RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 LRRC43Q8N309 656 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 KDM1BQ8NB78 822 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 C1orf131Q8NDD1 294 aaKnown RBP3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 ZNF473Q8WTR7 871 aaKnown RBP3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 TEKT4Q8WW24 435 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 MAIP1Q8WWC4 291 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 RSPH1Q8WYR4 309 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 INPP5DQ92835 1189 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 OTULINQ96BN8 352 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 ZNF653Q96CK0 615 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 RNFT2Q96EX2 444 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 GFM1Q96RP9 751 aaKnown RBP3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 SMC6Q96SB8 1091 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 NAPGQ99747 312 aaPredicted RBP3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 SH3GL2Q99962 352 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 WDR77Q9BQA1 342 aaPredicted RBP3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 CCDC28BQ9BUN5 200 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 HERC2P3Q9BVR0 1158 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 FAM192AQ9GZU8 254 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 GOLPH3LQ9H4A5 285 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 KLHL31Q9H511 634 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 RABEP2Q9H5N1 569 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 PLSCR4Q9NRQ2 329 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 ALKBH4Q9NXW9 302 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 IFT80Q9P2H3 777 aaPredicted RBP3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 FZD10Q9ULW2 581 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 BARX2Q9UMQ3 279 aaPredicted RBP3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 ZNF148Q9UQR1 794 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 TMEM98Q9Y2Y6 226 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 SRPRBQ9Y5M8 271 aaKnown RBP3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 DGKBQ9Y6T7 804 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 MAGI3Q5TCQ9 1506 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 LMTK2Q8IWU2 1503 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 NUP155O75694 1391 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 CDC42BPAQ5VT25 1732 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 TTC37Q6PGP7 1564 aa3.46□□□□□ -1.85
SDCBPP3-201ENST00000419629 PPRC1Q5VV67 1664 aaKnown RBP3.46□□□□□ -1.85
SDCBPP3-201ENST00000419629 OR6C75A6NL08 312 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 E7ENQ6 273 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 BIRC5O15392 142 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 KLK10O43240 276 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 SPRY3O43610 288 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 PIP5K1CO60331 668 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 HSF2BPO75031 334 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 GUCY1B2O75343 617 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 FAM200BP0CF97 657 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 PDHBP11177 359 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 CYP11B2P19099 503 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 TRIM21P19474 475 aaKnown RBP3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 GJB2P29033 226 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 HOXD3P31249 432 aaPredicted RBP3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 HNF1BP35680 557 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 DPP6P42658 865 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 GPD2P43304 727 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 GNAQP50148 359 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 CCNG1P51959 295 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 TMPRSS3P57727 454 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 PHEXP78562 749 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 MRPS25P82663 173 aaKnown RBP3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 UBE3AQ05086 875 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 DSC1Q08554 894 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 TRAF2Q12933 501 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 KEAP1Q14145 624 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 CLPPQ16740 277 aaPredicted RBP3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 SYTL3Q4VX76 610 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 ANKRD20A8PQ5CZ79 823 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 FSCBQ5H9T9 825 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 NAA35Q5VZE5 725 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 KDM7AQ6ZMT4 941 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 C11orf57Q6ZUT1 292 aaPredicted RBP3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 GET4Q7L5D6 327 aaPredicted RBP3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 OTUD6AQ7L8S5 288 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 DHX40Q8IX18 779 aaKnown RBP3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 SYCP3Q8IZU3 236 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 CPXCR1Q8N123 301 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 DNAAF1Q8NEP3 725 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 CFAP61Q8NHU2 1237 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 TMEM163Q8TC26 289 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 ELP5Q8TE02 316 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 HSPH1Q92598 858 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 RILPL2Q969X0 211 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 WBP1Q96G27 269 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 GDAP1L1Q96MZ0 367 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 ZMAT2Q96NC0 199 aaKnown RBP3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 TWNKQ96RR1 684 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 MAK16Q9BXY0 300 aaKnown RBP3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 SEZ6LQ9BYH1 1024 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 DCLK3Q9C098 648 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 XPO4Q9C0E2 1151 aaKnown RBP3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 CTDSP1Q9GZU7 261 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 NACA2Q9H009 215 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 MIS12Q9H081 205 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 C6orf106Q9H6K1 298 aaPredicted RBP3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 PLAC1Q9HBJ0 212 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 DMAP1Q9NPF5 467 aaPredicted RBP3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 RIC8AQ9NPQ8 531 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 IFNKQ9P0W0 207 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 WDR35Q9P2L0 1181 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 IL36RNQ9UBH0 155 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms