RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 HLA-DPA1P20036 260 aa26.26■■□□□ 1.79
CDK9-202ENST00000421939 CHRNA4P43681 627 aa26.26■■□□□ 1.79
CDK9-202ENST00000421939 GEMP55040 296 aa26.26■■□□□ 1.79
CDK9-202ENST00000421939 CLDN6P56747 220 aa26.26■■□□□ 1.79
CDK9-202ENST00000421939 DCDC1P59894 354 aa26.26■■□□□ 1.79
CDK9-202ENST00000421939 E2F1Q01094 437 aa26.26■■□□□ 1.79
CDK9-202ENST00000421939 SIRPB2Q5JXA9 342 aa26.26■■□□□ 1.79
CDK9-202ENST00000421939 GUSBP11Q6P575 273 aa26.26■■□□□ 1.79
CDK9-202ENST00000421939 TMC3Q7Z5M5 1100 aa26.26■■□□□ 1.79
CDK9-202ENST00000421939 ARL10Q8N8L6 244 aa26.26■■□□□ 1.79
CDK9-202ENST00000421939 CCDC110Q8TBZ0 833 aa26.26■■□□□ 1.79
CDK9-202ENST00000421939 IFI44Q8TCB0 444 aa26.26■■□□□ 1.79
CDK9-202ENST00000421939 COX14Q96I36 57 aa26.26■■□□□ 1.79
CDK9-202ENST00000421939 GORASP1Q9BQQ3 440 aa26.26■■□□□ 1.79
CDK9-202ENST00000421939 CDH19Q9H159 772 aa26.26■■□□□ 1.79
CDK9-202ENST00000421939 NFKBIL1Q9UBC1 381 aaPredicted RBP26.26■■□□□ 1.79
CDK9-202ENST00000421939 SUFUQ9UMX1 484 aa26.26■■□□□ 1.79
CDK9-202ENST00000421939 GPR34Q9UPC5 381 aa26.26■■□□□ 1.79
CDK9-202ENST00000421939 R3HDM2Q9Y2K5 976 aaKnown RBP26.26■■□□□ 1.79
CDK9-202ENST00000421939 PLXNB3Q9ULL4 1909 aa26.26■■□□□ 1.79
CDK9-202ENST00000421939 TCRBV7S2A1N4TA0A589 114 aa26.25■■□□□ 1.79
CDK9-202ENST00000421939 INPP4BO15327 924 aa26.25■■□□□ 1.79
CDK9-202ENST00000421939 PSMB4P28070 264 aa26.25■■□□□ 1.79
CDK9-202ENST00000421939 GNPDA1P46926 289 aa26.25■■□□□ 1.79
CDK9-202ENST00000421939 POLD2P49005 469 aa26.25■■□□□ 1.79
CDK9-202ENST00000421939 RPS6KA1Q15418 735 aa26.25■■□□□ 1.79
CDK9-202ENST00000421939 SLC1A5Q15758 541 aa26.25■■□□□ 1.79
CDK9-202ENST00000421939 MEI1Q5TIA1 1274 aa26.25■■□□□ 1.79
CDK9-202ENST00000421939 TAF8Q7Z7C8 310 aa26.25■■□□□ 1.79
CDK9-202ENST00000421939 MARCH9Q86YJ5 346 aa26.25■■□□□ 1.79
CDK9-202ENST00000421939 SLC25A41Q8N5S1 370 aa26.25■■□□□ 1.79
CDK9-202ENST00000421939 KYQ8NBH2 561 aa26.25■■□□□ 1.79
CDK9-202ENST00000421939 PTCD2Q8WV60 388 aaKnown RBP26.25■■□□□ 1.79
CDK9-202ENST00000421939 RAD18Q9NS91 495 aa26.25■■□□□ 1.79
CDK9-202ENST00000421939 SIRPGQ9P1W8 387 aa26.25■■□□□ 1.79
CDK9-202ENST00000421939 PPP2R2CQ9Y2T4 447 aa26.25■■□□□ 1.79
CDK9-202ENST00000421939 CPED1A4D0V7 1026 aa26.24■■□□□ 1.79
CDK9-202ENST00000421939 EME2A4GXA9 379 aaPredicted RBP26.24■■□□□ 1.79
CDK9-202ENST00000421939 FADS2P1A8MWK0 482 aa26.24■■□□□ 1.79
CDK9-202ENST00000421939 FUCA1P04066 466 aa26.24■■□□□ 1.79
CDK9-202ENST00000421939 FGF1P05230 155 aa26.24■■□□□ 1.79
CDK9-202ENST00000421939 INSM1Q01101 510 aaPredicted RBP26.24■■□□□ 1.79
CDK9-202ENST00000421939 ALS2CLQ60I27 953 aa26.24■■□□□ 1.79
CDK9-202ENST00000421939 EFL1Q7Z2Z2 1120 aaKnown RBP26.24■■□□□ 1.79
CDK9-202ENST00000421939 SLC35B2Q8TB61 432 aa26.24■■□□□ 1.79
CDK9-202ENST00000421939 NAT6Q93015 286 aa26.24■■□□□ 1.79
CDK9-202ENST00000421939 TRABDQ9H4I3 376 aa26.24■■□□□ 1.79
CDK9-202ENST00000421939 TRNAU1APQ9NX07 287 aaKnown RBP26.24■■□□□ 1.79
CDK9-202ENST00000421939 TMEM98Q9Y2Y6 226 aa26.24■■□□□ 1.79
CDK9-202ENST00000421939 FREM2Q5SZK8 3169 aa26.24■■□□□ 1.79
CDK9-202ENST00000421939 AURKAO14965 403 aa26.23■■□□□ 1.79
CDK9-202ENST00000421939 PROS1P07225 676 aa26.23■■□□□ 1.79
CDK9-202ENST00000421939 JUPP14923 745 aa26.23■■□□□ 1.79
CDK9-202ENST00000421939 ILF3Q12906 894 aaKnown RBP eCLIP26.23■■□□□ 1.79
CDK9-202ENST00000421939 PRPSAP1Q14558 356 aa26.23■■□□□ 1.79
CDK9-202ENST00000421939 GPR26Q8NDV2 337 aa26.23■■□□□ 1.79
CDK9-202ENST00000421939 CCL4L1Q8NHW4 92 aa26.23■■□□□ 1.79
CDK9-202ENST00000421939 SCARF2Q96GP6 870 aaPredicted RBP26.23■■□□□ 1.79
CDK9-202ENST00000421939 PPP1R2P1Q96PQ5 205 aa26.23■■□□□ 1.79
CDK9-202ENST00000421939 FICDQ9BVA6 458 aa26.23■■□□□ 1.79
CDK9-202ENST00000421939 CARD9Q9H257 536 aa26.23■■□□□ 1.79
CDK9-202ENST00000421939 HACD3Q9P035 362 aa26.23■■□□□ 1.79
CDK9-202ENST00000421939 GULP1Q9UBP9 304 aa26.23■■□□□ 1.79
CDK9-202ENST00000421939 CNOT6Q9ULM6 557 aaKnown RBP26.23■■□□□ 1.79
CDK9-202ENST00000421939 AAR2Q9Y312 384 aaKnown RBP26.23■■□□□ 1.79
CDK9-202ENST00000421939 SCN8AQ9UQD0 1980 aa26.22■■□□□ 1.79
CDK9-202ENST00000421939 C5orf60A6NFR6 353 aa26.22■■□□□ 1.79
CDK9-202ENST00000421939 OPA1O60313 960 aa26.22■■□□□ 1.79
CDK9-202ENST00000421939 ZNF569Q5MCW4 686 aa26.22■■□□□ 1.79
CDK9-202ENST00000421939 SLC13A5Q86YT5 568 aaPredicted RBP26.22■■□□□ 1.79
CDK9-202ENST00000421939 TTC30BQ8N4P2 665 aa26.22■■□□□ 1.79
CDK9-202ENST00000421939 FAM71DQ8N9W8 422 aa26.22■■□□□ 1.79
CDK9-202ENST00000421939 FAM46DQ8NEK8 389 aa26.22■■□□□ 1.79
CDK9-202ENST00000421939 TRIM58Q8NG06 486 aa26.22■■□□□ 1.79
CDK9-202ENST00000421939 MAPK15Q8TD08 544 aa26.22■■□□□ 1.79
CDK9-202ENST00000421939 GPBAR1Q8TDU6 330 aa26.22■■□□□ 1.79
CDK9-202ENST00000421939 OR2M4Q96R27 311 aa26.22■■□□□ 1.79
CDK9-202ENST00000421939 ZSCAN5AQ9BUG6 496 aa26.22■■□□□ 1.79
CDK9-202ENST00000421939 SPATA16Q9BXB7 569 aa26.22■■□□□ 1.79
CDK9-202ENST00000421939 GSDMCQ9BYG8 508 aa26.22■■□□□ 1.79
CDK9-202ENST00000421939 PADI4Q9UM07 663 aa26.22■■□□□ 1.79
CDK9-202ENST00000421939 OAS3Q9Y6K5 1087 aaKnown RBP26.22■■□□□ 1.79
CDK9-202ENST00000421939 WDFY3Q8IZQ1 3526 aa26.22■■□□□ 1.79
CDK9-202ENST00000421939 TMEM8BA6NDV4 472 aa26.21■■□□□ 1.79
CDK9-202ENST00000421939 BPIP17213 487 aa26.21■■□□□ 1.79
CDK9-202ENST00000421939 MARK2Q7KZI7 788 aaKnown RBP26.21■■□□□ 1.79
CDK9-202ENST00000421939 TRAM1L1Q8N609 369 aa26.21■■□□□ 1.79
CDK9-202ENST00000421939 BLOC1S5Q8TDH9 187 aa26.21■■□□□ 1.79
CDK9-202ENST00000421939 ATG4AQ8WYN0 398 aa26.21■■□□□ 1.79
CDK9-202ENST00000421939 VPS18Q9P253 973 aa26.21■■□□□ 1.79
CDK9-202ENST00000421939 USP24Q9UPU5 2620 aa26.21■■□□□ 1.79
CDK9-202ENST00000421939 KNTC1P50748 2209 aa26.2■■□□□ 1.79
CDK9-202ENST00000421939 ASXL3Q9C0F0 2248 aa26.2■■□□□ 1.79
CDK9-202ENST00000421939 ASMTLO95671 621 aa26.2■■□□□ 1.78
CDK9-202ENST00000421939 AGTP01019 485 aa26.2■■□□□ 1.78
CDK9-202ENST00000421939 HMGCLP35914 325 aa26.2■■□□□ 1.78
CDK9-202ENST00000421939 ADCY8P40145 1251 aa26.2■■□□□ 1.78
CDK9-202ENST00000421939 PERM1Q5SV97 790 aa26.2■■□□□ 1.78
CDK9-202ENST00000421939 PDPK2PQ6A1A2 396 aa26.2■■□□□ 1.78
CDK9-202ENST00000421939 ARHGEF18Q6ZSZ5 1173 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms