RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 CNTN4Q8IWV2 1026 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 LMNTD2Q8IXW0 634 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 CNBD2Q96M20 576 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 C17orf80Q9BSJ5 609 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 AURKCQ9UQB9 309 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 ANKRD6Q9Y2G4 727 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 ARHGAP10A1A4S6 786 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 TMEM114B3SHH9 223 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 H3BNC9 293 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 PSMD12O00232 456 aaPredicted RBP11.88□□□□□ -0.51
PTPRN-204ENST00000423636 RFPL2O75678 378 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 RPP40O75818 363 aaKnown RBP11.88□□□□□ -0.51
PTPRN-204ENST00000423636 CD160O95971 181 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 LINGO3P0C6S8 592 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 THRAP10827 490 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 ATP6V1B1P15313 513 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 ZNF37AP17032 561 aaPredicted RBP11.88□□□□□ -0.51
PTPRN-204ENST00000423636 PRKAA2P54646 552 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 IRF5Q13568 498 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 RPS6KA2Q15349 733 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 ZNF648Q5T619 568 aaPredicted RBP11.88□□□□□ -0.51
PTPRN-204ENST00000423636 MRNIPQ6NTE8 343 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 BBS7Q8IWZ6 715 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 SLC22A15Q8IZD6 547 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 GRIN3AQ8TCU5 1115 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 BRSK1Q8TDC3 778 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 ACTRT2Q8TDY3 377 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 PPWD1Q96BP3 646 aaKnown RBP11.88□□□□□ -0.51
PTPRN-204ENST00000423636 LINGO1Q96FE5 620 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 ECSITQ9BQ95 431 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 TUBB1Q9H4B7 451 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 CD274Q9NZQ7 290 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 ZNHIT2Q9UHR6 403 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 MED16Q9Y2X0 877 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 HCFC2Q9Y5Z7 792 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 IGLV3-10A0A075B6K4 115 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 INPPL1O15357 1258 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 CCL16O15467 120 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 HNRNPCL1O60812 293 aaKnown RBP11.88□□□□□ -0.51
PTPRN-204ENST00000423636 ECI2O75521 394 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 MTHFD2P13995 350 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 HGFP14210 728 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 GCKP35557 465 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 SETMARQ53H47 684 aaPredicted RBP11.88□□□□□ -0.51
PTPRN-204ENST00000423636 ZNF678Q5SXM1 525 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 C6orf52Q5T4I8 152 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 CXorf57Q6NSI4 855 aaKnown RBP11.88□□□□□ -0.51
PTPRN-204ENST00000423636 DNAJC14Q6Y2X3 702 aaPredicted RBP11.88□□□□□ -0.51
PTPRN-204ENST00000423636 DHDDSQ86SQ9 333 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 LILRA2Q8N149 483 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 ARHGAP18Q8N392 663 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 CEP70Q8NHQ1 597 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 LKAAEAR1Q8TD35 194 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 CORO1BQ9BR76 489 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 ZBTB26Q9HCK0 441 aa11.88□□□□□ -0.51
PTPRN-204ENST00000423636 MBD1Q9UIS9 605 aaPredicted RBP11.88□□□□□ -0.51
PTPRN-204ENST00000423636 PIKFYVEQ9Y2I7 2098 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 DRGXA6NNA5 263 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 ZNF839A8K0R7 811 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 NDST3O95803 873 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 SLC7A2P52569 658 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 NRG1Q02297 640 aaPredicted RBP11.87□□□□□ -0.51
PTPRN-204ENST00000423636 PARP15Q460N3 678 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 IL23RQ5VWK5 629 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 MILR1Q7Z6M3 343 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 CLHC1Q8NHS4 586 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 CALML6Q8TD86 181 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 FOXJ1Q92949 421 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 UBXN10Q96LJ8 280 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 TMEM74Q96NL1 305 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 PKP2Q99959 881 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 PRKD2Q9BZL6 878 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 MFSD1Q9H3U5 465 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 PDFQ9HBH1 243 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 TMEM39AQ9NV64 488 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 SEPT3Q9UH03 358 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 VPS51Q9UID3 782 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 ANGPTL2Q9UKU9 493 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 SUFUQ9UMX1 484 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 PRORSD1PA6NEY8 169 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 ANKRD66B4E2M5 251 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 TEX28O15482 410 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 CLCN5P51795 746 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 PFKPQ01813 784 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 DSG1Q02413 1049 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 PPP1R8Q12972 351 aaKnown RBP11.87□□□□□ -0.51
PTPRN-204ENST00000423636 RETREG3Q86VR2 466 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 MFN1Q8IWA4 741 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 FBXO39Q8N4B4 442 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 PRDM16Q9HAZ2 1276 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 HACD3Q9P035 362 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 CFAP97Q9P2B7 532 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 PRSS21Q9Y6M0 314 aa11.87□□□□□ -0.51
PTPRN-204ENST00000423636 A0A087X1B8 175 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 C1orf232A0A0U1RR37 186 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 SMIM24O75264 130 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 OR4F21O95013 312 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 MTHFD1P11586 935 aaKnown RBP11.86□□□□□ -0.51
PTPRN-204ENST00000423636 CD70P32970 193 aa11.86□□□□□ -0.51
PTPRN-204ENST00000423636 STC1P52823 247 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms