RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 MRPS18BQ9Y676 258 aaKnown RBP10.14□□□□□ -0.79
TNFAIP3-202ENST00000420009 RPS6KL1Q9Y6S9 549 aa10.14□□□□□ -0.79
TNFAIP3-202ENST00000420009 MN1Q10571 1320 aaPredicted RBP10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 TTC24A2A3L6 582 aaPredicted RBP10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 A6NCN8 305 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 GOLGA6CA6NDK9 693 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 GOLGA6BA6NDN3 693 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 EEF2KO00418 725 aaKnown RBP10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 PES1O00541 588 aaKnown RBP10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 POLR1CO15160 346 aaPredicted RBP10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 AGFG2O95081 481 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 PEX11BO96011 259 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 PDGFAP04085 211 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 FURINP09958 794 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 ANKRD34CP0C6C1 535 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 GOLGA6DP0CG33 693 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 CYP2A6P11509 494 aaPredicted RBP10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 ERCC2P18074 760 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 TNFAIP3P21580 790 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 KLK7P49862 253 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 RENBPP51606 427 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 COPB1P53618 953 aaKnown RBP10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 PMS2P54278 862 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 EPHA4P54764 986 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 POLR2FP61218 127 aaKnown RBP10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 HHEXQ03014 270 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 SLC10A7Q0GE19 358 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 TRAF2Q12933 501 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 LBRQ14739 615 aaKnown RBP10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 PTPRRQ15256 657 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 CAMK4Q16566 473 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 CA9Q16790 459 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 DPCR1Q3MIW9 517 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 RFLNAQ6ZTI6 216 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 RFX8Q6ZV50 586 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 ASB18Q6ZVZ8 466 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 TRIM74Q86UV6 250 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 TP53INP2Q8IXH6 220 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 PGBD5Q8N414 524 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 GALNT11Q8NCW6 608 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 FNIP1Q8TF40 1166 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 SCRN2Q96FV2 425 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 COX14Q96I36 57 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 ZNF599Q96NL3 588 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 NUDCD1Q96RS6 583 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 MGME1Q9BQP7 344 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 DHX35Q9H5Z1 703 aaKnown RBP10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 PRDM8Q9NQV8 689 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 GOLGA6AQ9NYA3 693 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 PHTF1Q9UMS5 762 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 TMEM98Q9Y2Y6 226 aa10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 PCYT1BQ9Y5K3 369 aaPredicted RBP10.13□□□□□ -0.79
TNFAIP3-202ENST00000420009 TRBV23OR9-2A0A075B6M9 112 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 ANKRD62A6NC57 917 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 DFFAO00273 331 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 RFPL1O75677 317 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 RNF224P0DH78 156 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 ZNF28P17035 718 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 GNLYP22749 145 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 NFKBIAP25963 317 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 EEF1GP26641 437 aaKnown RBP10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 DLSTP36957 453 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 HSPA9P38646 679 aaKnown RBP10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 GPR1P46091 355 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 NFATC2Q13469 925 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 ZNF235Q14590 738 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 TCP11X2Q5H9J9 407 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 FHL5Q5TD97 284 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 CYP4V2Q6ZWL3 525 aaPredicted RBP10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 USP45Q70EL2 814 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 MARK2Q7KZI7 788 aaKnown RBP10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 ZNF765Q7L2R6 523 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 GALNT13Q8IUC8 556 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 SSC4DQ8WTU2 575 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 PDCD6IPQ8WUM4 868 aaKnown RBP10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 NCSTNQ92542 709 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 AP2M1Q96CW1 435 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 PEBP4Q96S96 227 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 KCTD15Q96SI1 283 aaPredicted RBP10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 SNRNP25Q9BV90 132 aaKnown RBP10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 ULBP3Q9BZM4 244 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 ABCG8Q9H221 673 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 EPB41L1Q9H4G0 881 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 NOD2Q9HC29 1040 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 NLRC4Q9NPP4 1024 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 FAM207AQ9NSI2 230 aaPredicted RBP10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 SAMSN1Q9NSI8 373 aaKnown RBP10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 TAB2Q9NYJ8 693 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 TBC1D29Q9UFV1 150 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 CROTQ9UKG9 612 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 POLHQ9Y253 713 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 PPIL1Q9Y3C6 166 aa10.12□□□□□ -0.79
TNFAIP3-202ENST00000420009 A0A0U1RQS6 177 aa10.11□□□□□ -0.79
TNFAIP3-202ENST00000420009 GOLGA6L3A6NEY3 463 aa10.11□□□□□ -0.79
TNFAIP3-202ENST00000420009 LILRA5A6NI73 299 aa10.11□□□□□ -0.79
TNFAIP3-202ENST00000420009 ENO4A6NNW6 628 aa10.11□□□□□ -0.79
TNFAIP3-202ENST00000420009 VPS4BO75351 444 aa10.11□□□□□ -0.79
TNFAIP3-202ENST00000420009 PGLSO95336 258 aa10.11□□□□□ -0.79
TNFAIP3-202ENST00000420009 PPM1FP49593 454 aaPredicted RBP10.11□□□□□ -0.79
TNFAIP3-202ENST00000420009 DPYSQ14117 519 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms