RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 TRABD2BA6NFA1 517 aa20.5■□□□□ 0.87
PKNOX1-202ENST00000418336 F5H423 210 aaPredicted RBP20.5■□□□□ 0.87
PKNOX1-202ENST00000418336 PDE2AO00408 941 aaPredicted RBP20.5■□□□□ 0.87
PKNOX1-202ENST00000418336 DNAJC6O75061 913 aa20.5■□□□□ 0.87
PKNOX1-202ENST00000418336 MT-CO3P00414 261 aa20.5■□□□□ 0.87
PKNOX1-202ENST00000418336 EPOP01588 193 aa20.5■□□□□ 0.87
PKNOX1-202ENST00000418336 RBP3P10745 1247 aa20.5■□□□□ 0.87
PKNOX1-202ENST00000418336 DUSP3P51452 185 aaPredicted RBP20.5■□□□□ 0.87
PKNOX1-202ENST00000418336 PDX1P52945 283 aa20.5■□□□□ 0.87
PKNOX1-202ENST00000418336 DCDC1P59894 354 aa20.5■□□□□ 0.87
PKNOX1-202ENST00000418336 MSLNQ13421 630 aaPredicted RBP20.5■□□□□ 0.87
PKNOX1-202ENST00000418336 PID1Q7Z2X4 250 aa20.5■□□□□ 0.87
PKNOX1-202ENST00000418336 EFL1Q7Z2Z2 1120 aaKnown RBP20.5■□□□□ 0.87
PKNOX1-202ENST00000418336 GKN2Q86XP6 184 aa20.5■□□□□ 0.87
PKNOX1-202ENST00000418336 SYCE1Q8N0S2 351 aa20.5■□□□□ 0.87
PKNOX1-202ENST00000418336 TTC30BQ8N4P2 665 aa20.5■□□□□ 0.87
PKNOX1-202ENST00000418336 GBA3Q9H227 469 aa20.5■□□□□ 0.87
PKNOX1-202ENST00000418336 ZFYVE1Q9HBF4 777 aa20.5■□□□□ 0.87
PKNOX1-202ENST00000418336 PADI4Q9UM07 663 aa20.5■□□□□ 0.87
PKNOX1-202ENST00000418336 SHOC2Q9UQ13 582 aa20.5■□□□□ 0.87
PKNOX1-202ENST00000418336 TMEM98Q9Y2Y6 226 aa20.5■□□□□ 0.87
PKNOX1-202ENST00000418336 PLEKHM1Q9Y4G2 1056 aa20.5■□□□□ 0.87
PKNOX1-202ENST00000418336 H7C0C1 242 aa20.49■□□□□ 0.87
PKNOX1-202ENST00000418336 CTSEP14091 401 aa20.49■□□□□ 0.87
PKNOX1-202ENST00000418336 ADRA1AP35348 466 aa20.49■□□□□ 0.87
PKNOX1-202ENST00000418336 ATP5OP48047 213 aa20.49■□□□□ 0.87
PKNOX1-202ENST00000418336 EIF3EP60228 445 aaKnown RBP20.49■□□□□ 0.87
PKNOX1-202ENST00000418336 SIRPB2Q5JXA9 342 aa20.49■□□□□ 0.87
PKNOX1-202ENST00000418336 PROSER1Q86XN7 944 aa20.49■□□□□ 0.87
PKNOX1-202ENST00000418336 TXLNBQ8N3L3 684 aa20.49■□□□□ 0.87
PKNOX1-202ENST00000418336 MDM1Q8TC05 714 aa20.49■□□□□ 0.87
PKNOX1-202ENST00000418336 ZCCHC14Q8WYQ9 949 aaKnown RBP20.49■□□□□ 0.87
PKNOX1-202ENST00000418336 HIC2Q96JB3 615 aa20.49■□□□□ 0.87
PKNOX1-202ENST00000418336 FAM83DQ9H4H8 585 aa20.49■□□□□ 0.87
PKNOX1-202ENST00000418336 CARS2Q9HA77 564 aaKnown RBP20.49■□□□□ 0.87
PKNOX1-202ENST00000418336 SPATS2LQ9NUQ6 558 aaKnown RBP20.49■□□□□ 0.87
PKNOX1-202ENST00000418336 TRNAU1APQ9NX07 287 aaKnown RBP20.49■□□□□ 0.87
PKNOX1-202ENST00000418336 TMPRSS11EQ9UL52 423 aa20.49■□□□□ 0.87
PKNOX1-202ENST00000418336 GPR34Q9UPC5 381 aa20.49■□□□□ 0.87
PKNOX1-202ENST00000418336 A0A1W2PNU3 283 aaPredicted RBP20.48■□□□□ 0.87
PKNOX1-202ENST00000418336 INPP4BO15327 924 aa20.48■□□□□ 0.87
PKNOX1-202ENST00000418336 TJP3O95049 919 aa20.48■□□□□ 0.87
PKNOX1-202ENST00000418336 BPIP17213 487 aa20.48■□□□□ 0.87
PKNOX1-202ENST00000418336 ADCY8P40145 1251 aa20.48■□□□□ 0.87
PKNOX1-202ENST00000418336 MPP3Q13368 585 aa20.48■□□□□ 0.87
PKNOX1-202ENST00000418336 HLTFQ14527 1009 aaKnown RBP eCLIP20.48■□□□□ 0.87
PKNOX1-202ENST00000418336 SLC1A5Q15758 541 aa20.48■□□□□ 0.87
PKNOX1-202ENST00000418336 PYCR3Q53H96 274 aa20.48■□□□□ 0.87
PKNOX1-202ENST00000418336 ANKRD20A2Q5SQ80 823 aa20.48■□□□□ 0.87
PKNOX1-202ENST00000418336 ANKRD20A1Q5TYW2 823 aa20.48■□□□□ 0.87
PKNOX1-202ENST00000418336 ANKRD20A3Q5VUR7 823 aa20.48■□□□□ 0.87
PKNOX1-202ENST00000418336 CDKL3Q8IVW4 592 aaPredicted RBP20.48■□□□□ 0.87
PKNOX1-202ENST00000418336 UBL4BQ8N7F7 174 aa20.48■□□□□ 0.87
PKNOX1-202ENST00000418336 PDCD7Q8N8D1 485 aaKnown RBP20.48■□□□□ 0.87
PKNOX1-202ENST00000418336 SLC35B2Q8TB61 432 aa20.48■□□□□ 0.87
PKNOX1-202ENST00000418336 PKD2L2Q9NZM6 624 aa20.48■□□□□ 0.87
PKNOX1-202ENST00000418336 CLCA2Q9UQC9 943 aa20.48■□□□□ 0.87
PKNOX1-202ENST00000418336 PKD1L2Q7Z442 2459 aa20.48■□□□□ 0.87
PKNOX1-202ENST00000418336 CPED1A4D0V7 1026 aa20.47■□□□□ 0.87
PKNOX1-202ENST00000418336 GOLGA6CA6NDK9 693 aa20.47■□□□□ 0.87
PKNOX1-202ENST00000418336 GOLGA6BA6NDN3 693 aa20.47■□□□□ 0.87
PKNOX1-202ENST00000418336 NTN3O00634 580 aaPredicted RBP20.47■□□□□ 0.87
PKNOX1-202ENST00000418336 GAPDHSO14556 408 aaPredicted RBP20.47■□□□□ 0.87
PKNOX1-202ENST00000418336 FGF1P05230 155 aa20.47■□□□□ 0.87
PKNOX1-202ENST00000418336 PYGLP06737 847 aa20.47■□□□□ 0.87
PKNOX1-202ENST00000418336 GOLGA6DP0CG33 693 aa20.47■□□□□ 0.87
PKNOX1-202ENST00000418336 JUPP14923 745 aa20.47■□□□□ 0.87
PKNOX1-202ENST00000418336 AK4P27144 223 aaPredicted RBP20.47■□□□□ 0.87
PKNOX1-202ENST00000418336 CA5AP35218 305 aa20.47■□□□□ 0.87
PKNOX1-202ENST00000418336 CTBSQ01459 385 aa20.47■□□□□ 0.87
PKNOX1-202ENST00000418336 OLIG2Q13516 323 aa20.47■□□□□ 0.87
PKNOX1-202ENST00000418336 RTP5Q14D33 572 aa20.47■□□□□ 0.87
PKNOX1-202ENST00000418336 DOK6Q6PKX4 331 aa20.47■□□□□ 0.87
PKNOX1-202ENST00000418336 CCDC112Q8NEF3 446 aa20.47■□□□□ 0.87
PKNOX1-202ENST00000418336 CCHCR1Q8TD31 782 aa20.47■□□□□ 0.87
PKNOX1-202ENST00000418336 GOLGA6AQ9NYA3 693 aa20.47■□□□□ 0.87
PKNOX1-202ENST00000418336 SIRPGQ9P1W8 387 aa20.47■□□□□ 0.87
PKNOX1-202ENST00000418336 VPS18Q9P253 973 aa20.47■□□□□ 0.87
PKNOX1-202ENST00000418336 RSPH14Q9UHP6 348 aa20.47■□□□□ 0.87
PKNOX1-202ENST00000418336 GUCA1BQ9UMX6 200 aa20.47■□□□□ 0.87
PKNOX1-202ENST00000418336 PCDHB1Q9Y5F3 818 aa20.47■□□□□ 0.87
PKNOX1-202ENST00000418336 ZNF106Q9H2Y7 1883 aaKnown RBP20.46■□□□□ 0.87
PKNOX1-202ENST00000418336 SRRM3A6NNA2 597 aaPredicted RBP20.46■□□□□ 0.87
PKNOX1-202ENST00000418336 GOLGA6L6A8MZA4 724 aa20.46■□□□□ 0.87
PKNOX1-202ENST00000418336 AGTP01019 485 aa20.46■□□□□ 0.87
PKNOX1-202ENST00000418336 ATP1A1P05023 1023 aaKnown RBP20.46■□□□□ 0.87
PKNOX1-202ENST00000418336 PSMB4P28070 264 aa20.46■□□□□ 0.87
PKNOX1-202ENST00000418336 HMGCLP35914 325 aa20.46■□□□□ 0.87
PKNOX1-202ENST00000418336 GNPDA1P46926 289 aa20.46■□□□□ 0.87
PKNOX1-202ENST00000418336 GDF10P55107 478 aa20.46■□□□□ 0.87
PKNOX1-202ENST00000418336 MEI1Q5TIA1 1274 aa20.46■□□□□ 0.87
PKNOX1-202ENST00000418336 DENND5AQ6IQ26 1287 aa20.46■□□□□ 0.87
PKNOX1-202ENST00000418336 RANBP10Q6VN20 620 aa20.46■□□□□ 0.87
PKNOX1-202ENST00000418336 TAF8Q7Z7C8 310 aa20.46■□□□□ 0.87
PKNOX1-202ENST00000418336 CCDC110Q8TBZ0 833 aa20.46■□□□□ 0.87
PKNOX1-202ENST00000418336 MAPK15Q8TD08 544 aa20.46■□□□□ 0.87
PKNOX1-202ENST00000418336 GLMNQ92990 594 aa20.46■□□□□ 0.87
PKNOX1-202ENST00000418336 CCDC74AQ96AQ1 378 aa20.46■□□□□ 0.87
PKNOX1-202ENST00000418336 SPATA13Q96N96 652 aa20.46■□□□□ 0.87
PKNOX1-202ENST00000418336 CCDC3Q9BQI4 270 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms