RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 POLNQ7Z5Q5 900 aa16.61■□□□□ 0.25
MRPL55-220ENST00000411464 TRIM74Q86UV6 250 aa16.61■□□□□ 0.25
MRPL55-220ENST00000411464 NLRP8Q86W28 1048 aa16.61■□□□□ 0.25
MRPL55-220ENST00000411464 SFRP1Q8N474 314 aa16.61■□□□□ 0.25
MRPL55-220ENST00000411464 BMPERQ8N8U9 685 aa16.61■□□□□ 0.25
MRPL55-220ENST00000411464 EXD1Q8NHP7 514 aa16.61■□□□□ 0.25
MRPL55-220ENST00000411464 C9orf43Q8TAL5 461 aaPredicted RBP16.61■□□□□ 0.25
MRPL55-220ENST00000411464 PIH1D2Q8WWB5 315 aa16.61■□□□□ 0.25
MRPL55-220ENST00000411464 SCAMP4Q969E2 229 aa16.61■□□□□ 0.25
MRPL55-220ENST00000411464 RTP4Q96DX8 246 aa16.61■□□□□ 0.25
MRPL55-220ENST00000411464 CTRCQ99895 268 aa16.61■□□□□ 0.25
MRPL55-220ENST00000411464 ZPBPQ9BS86 351 aa16.61■□□□□ 0.25
MRPL55-220ENST00000411464 STN1Q9H668 368 aaKnown RBP16.61■□□□□ 0.25
MRPL55-220ENST00000411464 MRPL47Q9HD33 250 aaKnown RBP16.61■□□□□ 0.25
MRPL55-220ENST00000411464 ETNK2Q9NVF9 386 aa16.61■□□□□ 0.25
MRPL55-220ENST00000411464 ANKMY1Q9P2S6 941 aa16.61■□□□□ 0.25
MRPL55-220ENST00000411464 CNOT8Q9UFF9 292 aaKnown RBP16.61■□□□□ 0.25
MRPL55-220ENST00000411464 ZNHIT2Q9UHR6 403 aa16.61■□□□□ 0.25
MRPL55-220ENST00000411464 MYO6Q9UM54 1294 aa16.61■□□□□ 0.25
MRPL55-220ENST00000411464 SCINQ9Y6U3 715 aa16.61■□□□□ 0.25
MRPL55-220ENST00000411464 A0A0U1RQS6 177 aa16.6■□□□□ 0.25
MRPL55-220ENST00000411464 MAP3K6O95382 1288 aa16.6■□□□□ 0.25
MRPL55-220ENST00000411464 ASMTLO95671 621 aa16.6■□□□□ 0.25
MRPL55-220ENST00000411464 SOD1P00441 154 aa16.6■□□□□ 0.25
MRPL55-220ENST00000411464 PDHA1P08559 390 aa16.6■□□□□ 0.25
MRPL55-220ENST00000411464 PRKAR1AP10644 381 aa16.6■□□□□ 0.25
MRPL55-220ENST00000411464 GZMAP12544 262 aa16.6■□□□□ 0.25
MRPL55-220ENST00000411464 ANP32AP39687 249 aaKnown RBP16.6■□□□□ 0.25
MRPL55-220ENST00000411464 EPHB1P54762 984 aa16.6■□□□□ 0.25
MRPL55-220ENST00000411464 HHEXQ03014 270 aa16.6■□□□□ 0.25
MRPL55-220ENST00000411464 PTSQ03393 145 aa16.6■□□□□ 0.25
MRPL55-220ENST00000411464 ITKQ08881 620 aa16.6■□□□□ 0.25
MRPL55-220ENST00000411464 SMTNL2Q2TAL5 461 aa16.6■□□□□ 0.25
MRPL55-220ENST00000411464 SASS6Q6UVJ0 657 aa16.6■□□□□ 0.25
MRPL55-220ENST00000411464 ZNF765Q7L2R6 523 aa16.6■□□□□ 0.25
MRPL55-220ENST00000411464 NCSTNQ92542 709 aa16.6■□□□□ 0.25
MRPL55-220ENST00000411464 HSPH1Q92598 858 aa16.6■□□□□ 0.25
MRPL55-220ENST00000411464 SH3KBP1Q96B97 665 aa16.6■□□□□ 0.25
MRPL55-220ENST00000411464 CSPG4P5Q96PW8 444 aa16.6■□□□□ 0.25
MRPL55-220ENST00000411464 TRIT1Q9H3H1 467 aaKnown RBP16.6■□□□□ 0.25
MRPL55-220ENST00000411464 NT5MQ9NPB1 228 aa16.6■□□□□ 0.25
MRPL55-220ENST00000411464 ZNF71Q9NQZ8 489 aaPredicted RBP16.6■□□□□ 0.25
MRPL55-220ENST00000411464 FBXO8Q9NRD0 319 aa16.6■□□□□ 0.25
MRPL55-220ENST00000411464 ANO10Q9NW15 660 aa16.6■□□□□ 0.25
MRPL55-220ENST00000411464 INPP4BO15327 924 aa16.59■□□□□ 0.25
MRPL55-220ENST00000411464 ZNF30P17039 623 aa16.59■□□□□ 0.25
MRPL55-220ENST00000411464 IL1R2P27930 398 aa16.59■□□□□ 0.25
MRPL55-220ENST00000411464 SERPINB6P35237 376 aa16.59■□□□□ 0.25
MRPL55-220ENST00000411464 FOXK1P85037 733 aa16.59■□□□□ 0.25
MRPL55-220ENST00000411464 MC1RQ01726 317 aa16.59■□□□□ 0.25
MRPL55-220ENST00000411464 NFATC2Q13469 925 aa16.59■□□□□ 0.25
MRPL55-220ENST00000411464 IGFBP7Q16270 282 aa16.59■□□□□ 0.25
MRPL55-220ENST00000411464 ASIC2Q16515 512 aa16.59■□□□□ 0.25
MRPL55-220ENST00000411464 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.59■□□□□ 0.25
MRPL55-220ENST00000411464 ARHGAP22Q7Z5H3 698 aa16.59■□□□□ 0.25
MRPL55-220ENST00000411464 UNC5BQ8IZJ1 945 aa16.59■□□□□ 0.25
MRPL55-220ENST00000411464 APOBEC4Q8WW27 367 aaKnown RBP16.59■□□□□ 0.25
MRPL55-220ENST00000411464 ZNF653Q96CK0 615 aa16.59■□□□□ 0.25
MRPL55-220ENST00000411464 RIOK2Q9BVS4 552 aaKnown RBP16.59■□□□□ 0.25
MRPL55-220ENST00000411464 SPRY4Q9C004 299 aa16.59■□□□□ 0.25
MRPL55-220ENST00000411464 HAUS4Q9H6D7 363 aa16.59■□□□□ 0.25
MRPL55-220ENST00000411464 SARS2Q9NP81 518 aaKnown RBP16.59■□□□□ 0.25
MRPL55-220ENST00000411464 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.59■□□□□ 0.25
MRPL55-220ENST00000411464 MYO1AQ9UBC5 1043 aa16.59■□□□□ 0.25
MRPL55-220ENST00000411464 ANKRD36A6QL64 1941 aa16.58■□□□□ 0.25
MRPL55-220ENST00000411464 LOC101059948A0A1B0GTJ6 334 aa16.58■□□□□ 0.24
MRPL55-220ENST00000411464 STK17BO94768 372 aa16.58■□□□□ 0.24
MRPL55-220ENST00000411464 MAPK9P45984 424 aa16.58■□□□□ 0.24
MRPL55-220ENST00000411464 ABHD18Q0P651 414 aa16.58■□□□□ 0.24
MRPL55-220ENST00000411464 CDC20Q12834 499 aa16.58■□□□□ 0.24
MRPL55-220ENST00000411464 SEPT6Q14141 434 aa16.58■□□□□ 0.24
MRPL55-220ENST00000411464 NCAPHQ15003 741 aa16.58■□□□□ 0.24
MRPL55-220ENST00000411464 DEFB109BQ30KR1 87 aa16.58■□□□□ 0.24
MRPL55-220ENST00000411464 IYDQ6PHW0 289 aa16.58■□□□□ 0.24
MRPL55-220ENST00000411464 RBM43Q6ZSC3 357 aaKnown RBP16.58■□□□□ 0.24
MRPL55-220ENST00000411464 CHST15Q7LFX5 561 aaPredicted RBP16.58■□□□□ 0.24
MRPL55-220ENST00000411464 APTXQ7Z2E3 356 aaKnown RBP16.58■□□□□ 0.24
MRPL55-220ENST00000411464 SLC9B2Q86UD5 537 aa16.58■□□□□ 0.24
MRPL55-220ENST00000411464 LRRC49Q8IUZ0 686 aa16.58■□□□□ 0.24
MRPL55-220ENST00000411464 TRIM11Q96F44 468 aa16.58■□□□□ 0.24
MRPL55-220ENST00000411464 COX14Q96I36 57 aa16.58■□□□□ 0.24
MRPL55-220ENST00000411464 AGAP2Q99490 1192 aa16.58■□□□□ 0.24
MRPL55-220ENST00000411464 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.58■□□□□ 0.24
MRPL55-220ENST00000411464 DNPEPQ9ULA0 475 aa16.58■□□□□ 0.24
MRPL55-220ENST00000411464 PRKAB1Q9Y478 270 aa16.58■□□□□ 0.24
MRPL55-220ENST00000411464 A0A0J9YYE9 177 aa16.57■□□□□ 0.24
MRPL55-220ENST00000411464 LRRC53A6NM62 1247 aa16.57■□□□□ 0.24
MRPL55-220ENST00000411464 POLR1CO15160 346 aaPredicted RBP16.57■□□□□ 0.24
MRPL55-220ENST00000411464 FZD6O60353 706 aa16.57■□□□□ 0.24
MRPL55-220ENST00000411464 EML2O95834 649 aa16.57■□□□□ 0.24
MRPL55-220ENST00000411464 TRBC1P01850 177 aa16.57■□□□□ 0.24
MRPL55-220ENST00000411464 NTRK1P04629 796 aa16.57■□□□□ 0.24
MRPL55-220ENST00000411464 ATP1A1P05023 1023 aaKnown RBP16.57■□□□□ 0.24
MRPL55-220ENST00000411464 MYBL1P10243 752 aa16.57■□□□□ 0.24
MRPL55-220ENST00000411464 SLC2A4P14672 509 aa16.57■□□□□ 0.24
MRPL55-220ENST00000411464 CES1P23141 567 aa16.57■□□□□ 0.24
MRPL55-220ENST00000411464 TIPARPQ7Z3E1 657 aaKnown RBP16.57■□□□□ 0.24
MRPL55-220ENST00000411464 ZNF571Q7Z3V5 609 aaPredicted RBP16.57■□□□□ 0.24
MRPL55-220ENST00000411464 TEX26Q8N6G2 289 aa16.57■□□□□ 0.24
MRPL55-220ENST00000411464 ABHD17AQ96GS6 310 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms