RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 SV2CQ496J9 727 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 ANKRD20A4Q4UJ75 823 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 CCDC58Q4VC31 144 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 ANKRD20A8PQ5CZ79 823 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 XKR4Q5GH76 650 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 C9orf152Q5JTZ5 239 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 ZNF484Q5JVG2 852 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 ANKRD20A2Q5SQ80 823 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 ANKRD20A1Q5TYW2 823 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 BTBD8Q5XKL5 378 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 HLA-DQA1Q5Y7H0 255 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 MBLAC2Q68D91 279 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 PLA2G4FQ68DD2 849 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 KCTD11Q693B1 232 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 GRAMD4Q6IC98 578 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 PRMT9Q6P2P2 845 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 ABHD17CQ6PCB6 329 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 CYP2R1Q6VVX0 501 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 RFPL4BQ6ZWI9 263 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 FAM122BQ7Z309 247 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 DCXRQ7Z4W1 244 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 AMZ2Q86W34 360 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 GAS2L3Q86XJ1 694 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 SIX6OS1Q8N1H7 587 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 CLEC4FQ8N1N0 589 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 KDM8Q8N371 416 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 KLHL36Q8N4N3 616 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 NATD1Q8N6N6 113 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 NAT16Q8N8M0 369 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 FSIP1Q8NA03 581 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 STEAP2Q8NFT2 490 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 OR2T34Q8NGX1 318 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 OR14C36Q8NHC7 312 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 PSMA8Q8TAA3 256 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 CYP2W1Q8TAV3 490 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 HCAR2Q8TDS4 363 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 STYXQ8WUJ0 223 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 MITD1Q8WV92 249 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 TSEN15Q8WW01 171 aaKnown RBP3.64□□□□□ -1.83
SF3B1-203ENST00000414174 CAPSLQ8WWF8 208 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 SLC44A1Q8WWI5 657 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 RAPGEF4Q8WZA2 1011 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 PIGKQ92643 395 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 PTPRN2Q92932 1015 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 RMND5BQ96G75 393 aaPredicted RBP3.64□□□□□ -1.83
SF3B1-203ENST00000414174 ANKRD36BP1Q96IX9 119 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 SLC41A2Q96JW4 573 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 ABHD1Q96SE0 405 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 ORAI2Q96SN7 254 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 TSC22D3Q99576 134 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 CGRRF1Q99675 332 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 SYT17Q9BSW7 474 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 LGR4Q9BXB1 951 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 BBS2Q9BXC9 721 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 KRTAP3-1Q9BYR8 98 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 OSBPL6Q9BZF3 934 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 TWSG1Q9GZX9 223 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 BLZF1Q9H2G9 400 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 OR51B5Q9H339 312 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 SNX25Q9H3E2 840 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 SLC38A10Q9HBR0 1119 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 RXFP1Q9HBX9 757 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 NT5MQ9NPB1 228 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 MBNL1Q9NR56 388 aaKnown RBP3.64□□□□□ -1.83
SF3B1-203ENST00000414174 TM7SF3Q9NS93 570 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 DNAJC11Q9NVH1 559 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 FBXO34Q9NWN3 711 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 HCFC1R1Q9NWW0 138 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 THG1LQ9NWX6 298 aaKnown RBP3.64□□□□□ -1.83
SF3B1-203ENST00000414174 EURLQ9NYK6 297 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 TAS2R10Q9NYW0 307 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 CNIH4Q9P003 139 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 PSMC3IPQ9P2W1 217 aaPredicted RBP3.64□□□□□ -1.83
SF3B1-203ENST00000414174 MYO1AQ9UBC5 1043 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 CTSFQ9UBX1 484 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 APEX2Q9UBZ4 518 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 KCNN3Q9UGI6 736 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 DCDC2Q9UHG0 476 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 VPS51Q9UID3 782 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 LNPEPQ9UIQ6 1025 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 TSPAN16Q9UKR8 245 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 DNPEPQ9ULA0 475 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 USP18Q9UMW8 372 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 GABRQQ9UN88 632 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 PACSIN2Q9UNF0 486 aaPredicted RBP3.64□□□□□ -1.83
SF3B1-203ENST00000414174 ENTPD4Q9Y227 616 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 ERGIC3Q9Y282 383 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 SLC9A8Q9Y2E8 581 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 DNAJC16Q9Y2G8 782 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 AP3M1Q9Y2T2 418 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 COPG1Q9Y678 874 aaKnown RBP3.64□□□□□ -1.83
SF3B1-203ENST00000414174 NFS1Q9Y697 457 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 RUSC2Q8N2Y8 1516 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 NCAPD3P42695 1498 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 A0A0U1RQS6 177 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 TRBC2A0A5B9 178 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 TRIM49BA6NDI0 452 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 SMCO2A6NFE2 343 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 OR6C70A6NIJ9 312 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 GLOD5A6NK44 160 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms