RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 LZTS3O60299 673 aaPredicted RBP20.12■□□□□ 0.81
PTPA-208ENST00000411917 MMP20O60882 483 aa20.12■□□□□ 0.81
PTPA-208ENST00000411917 CDH16O75309 829 aa20.12■□□□□ 0.81
PTPA-208ENST00000411917 PCDH8O95206 1070 aa20.12■□□□□ 0.81
PTPA-208ENST00000411917 SEMA4FO95754 770 aa20.12■□□□□ 0.81
PTPA-208ENST00000411917 ERVK-10P10266 1014 aa20.12■□□□□ 0.81
PTPA-208ENST00000411917 ETV3P41162 512 aa20.12■□□□□ 0.81
PTPA-208ENST00000411917 LEPRP48357 1165 aaKnown RBP20.12■□□□□ 0.81
PTPA-208ENST00000411917 POLD2P49005 469 aa20.12■□□□□ 0.81
PTPA-208ENST00000411917 SERPINB9P50453 376 aa20.12■□□□□ 0.81
PTPA-208ENST00000411917 ITIH4Q14624 930 aa20.12■□□□□ 0.81
PTPA-208ENST00000411917 ACOX1Q15067 660 aa20.12■□□□□ 0.81
PTPA-208ENST00000411917 FASTKD1Q53R41 847 aaKnown RBP20.12■□□□□ 0.81
PTPA-208ENST00000411917 ADGRD1Q6QNK2 874 aa20.12■□□□□ 0.81
PTPA-208ENST00000411917 SLC36A4Q6YBV0 504 aa20.12■□□□□ 0.81
PTPA-208ENST00000411917 C11orf74Q86VG3 221 aa20.12■□□□□ 0.81
PTPA-208ENST00000411917 CACUL1Q86Y37 369 aa20.12■□□□□ 0.81
PTPA-208ENST00000411917 PGBD3Q8N328 593 aa20.12■□□□□ 0.81
PTPA-208ENST00000411917 FBXL6Q8N531 539 aa20.12■□□□□ 0.81
PTPA-208ENST00000411917 WRAP53Q9BUR4 548 aaKnown RBP20.12■□□□□ 0.81
PTPA-208ENST00000411917 ABCG8Q9H221 673 aa20.12■□□□□ 0.81
PTPA-208ENST00000411917 ACBD3Q9H3P7 528 aa20.12■□□□□ 0.81
PTPA-208ENST00000411917 BPIFA1Q9NP55 256 aa20.12■□□□□ 0.81
PTPA-208ENST00000411917 SMYD2Q9NRG4 433 aa20.12■□□□□ 0.81
PTPA-208ENST00000411917 EURLQ9NYK6 297 aa20.12■□□□□ 0.81
PTPA-208ENST00000411917 ATG2BQ96BY7 2078 aa20.12■□□□□ 0.81
PTPA-208ENST00000411917 A8MX80 341 aa20.11■□□□□ 0.81
PTPA-208ENST00000411917 AXIN1O15169 862 aa20.11■□□□□ 0.81
PTPA-208ENST00000411917 RNGTTO60942 597 aaKnown RBP20.11■□□□□ 0.81
PTPA-208ENST00000411917 ACSL1P33121 698 aa20.11■□□□□ 0.81
PTPA-208ENST00000411917 GP5P40197 560 aa20.11■□□□□ 0.81
PTPA-208ENST00000411917 PTPRCAPQ14761 206 aa20.11■□□□□ 0.81
PTPA-208ENST00000411917 GRTP1Q5TC63 336 aa20.11■□□□□ 0.81
PTPA-208ENST00000411917 ZNF470Q6ECI4 717 aa20.11■□□□□ 0.81
PTPA-208ENST00000411917 PACS1Q6VY07 963 aa20.11■□□□□ 0.81
PTPA-208ENST00000411917 WDR5BQ86VZ2 330 aa20.11■□□□□ 0.81
PTPA-208ENST00000411917 FAM174AQ8TBP5 190 aa20.11■□□□□ 0.81
PTPA-208ENST00000411917 ZNF398Q8TD17 642 aa20.11■□□□□ 0.81
PTPA-208ENST00000411917 AP2M1Q96CW1 435 aa20.11■□□□□ 0.81
PTPA-208ENST00000411917 SPACA7Q96KW9 195 aa20.11■□□□□ 0.81
PTPA-208ENST00000411917 ZIM3Q96PE6 472 aa20.11■□□□□ 0.81
PTPA-208ENST00000411917 PAFAH2Q99487 392 aa20.11■□□□□ 0.81
PTPA-208ENST00000411917 SLC17A9Q9BYT1 436 aa20.11■□□□□ 0.81
PTPA-208ENST00000411917 PPANQ9NQ55 473 aaKnown RBP20.11■□□□□ 0.81
PTPA-208ENST00000411917 SPATA6Q9NWH7 488 aaPredicted RBP20.11■□□□□ 0.81
PTPA-208ENST00000411917 ZNF446Q9NWS9 450 aa20.11■□□□□ 0.81
PTPA-208ENST00000411917 LGALS13Q9UHV8 139 aa20.11■□□□□ 0.81
PTPA-208ENST00000411917 FBXO5Q9UKT4 447 aa20.11■□□□□ 0.81
PTPA-208ENST00000411917 DMTF1Q9Y222 760 aa20.11■□□□□ 0.81
PTPA-208ENST00000411917 MUC3AQ02505 3323 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 PLXNA2O75051 1894 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 IGLV3-16A0A075B6K0 115 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 TBC1D3DA0A087WVF3 549 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 TBC1D3IA0A087WXS9 549 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 TBC1D3EA0A087X179 549 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 TBC1D3KA0A087X1G2 549 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 A0A0U1RQS6 177 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 A0A1W2PQU0 124 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 TBC1D3FA6NER0 549 aaPredicted RBP20.1■□□□□ 0.81
PTPA-208ENST00000411917 IGLON5A6NGN9 336 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 TBC1D3LB9A6J9 549 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 FAM155BO75949 473 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 SLC4A1P02730 911 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 SHBGP04278 402 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 HOXC4P09017 264 aaPredicted RBP20.1■□□□□ 0.81
PTPA-208ENST00000411917 TBC1D3HP0C7X1 549 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 TMPRSS15P98073 1019 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 IFFO1Q0D2I5 559 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 DNAJC3Q13217 504 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 SGCGQ13326 291 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 USP39Q53GS9 565 aaKnown RBP20.1■□□□□ 0.81
PTPA-208ENST00000411917 TBC1D3GQ6DHY5 549 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 TBC1D3CQ6IPX1 549 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 FAM151BQ6UXP7 276 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 ADAMTSL4Q6UY14 1074 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 CAPN12Q6ZSI9 719 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 TAOK1Q7L7X3 1001 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 C1orf210Q8IVY1 113 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 UNC5BQ8IZJ1 945 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 TBC1D3Q8IZP1 549 aaPredicted RBP20.1■□□□□ 0.81
PTPA-208ENST00000411917 NXPE1Q8N323 547 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 ERLEC1Q96DZ1 483 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 TOE1Q96GM8 510 aaKnown RBP20.1■□□□□ 0.81
PTPA-208ENST00000411917 SUDS3Q9H7L9 328 aaPredicted RBP20.1■□□□□ 0.81
PTPA-208ENST00000411917 IARS2Q9NSE4 1012 aaKnown RBP20.1■□□□□ 0.81
PTPA-208ENST00000411917 PSMC3IPQ9P2W1 217 aaPredicted RBP20.1■□□□□ 0.81
PTPA-208ENST00000411917 COMMD10Q9Y6G5 202 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 PLXND1Q9Y4D7 1925 aa20.1■□□□□ 0.81
PTPA-208ENST00000411917 CCDC78A2IDD5 438 aa20.09■□□□□ 0.81
PTPA-208ENST00000411917 CXorf49A8MYA2 514 aaPredicted RBP20.09■□□□□ 0.81
PTPA-208ENST00000411917 RASGRF2O14827 1237 aa20.09■□□□□ 0.81
PTPA-208ENST00000411917 LAMTOR5O43504 91 aa20.09■□□□□ 0.81
PTPA-208ENST00000411917 INHBAP08476 426 aa20.09■□□□□ 0.81
PTPA-208ENST00000411917 CD9P21926 228 aa20.09■□□□□ 0.81
PTPA-208ENST00000411917 ACRV1P26436 265 aa20.09■□□□□ 0.81
PTPA-208ENST00000411917 GCAP28676 217 aa20.09■□□□□ 0.81
PTPA-208ENST00000411917 TRIM23P36406 574 aa20.09■□□□□ 0.81
PTPA-208ENST00000411917 SLC1A2P43004 574 aa20.09■□□□□ 0.81
PTPA-208ENST00000411917 PTGER3P43115 390 aa20.09■□□□□ 0.81
PTPA-208ENST00000411917 MSH2P43246 934 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms