CIB2O75838 187 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 SLCO2B1O94956 709 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 HEXIM1O94992 359 aaKnown RBP3.73□□□□□ -1.81
SF3B1-205ENST00000424674 IL1AP01583 271 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 FGF4P08620 206 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 VIMP08670 466 aaKnown RBP3.73□□□□□ -1.81
SF3B1-205ENST00000424674 ACP5P13686 325 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 ITIH1P19827 911 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 HNRNPA2B1P22626 353 aaKnown RBP3.73□□□□□ -1.81
SF3B1-205ENST00000424674 PCSK1P29120 753 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 ARHGAP25P42331 645 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 MAGEA8P43361 318 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 CAMPP49913 170 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 NAGLUP54802 743 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 HADHBP55084 474 aaKnown RBP3.73□□□□□ -1.81
SF3B1-205ENST00000424674 SP2Q02086 613 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 COL10A1Q03692 680 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 CEBPZQ03701 1054 aaKnown RBP3.73□□□□□ -1.81
SF3B1-205ENST00000424674 SLFN5Q08AF3 891 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 OVGP1Q12889 678 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 PPIGQ13427 754 aaKnown RBP eCLIP3.73□□□□□ -1.812e-10■□□□□ 10.5
SF3B1-205ENST00000424674 PGM5Q15124 567 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 PTPAQ15257 358 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 RBBP5Q15291 538 aaKnown RBP3.73□□□□□ -1.81
SF3B1-205ENST00000424674 CLPPQ16740 277 aaPredicted RBP3.73□□□□□ -1.81
SF3B1-205ENST00000424674 ZSCAN23Q3MJ62 389 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 LRIT3Q3SXY7 679 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 MGAT5BQ3V5L5 792 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 AARDQ4LEZ3 155 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 TIGD2Q4W5G0 525 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 KLHL26Q53HC5 615 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 C1orf185Q5T7R7 199 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 FAM160B1Q5W0V3 765 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 KRT39Q6A163 491 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 RAET1GQ6H3X3 334 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 NOTUMQ6P988 496 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 GLDNQ6ZMI3 551 aaPredicted RBP3.73□□□□□ -1.81
SF3B1-205ENST00000424674 TRIM72Q6ZMU5 477 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 TRAPPC11Q7Z392 1133 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 ZNF575Q86XF7 245 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 PSTKQ8IV42 348 aaKnown RBP3.73□□□□□ -1.81
SF3B1-205ENST00000424674 MFN1Q8IWA4 741 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 ZNF679Q8IYX0 411 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 LILRA3Q8N6C8 439 aaPredicted RBP3.73□□□□□ -1.81
SF3B1-205ENST00000424674 EIF1ADQ8N9N8 165 aaKnown RBP3.73□□□□□ -1.81
SF3B1-205ENST00000424674 SLC9A6Q92581 669 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 DNASE1L2Q92874 299 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 PHF21BQ96EK2 531 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 HS6ST2Q96MM7 605 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 NUDCD1Q96RS6 583 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 USP28Q96RU2 1077 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 CRAMP1Q96RY5 1269 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 CCT7Q99832 543 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 DDX50Q9BQ39 737 aaKnown RBP3.73□□□□□ -1.81
SF3B1-205ENST00000424674 MESP1Q9BRJ9 268 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 INPP5KQ9BT40 448 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 C1QTNF1Q9BXJ1 281 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 TLR10Q9BXR5 811 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 MOV10L1Q9BXT6 1211 aaKnown RBP3.73□□□□□ -1.81
SF3B1-205ENST00000424674 RTN4RQ9BZR6 473 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 TRIM2Q9C040 744 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 PNNQ9H307 717 aaKnown RBP3.73□□□□□ -1.81
SF3B1-205ENST00000424674 EPHX3Q9H6B9 360 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 HAUS4Q9H6D7 363 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 GORASP2Q9H8Y8 452 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 PARVGQ9HBI0 331 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 PIH1D3Q9NQM4 214 aaKnown RBP3.73□□□□□ -1.81
SF3B1-205ENST00000424674 UBAP1Q9NZ09 502 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 GDE1Q9NZC3 331 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 DLGAP2Q9P1A6 1054 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 DNMT3BQ9UBC3 853 aaKnown RBP3.73□□□□□ -1.81
SF3B1-205ENST00000424674 TRMT6Q9UJA5 497 aaKnown RBP3.73□□□□□ -1.81
SF3B1-205ENST00000424674 AGO2Q9UKV8 859 aaKnown RBP3.73□□□□□ -1.81
SF3B1-205ENST00000424674 MKLN1Q9UL63 735 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 CDY1Q9Y6F8 540 aa3.73□□□□□ -1.81
SF3B1-205ENST00000424674 ACEP12821 1306 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 C15orf38-AP3S2A0A0A6YYH1 394 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 CFAP73A6NFT4 308 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 TMCO5BA8MYB1 307 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 PRR5-ARHGAP8B1AHC4 643 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 E9PI62 339 aa3.72□□□□□ -1.81
SF3B1-205ENST00000424674 F8WDY8 70 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms