RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 MPSTP25325 297 aa13.71□□□□□ -0.22
SMARCA4-202ENST00000413806 SLC7A2P52569 658 aa13.71□□□□□ -0.22
SMARCA4-202ENST00000413806 PHC1P78364 1004 aa13.71□□□□□ -0.22
SMARCA4-202ENST00000413806 RALGDSQ12967 914 aa13.71□□□□□ -0.22
SMARCA4-202ENST00000413806 DGKZQ13574 1117 aa13.71□□□□□ -0.22
SMARCA4-202ENST00000413806 GRM3Q14832 879 aa13.71□□□□□ -0.22
SMARCA4-202ENST00000413806 LDLRAP1Q5SW96 308 aa13.71□□□□□ -0.22
SMARCA4-202ENST00000413806 PRAMEF19Q5SWL8 479 aa13.71□□□□□ -0.22
SMARCA4-202ENST00000413806 VSTM1Q6UX27 236 aa13.71□□□□□ -0.22
SMARCA4-202ENST00000413806 NMUR2Q9GZQ4 415 aa13.71□□□□□ -0.22
SMARCA4-202ENST00000413806 ZFP14Q9HCL3 533 aa13.71□□□□□ -0.22
SMARCA4-202ENST00000413806 SIX2Q9NPC8 291 aa13.71□□□□□ -0.22
SMARCA4-202ENST00000413806 ASAH2Q9NR71 780 aa13.71□□□□□ -0.22
SMARCA4-202ENST00000413806 STXBP5LQ9Y2K9 1186 aa13.71□□□□□ -0.22
SMARCA4-202ENST00000413806 PCDHB1Q9Y5F3 818 aa13.71□□□□□ -0.22
SMARCA4-202ENST00000413806 SQORQ9Y6N5 450 aa13.71□□□□□ -0.22
SMARCA4-202ENST00000413806 GNB5O14775 395 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 SEPHS1P49903 392 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 LIMK2P53671 638 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 XKR6Q5GH73 641 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 FRMD7Q6ZUT3 714 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 TBATAQ96M53 351 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 GPATCH1Q9BRR8 931 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 OXCT2Q9BYC2 517 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 DNAJC5Q9H3Z4 198 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 TMEM138Q9NPI0 162 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 EIF2B3Q9NR50 452 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 DGKBQ9Y6T7 804 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 MGRN1O60291 552 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 ASGR1P07306 291 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 TLX1P31314 330 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 TPTEP56180 551 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 BICRALQ6AI39 1079 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 ARHGAP36Q6ZRI8 547 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 DET1Q7L5Y6 550 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 CNTD1Q8N815 330 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 WDR48Q8TAF3 677 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 GRIN3AQ8TCU5 1115 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 B3GNT5Q9BYG0 378 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 CCSER2Q9H7U1 834 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 ZNF232Q9UNY5 417 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 PIK3C2AO00443 1686 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 A0A0J9YYE9 177 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 TLR5O60602 858 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 CLDN11O75508 207 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 CST3P01034 146 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 TSPAN8P19075 237 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 MAPK9P45984 424 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 IDH2P48735 452 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 HLA-DQA1Q5Y7H0 255 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 SLC9A4Q6AI14 798 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 C1orf127Q8N9H9 656 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 FAM47BQ8NA70 645 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 SPPL2BQ8TCT7 592 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 SAGE2PA6NJ88 616 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 AGPSO00116 658 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 APTXQ7Z2E3 356 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 ERLEC1Q96DZ1 483 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 NPAS2Q99743 824 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 CDH22Q9UJ99 828 aa13.7□□□□□ -0.22
SMARCA4-202ENST00000413806 RPTORQ8N122 1335 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 ADSLP30566 484 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 ITGA7Q13683 1181 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 MACC1Q6ZN28 852 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 GATAD2AQ86YP4 633 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 PIK3C3Q8NEB9 887 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 MYO19Q96H55 970 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 AGO3Q9H9G7 860 aaKnown RBP13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 C1QTNF3-AMACRE9PGA6 284 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 DHX15O43143 795 aaKnown RBP13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 TSPAN1O60635 241 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 RHOQP17081 205 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 RAB15P59190 212 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 MBTD1Q05BQ5 628 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 NPY5RQ15761 445 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 LIN54Q6MZP7 749 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 FAM131AQ6UXB0 335 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 ZC3H7AQ8IWR0 971 aaKnown RBP13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 PGAM4Q8N0Y7 254 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 OR52L1Q8NGH7 329 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 AP3S1Q92572 193 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 BRD9Q9H8M2 597 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 GRHL1Q9NZI5 618 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 PCDHGA10Q9Y5H3 936 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 SH3BGRLO75368 114 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 TRIM40Q6P9F5 258 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 CRTC3Q6UUV7 619 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 FAM84AQ96KN4 292 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 SLC38A2Q96QD8 506 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 VPS35Q96QK1 796 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 OR52E6Q96RD3 313 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 COPS8Q99627 209 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 MFHAS1Q9Y4C4 1052 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 POLR3HQ9Y535 204 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 TGFBR2P37173 567 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 GPR1P46091 355 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 GBE1Q04446 702 aa13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 LSM12Q3MHD2 195 aaKnown RBP13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 RBM15BQ8NDT2 890 aaKnown RBP13.69□□□□□ -0.22
SMARCA4-202ENST00000413806 TIFAQ96CG3 184 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms