RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 MC1RQ01726 317 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 NUCB1Q02818 461 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TFF2Q03403 129 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ZBTB16Q05516 673 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ACSM2AQ08AH3 577 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 FAM27E3Q08E93 113 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 LAMB3Q13751 1172 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 RNPS1Q15287 305 aaKnown RBP2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 NAB2Q15742 525 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SMTNL2Q2TAL5 461 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 USP41Q3LFD5 358 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SLC9B1Q4ZJI4 515 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 CEP78Q5JTW2 689 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 C1orf141Q5JVX7 400 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 Q5PR19 223 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ACSM2BQ68CK6 577 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 FAM122CQ6P4D5 195 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 CFAP161Q6P656 301 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SHC4Q6S5L8 630 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ZNF782Q6ZMW2 699 aaPredicted RBP2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 CACNA2D4Q7Z3S7 1137 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 RNF168Q8IYW5 571 aaPredicted RBP2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ADGRF2Q8IZF7 708 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SRBD1Q8N5C6 995 aaKnown RBP2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 HORMAD2Q8N7B1 307 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 EXD3Q8N9H8 876 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ANKRD52Q8NB46 1076 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TMEM116Q8NCL8 245 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 MCPH1Q8NEM0 835 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 CMASQ8NFW8 434 aaPredicted RBP2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 C16orf52Q8NHV5 167 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 MAGEC3Q8TD91 643 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 NSMCE1Q8WV22 266 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 USP6NLQ92738 828 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 NSUN4Q96CB9 384 aaKnown RBP2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 FAM120BQ96EK7 910 aaKnown RBP2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 CAPNS2Q96L46 248 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 NEUROD6Q96NK8 337 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 PIP5K1AQ99755 562 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SF3B5Q9BWJ5 86 aaKnown RBP2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 IL21RQ9HBE5 538 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ZNF304Q9HCX3 659 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SLC35C2Q9NQQ7 365 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 POT1Q9NUX5 634 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TRNAU1APQ9NX07 287 aaKnown RBP2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 PSD3Q9NYI0 1048 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 CWC15Q9P013 229 aaKnown RBP2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 MDFICQ9P1T7 246 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 HDAC6Q9UBN7 1215 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 NDRG3Q9UGV2 375 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 NARFQ9UHQ1 456 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 GPR34Q9UPC5 381 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 FNDC1Q4ZHG4 1894 aaPredicted RBP2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 A0A1W2PP64 1363 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 CARMIL3Q8ND23 1372 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 A0A1W2PPC1 479 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 KANSL1LA0AUZ9 987 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 LIPT2A6NK58 231 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 PTGES3LE9PB15 166 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 STMND1H3BQB6 276 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 CHL1O00533 1208 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SOCS2O14508 198 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 VILLO15195 856 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SEC14L5O43304 696 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SLC25A17O43808 307 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 HS6ST1O60243 411 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 MOSPD3O75425 235 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 HIST1H2ABP04908 130 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 CYP1A2P05177 515 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SRPRAP08240 638 aaKnown RBP2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 MMP2P08253 660 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 HIST1H2ADP20671 130 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 MPGP29372 298 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TNFSF8P32971 234 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 PRCPP42785 496 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 MRPL12P52815 198 aaKnown RBP2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ZP1P60852 638 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TMEM115Q12893 351 aaPredicted RBP2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 PRPF4BQ13523 1007 aaKnown RBP2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ACVR2BQ13705 512 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 FRG1Q14331 258 aaKnown RBP2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 KCTD2Q14681 263 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 DAZAP2Q15038 168 aaPredicted RBP2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 MEA1Q16626 185 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 PCGF3Q3KNV8 242 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ZNF260Q3ZCT1 412 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SYTL3Q4VX76 610 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 PPP6R3Q5H9R7 873 aaPredicted RBP2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ZNF667Q5HYK9 610 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 DNTTIP2Q5QJE6 756 aaKnown RBP2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 PIK3CD-AS1Q5SR53 167 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 C10orf25Q5T742 122 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SNX30Q5VWJ9 437 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 GPR139Q6DWJ6 353 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 NAPEPLDQ6IQ20 393 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 METTL2BQ6P1Q9 378 aaKnown RBP2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 KLHL35Q6PF15 583 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TRILQ7L0X0 811 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 MON1BQ7L1V2 547 aa2.67□□□□□ -1.98
RNU6-1140P-201ENST00000410517 HIST3H2AQ7L7L0 130 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms