RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 ITGALP20701 1170 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 FMO4P31512 558 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 ARRB2P32121 409 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 GKP32189 559 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 NFKB2Q00653 900 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 GALNT1Q10472 559 aaPredicted RBP16.72■□□□□ 0.27
SSBP3-205ENST00000417664 HSF5Q4G112 596 aaPredicted RBP16.72■□□□□ 0.27
SSBP3-205ENST00000417664 TMEM184AQ6ZMB5 413 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 ISCA2Q86U28 154 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 SPATA6LQ8N4H0 392 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 VN1R2Q8NFZ6 395 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 TRMOQ9BU70 441 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 CERS4Q9HA82 394 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 VTI1BQ9UEU0 232 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 BPTFQ12830 3046 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 CHD7Q9P2D1 2997 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 PRMT5O14744 637 aaPredicted RBP16.71■□□□□ 0.27
SSBP3-205ENST00000417664 HGSO14964 777 aaPredicted RBP16.71■□□□□ 0.27
SSBP3-205ENST00000417664 SERPINA6P08185 405 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 CISD3P0C7P0 127 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 PRSS56P0CW18 603 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 ZNF7P17097 686 aaPredicted RBP16.71■□□□□ 0.27
SSBP3-205ENST00000417664 RPS3P23396 243 aaKnown RBP eCLIP16.71■□□□□ 0.27
SSBP3-205ENST00000417664 SPAM1P38567 509 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 CTC1Q2NKJ3 1217 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 CFAP157Q5JU67 520 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 FAM78AQ5JUQ0 283 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 TMEM215Q68D42 235 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 GDPD4Q6W3E5 623 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 ASRGL1Q7L266 308 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 TAS2R42Q7RTR8 314 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 GPR149Q86SP6 731 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 PIM3Q86V86 326 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 C10orf67Q8IYJ2 551 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 PNPLA1Q8N8W4 532 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 TXNDC5Q8NBS9 432 aaKnown RBP16.71■□□□□ 0.27
SSBP3-205ENST00000417664 OR2A12Q8NGT7 310 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 HCAR2Q8TDS4 363 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 FRS2Q8WU20 508 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 INPP5DQ92835 1189 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 KLHL29Q96CT2 875 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 RILPQ96NA2 401 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 LRRC3BQ96PB8 259 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 HEPHQ9BQS7 1158 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 OSBPL1AQ9BXW6 950 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 NKX2-4Q9H2Z4 354 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 POMKQ9H5K3 350 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 ZDHHC6Q9H6R6 413 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 SLC28A3Q9HAS3 691 aa16.71■□□□□ 0.27
SSBP3-205ENST00000417664 THG1LQ9NWX6 298 aaKnown RBP16.71■□□□□ 0.27
SSBP3-205ENST00000417664 PDE4DIPQ5VU43 2346 aa16.7■□□□□ 0.26
SSBP3-205ENST00000417664 TRBV5-4A0A0C4DH59 114 aa16.7■□□□□ 0.26
SSBP3-205ENST00000417664 H3BMM5 538 aa16.7■□□□□ 0.26
SSBP3-205ENST00000417664 FCHO1O14526 889 aa16.7■□□□□ 0.26
SSBP3-205ENST00000417664 SMIM24O75264 130 aa16.7■□□□□ 0.26
SSBP3-205ENST00000417664 CLDN7O95471 211 aa16.7■□□□□ 0.26
SSBP3-205ENST00000417664 PRAMEF1O95521 474 aa16.7■□□□□ 0.26
SSBP3-205ENST00000417664 TPBGLP0DKB5 382 aa16.7■□□□□ 0.26
SSBP3-205ENST00000417664 CDKN1CP49918 316 aaPredicted RBP16.7■□□□□ 0.26
SSBP3-205ENST00000417664 RPL14P50914 215 aaKnown RBP16.7■□□□□ 0.26
SSBP3-205ENST00000417664 NAA20P61599 178 aa16.7■□□□□ 0.26
SSBP3-205ENST00000417664 NFATC2Q13469 925 aa16.7■□□□□ 0.26
SSBP3-205ENST00000417664 PTPRRQ15256 657 aa16.7■□□□□ 0.26
SSBP3-205ENST00000417664 GEN1Q17RS7 908 aa16.7■□□□□ 0.26
SSBP3-205ENST00000417664 ARL13AQ5H913 290 aaPredicted RBP16.7■□□□□ 0.26
SSBP3-205ENST00000417664 TRIM67Q6ZTA4 783 aa16.7■□□□□ 0.26
SSBP3-205ENST00000417664 Q6ZVU0 165 aa16.7■□□□□ 0.26
SSBP3-205ENST00000417664 ZSWIM9Q86XI8 627 aa16.7■□□□□ 0.26
SSBP3-205ENST00000417664 ZNF781Q8N8C0 355 aa16.7■□□□□ 0.26
SSBP3-205ENST00000417664 NAT16Q8N8M0 369 aa16.7■□□□□ 0.26
SSBP3-205ENST00000417664 KDM1BQ8NB78 822 aa16.7■□□□□ 0.26
SSBP3-205ENST00000417664 GDPD5Q8WTR4 605 aa16.7■□□□□ 0.26
SSBP3-205ENST00000417664 FGF13Q92913 245 aa16.7■□□□□ 0.26
SSBP3-205ENST00000417664 KIAA1191Q96A73 305 aa16.7■□□□□ 0.26
SSBP3-205ENST00000417664 MRPL38Q96DV4 380 aaKnown RBP16.7■□□□□ 0.26
SSBP3-205ENST00000417664 ASIC4Q96FT7 647 aa16.7■□□□□ 0.26
SSBP3-205ENST00000417664 MRGPRX3Q96LB0 322 aa16.7■□□□□ 0.26
SSBP3-205ENST00000417664 P2RY12Q9H244 342 aa16.7■□□□□ 0.26
SSBP3-205ENST00000417664 EML4Q9HC35 981 aaKnown RBP16.7■□□□□ 0.26
SSBP3-205ENST00000417664 PNPOQ9NVS9 261 aa16.7■□□□□ 0.26
SSBP3-205ENST00000417664 LNPEPQ9UIQ6 1025 aa16.7■□□□□ 0.26
SSBP3-205ENST00000417664 MED16Q9Y2X0 877 aa16.7■□□□□ 0.26
SSBP3-205ENST00000417664 GLYATL1P3A0A0U1RQE8 302 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 A8MT66 165 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 ZNF195O14628 629 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 ZNF30P17039 623 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 PDGFRLQ15198 375 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 METTL21CQ5VZV1 264 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 CRTC1Q6UUV9 634 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 ATG14Q6ZNE5 492 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 ETFBKMTQ8IXQ9 262 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 RBFAQ8N0V3 343 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 STAG3L4Q8TBR4 150 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 L3HYPDHQ96EM0 354 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 LRMDAQ9H2I8 198 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 ALG9Q9H6U8 611 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 IL26Q9NPH9 171 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 ARHGEF3Q9NR81 526 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 TRMT6Q9UJA5 497 aaKnown RBP16.69■□□□□ 0.26
SSBP3-205ENST00000417664 ATG2AQ2TAZ0 1938 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms