RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 ALFQ53S48 1182 aa15.12■□□□□ 0.01
SEMA3B-203ENST00000419007 OVOS1Q6IE37 1185 aa15.12■□□□□ 0.01
SEMA3B-203ENST00000419007 ABRAXAS1Q6UWZ7 409 aa15.12■□□□□ 0.01
SEMA3B-203ENST00000419007 CIR1Q86X95 450 aaPredicted RBP15.12■□□□□ 0.01
SEMA3B-203ENST00000419007 MFSD2AQ8NA29 543 aa15.12■□□□□ 0.01
SEMA3B-203ENST00000419007 SEPT8Q92599 483 aa15.12■□□□□ 0.01
SEMA3B-203ENST00000419007 TEX37Q96LM6 180 aa15.12■□□□□ 0.01
SEMA3B-203ENST00000419007 MYRFLQ96LU7 910 aa15.12■□□□□ 0.01
SEMA3B-203ENST00000419007 RNF145Q96MT1 663 aa15.12■□□□□ 0.01
SEMA3B-203ENST00000419007 MFSD1Q9H3U5 465 aa15.12■□□□□ 0.01
SEMA3B-203ENST00000419007 POLR3BQ9NW08 1133 aaPredicted RBP15.12■□□□□ 0.01
SEMA3B-203ENST00000419007 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.12■□□□□ 0.016e-6■□□□□ 8.7
SEMA3B-203ENST00000419007 SLAMF8Q9P0V8 285 aa15.12■□□□□ 0.01
SEMA3B-203ENST00000419007 RNF112Q9ULX5 631 aa15.12■□□□□ 0.01
SEMA3B-203ENST00000419007 IGLV3-25P01717 112 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 FAM163BP0C2L3 166 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 CCT8P50990 548 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 ADAM17P78536 824 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 TIGD2Q4W5G0 525 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 FGD3Q5JSP0 725 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 PIK3R6Q5UE93 754 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 MANEALQ5VSG8 457 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 MINDY1Q8N5J2 469 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 ACBD6Q9BR61 282 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 NPLQ9BXD5 320 aaPredicted RBP15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 ABI2Q9NYB9 513 aaPredicted RBP15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 TSR3Q9UJK0 312 aaKnown RBP15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 ZNF236Q9UL36 1845 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 HSD17B1P14061 328 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 NAA20P61599 178 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 CLCQ05315 142 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 GRB14Q14449 540 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 RAB39AQ14964 217 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 UPP1Q16831 310 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 SLC36A3Q495N2 470 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 TMTC4Q5T4D3 741 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 LCN8Q6JVE9 175 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 AGMOQ6ZNB7 445 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 KCTD8Q6ZWB6 473 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 SCD5Q86SK9 330 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 PATL1Q86TB9 770 aaKnown RBP15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 MIB1Q86YT6 1006 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 PACRGLQ8N7B6 248 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 GIPC3Q8TF64 312 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 ITFG2Q969R8 447 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 FEM1CQ96JP0 617 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 SEMA3CQ99985 751 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 TRIM62Q9BVG3 475 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 SMOC2Q9H3U7 446 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 SMPD3Q9NY59 655 aaPredicted RBP15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 HACD3Q9P035 362 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 ABCD2Q9UBJ2 740 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 CPA4Q9UI42 421 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 MIA3Q5JRA6 1907 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 CCDC162PA2VCL2 907 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 KPNA6O60684 536 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 RHOBTB1O94844 696 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 ZNF37AP17032 561 aaPredicted RBP15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 RPS9P46781 194 aaKnown RBP15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 MLLT6P55198 1093 aaPredicted RBP15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 TSPY1Q01534 308 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 SLC14A2Q15849 920 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 MRNIPQ6NTE8 343 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 FBXO39Q8N4B4 442 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 ACOX2Q99424 681 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 AP5M1Q9H0R1 490 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 HIPK3Q9H422 1215 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 ARNT2Q9HBZ2 717 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 ANAPC2Q9UJX6 822 aa15.11■□□□□ 0.01
SEMA3B-203ENST00000419007 B4GAT1O43505 415 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 PCNAP12004 261 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 VARSP26640 1264 aaKnown RBP15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 PRDX3P30048 256 aaKnown RBP15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 FMO4P31512 558 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 PSMD7P51665 324 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 SEMA3AQ14563 771 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 ATP6AP1Q15904 470 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 PAGE3Q5JUK9 113 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 ACBD5Q5T8D3 534 aaPredicted RBP15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 LYSMD3Q7Z3D4 306 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 ZNF554Q86TJ5 538 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 RALGPS2Q86X27 583 aaPredicted RBP15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 SDR39U1Q9NRG7 319 aaPredicted RBP15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 PKD2L2Q9NZM6 624 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 PLXNB2O15031 1838 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 H3BMQ9 156 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 LDB2O43679 373 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 NOL3O60936 208 aaKnown RBP15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 LDLRP01130 860 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 ITGB1P05556 798 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 MTHFD2P13995 350 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 IDO1P14902 403 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 UFM1P61960 85 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 BNIP3Q12983 259 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 AARS2Q5JTZ9 985 aaKnown RBP15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 TMEM214Q6NUQ4 689 aaKnown RBP15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 FAM171BQ6P995 826 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 BLOC1S3Q6QNY0 202 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 TRIM74Q86UV6 250 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms