RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 NUS1Q96E22 293 aa12.43□□□□□ -0.42
TMEM53-206ENST00000420706 AGAP2Q99490 1192 aa12.43□□□□□ -0.42
TMEM53-206ENST00000420706 FAM96AQ9H5X1 160 aa12.43□□□□□ -0.42
TMEM53-206ENST00000420706 ASB8Q9H765 288 aa12.43□□□□□ -0.42
TMEM53-206ENST00000420706 EBF2Q9HAK2 575 aa12.43□□□□□ -0.42
TMEM53-206ENST00000420706 ARFGAP3Q9NP61 516 aa12.43□□□□□ -0.42
TMEM53-206ENST00000420706 SMYD2Q9NRG4 433 aa12.43□□□□□ -0.42
TMEM53-206ENST00000420706 IARS2Q9NSE4 1012 aaKnown RBP12.43□□□□□ -0.42
TMEM53-206ENST00000420706 FNDC3AQ9Y2H6 1198 aaKnown RBP12.43□□□□□ -0.42
TMEM53-206ENST00000420706 SLC30A1Q9Y6M5 507 aa12.43□□□□□ -0.42
TMEM53-206ENST00000420706 PLXND1Q9Y4D7 1925 aa12.43□□□□□ -0.42
TMEM53-206ENST00000420706 FAM159BA6NKW6 160 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 AGAP14A8MT82 685 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 METTL12A8MUP2 240 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 CXorf49A8MYA2 514 aaPredicted RBP12.42□□□□□ -0.42
TMEM53-206ENST00000420706 SLC31A1O15431 190 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 CD3EAPO15446 510 aaKnown RBP12.42□□□□□ -0.42
TMEM53-206ENST00000420706 LATO43561 262 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 UGT1A9O60656 530 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 NDUFS2O75306 463 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 IGHV4-34P06331 123 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 PRSS56P0CW18 603 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 UGT1A6P19224 532 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 BCKDHBP21953 392 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 UGT1A1P22309 533 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 UGT1A4P22310 534 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 STX2P32856 288 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 UGT1A3P35503 534 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 UGT1A5P35504 534 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 CDKN1CP49918 316 aaPredicted RBP12.42□□□□□ -0.42
TMEM53-206ENST00000420706 CACNG1Q06432 222 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 THOC5Q13769 683 aaKnown RBP12.42□□□□□ -0.42
TMEM53-206ENST00000420706 SMAD1Q15797 465 aaKnown RBP12.42□□□□□ -0.42
TMEM53-206ENST00000420706 WSCD2Q2TBF2 565 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 KBTBD12Q3ZCT8 623 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 FASTKD1Q53R41 847 aaKnown RBP12.42□□□□□ -0.42
TMEM53-206ENST00000420706 ZRANB3Q5FWF4 1079 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 TEDDM1Q5T9Z0 273 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 ZNF449Q6P9G9 518 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 SLC36A4Q6YBV0 504 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 SNX20Q7Z614 316 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 LMNTD2Q8IXW0 634 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 PELI3Q8N2H9 469 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 GPR150Q8NGU9 434 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 NELL1Q92832 810 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 CENPTQ96BT3 561 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 SPACA7Q96KW9 195 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 LENG8Q96PV6 779 aaPredicted RBP12.42□□□□□ -0.42
TMEM53-206ENST00000420706 KLF6Q99612 283 aaPredicted RBP12.42□□□□□ -0.42
TMEM53-206ENST00000420706 SPATA16Q9BXB7 569 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 PCED1AQ9H1Q7 454 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 ACSS3Q9H6R3 686 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 UGT1A7Q9HAW7 530 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 UGT1A10Q9HAW8 530 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 UGT1A8Q9HAW9 530 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 PPANQ9NQ55 473 aaKnown RBP12.42□□□□□ -0.42
TMEM53-206ENST00000420706 MBNL1Q9NR56 388 aaKnown RBP12.42□□□□□ -0.42
TMEM53-206ENST00000420706 CATSPERZQ9NTU4 200 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 PLXNA2O75051 1894 aa12.42□□□□□ -0.42
TMEM53-206ENST00000420706 ZNF106Q9H2Y7 1883 aaKnown RBP12.42□□□□□ -0.42
TMEM53-206ENST00000420706 TRBV5-4A0A0C4DH59 114 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 FADS2P1A8MWK0 482 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 RAD51BO15315 384 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 MAP3K13O43283 966 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 PIAS1O75925 651 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 FSBPO95073 299 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 PRAMEF1O95521 474 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 SOD1P00441 154 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 ITGALP20701 1170 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 GPR1P46091 355 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 ITGA9Q13797 1035 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 SEMA3AQ14563 771 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 LRRC14Q15048 493 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 GPR33Q49SQ1 333 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 ATP13A5Q4VNC0 1218 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 SETMARQ53H47 684 aaPredicted RBP12.41□□□□□ -0.42
TMEM53-206ENST00000420706 PSAPL1Q6NUJ1 521 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 PNCKQ6P2M8 343 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 TAS2R42Q7RTR8 314 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 LDB1Q86U70 411 aaPredicted RBP12.41□□□□□ -0.42
TMEM53-206ENST00000420706 CNTN4Q8IWV2 1026 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 PIANPQ8IYJ0 282 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 DEFB119Q8N690 84 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 PNPLA1Q8N8W4 532 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 PLA2G15Q8NCC3 412 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 CADM4Q8NFZ8 388 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 CALML6Q8TD86 181 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 ANKRD7Q92527 254 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 CDKL2Q92772 493 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 BIRC7Q96CA5 298 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 CYTH2Q99418 400 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 ZSCAN5AQ9BUG6 496 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 C1QTNF7Q9BXJ2 289 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 FAM126AQ9BYI3 521 aaPredicted RBP12.41□□□□□ -0.42
TMEM53-206ENST00000420706 MARCH4Q9P2E8 410 aaPredicted RBP12.41□□□□□ -0.42
TMEM53-206ENST00000420706 TMPRSS11EQ9UL52 423 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 CNOT6Q9ULM6 557 aaKnown RBP12.41□□□□□ -0.42
TMEM53-206ENST00000420706 HS3ST3A1Q9Y663 406 aa12.41□□□□□ -0.42
TMEM53-206ENST00000420706 KMT2EQ8IZD2 1858 aa12.4□□□□□ -0.42
TMEM53-206ENST00000420706 MUC3AQ02505 3323 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms