RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 TREX1Q9NSU2 369 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 CHMP2BQ9UQN3 213 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 PCDHGA5Q9Y5G8 931 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 SLC30A1Q9Y6M5 507 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 RPS6KL1Q9Y6S9 549 aa20.52■□□□□ 0.88
C4orf48-202ENST00000409860 CCL22O00626 93 aa20.51■□□□□ 0.87
C4orf48-202ENST00000409860 USP1O94782 785 aa20.51■□□□□ 0.87
C4orf48-202ENST00000409860 TTC4O95801 387 aa20.51■□□□□ 0.87
C4orf48-202ENST00000409860 POLBP06746 335 aa20.51■□□□□ 0.87
C4orf48-202ENST00000409860 ITGALP20701 1170 aa20.51■□□□□ 0.87
C4orf48-202ENST00000409860 CD38P28907 300 aa20.51■□□□□ 0.87
C4orf48-202ENST00000409860 MC4RP32245 332 aa20.51■□□□□ 0.87
C4orf48-202ENST00000409860 RABIFP47224 123 aa20.51■□□□□ 0.87
C4orf48-202ENST00000409860 ARSDP51689 593 aa20.51■□□□□ 0.87
C4orf48-202ENST00000409860 AFF3P51826 1226 aaKnown RBP20.51■□□□□ 0.87
C4orf48-202ENST00000409860 OVGP1Q12889 678 aa20.51■□□□□ 0.87
C4orf48-202ENST00000409860 CHRNA6Q15825 494 aa20.51■□□□□ 0.87
C4orf48-202ENST00000409860 ANKRD20A4Q4UJ75 823 aa20.51■□□□□ 0.87
C4orf48-202ENST00000409860 PEAR1Q5VY43 1037 aaPredicted RBP20.51■□□□□ 0.87
C4orf48-202ENST00000409860 AFTPHQ6ULP2 937 aa20.51■□□□□ 0.87
C4orf48-202ENST00000409860 CES3Q6UWW8 571 aa20.51■□□□□ 0.87
C4orf48-202ENST00000409860 ADAMTSL4Q6UY14 1074 aa20.51■□□□□ 0.87
C4orf48-202ENST00000409860 ZBED8Q8IZ13 594 aa20.51■□□□□ 0.87
C4orf48-202ENST00000409860 GPR161Q8N6U8 529 aaKnown RBP20.51■□□□□ 0.87
C4orf48-202ENST00000409860 MFSD2AQ8NA29 543 aa20.51■□□□□ 0.87
C4orf48-202ENST00000409860 MFSD3Q96ES6 412 aa20.51■□□□□ 0.87
C4orf48-202ENST00000409860 BMFQ96LC9 184 aa20.51■□□□□ 0.87
C4orf48-202ENST00000409860 TBATAQ96M53 351 aa20.51■□□□□ 0.87
C4orf48-202ENST00000409860 AGAP2Q99490 1192 aa20.51■□□□□ 0.87
C4orf48-202ENST00000409860 ZC3H7BQ9UGR2 993 aaKnown RBP20.51■□□□□ 0.87
C4orf48-202ENST00000409860 GMEB2Q9UKD1 530 aa20.51■□□□□ 0.87
C4orf48-202ENST00000409860 TEX264Q9Y6I9 313 aa20.51■□□□□ 0.87
C4orf48-202ENST00000409860 SLCO1B1Q9Y6L6 691 aa20.51■□□□□ 0.87
C4orf48-202ENST00000409860 THADAQ6YHU6 1953 aa20.5■□□□□ 0.87
C4orf48-202ENST00000409860 POM121BA6NF01 834 aa20.5■□□□□ 0.87
C4orf48-202ENST00000409860 H0Y8X5 98 aa20.5■□□□□ 0.87
C4orf48-202ENST00000409860 K7ESM1 405 aa20.5■□□□□ 0.87
C4orf48-202ENST00000409860 MAGEC1O60732 1142 aa20.5■□□□□ 0.87
C4orf48-202ENST00000409860 SRP72O76094 671 aaKnown RBP20.5■□□□□ 0.87
C4orf48-202ENST00000409860 SOD1P00441 154 aa20.5■□□□□ 0.87
C4orf48-202ENST00000409860 ECHS1P30084 290 aa20.5■□□□□ 0.87
C4orf48-202ENST00000409860 PFN3P60673 137 aa20.5■□□□□ 0.87
C4orf48-202ENST00000409860 YPEL5P62699 121 aa20.5■□□□□ 0.87
C4orf48-202ENST00000409860 XIAPP98170 497 aa20.5■□□□□ 0.87
C4orf48-202ENST00000409860 HP1BP3Q5SSJ5 553 aaPredicted RBP20.5■□□□□ 0.87
C4orf48-202ENST00000409860 KIAA0930Q6ICG6 404 aaPredicted RBP20.5■□□□□ 0.87
C4orf48-202ENST00000409860 TMEM135Q86UB9 458 aa20.5■□□□□ 0.87
C4orf48-202ENST00000409860 IQCHQ86VS3 1027 aa20.5■□□□□ 0.87
C4orf48-202ENST00000409860 HEATR4Q86WZ0 1026 aa20.5■□□□□ 0.87
C4orf48-202ENST00000409860 ANKMY2Q8IV38 441 aa20.5■□□□□ 0.87
C4orf48-202ENST00000409860 PELI3Q8N2H9 469 aa20.5■□□□□ 0.87
C4orf48-202ENST00000409860 EIF1ADQ8N9N8 165 aaKnown RBP20.5■□□□□ 0.87
C4orf48-202ENST00000409860 FBXO36Q8NEA4 188 aa20.5■□□□□ 0.87
C4orf48-202ENST00000409860 OR6P1Q8NGX9 317 aa20.5■□□□□ 0.87
C4orf48-202ENST00000409860 CEP76Q8TAP6 659 aa20.5■□□□□ 0.87
C4orf48-202ENST00000409860 HDAC10Q969S8 669 aa20.5■□□□□ 0.87
C4orf48-202ENST00000409860 CFAP36Q96G28 342 aa20.5■□□□□ 0.87
C4orf48-202ENST00000409860 KLHDC7BQ96G42 594 aa20.5■□□□□ 0.87
C4orf48-202ENST00000409860 ANKZF1Q9H8Y5 726 aa20.5■□□□□ 0.87
C4orf48-202ENST00000409860 PHPT1Q9NRX4 125 aaPredicted RBP20.5■□□□□ 0.87
C4orf48-202ENST00000409860 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.5■□□□□ 0.87
C4orf48-202ENST00000409860 NFU1Q9UMS0 254 aa20.5■□□□□ 0.87
C4orf48-202ENST00000409860 V9GYY5 206 aaPredicted RBP20.5■□□□□ 0.87
C4orf48-202ENST00000409860 FANCMQ8IYD8 2048 aa20.49■□□□□ 0.87
C4orf48-202ENST00000409860 A0A1W2PR77 199 aa20.49■□□□□ 0.87
C4orf48-202ENST00000409860 CCDC162PA2VCL2 907 aa20.49■□□□□ 0.87
C4orf48-202ENST00000409860 FADS2P1A8MWK0 482 aa20.49■□□□□ 0.87
C4orf48-202ENST00000409860 CACNB4O00305 520 aaPredicted RBP20.49■□□□□ 0.87
C4orf48-202ENST00000409860 GAPDHSO14556 408 aaPredicted RBP20.49■□□□□ 0.87
C4orf48-202ENST00000409860 THEGLP0DJG4 465 aa20.49■□□□□ 0.87
C4orf48-202ENST00000409860 TNFRSF8P28908 595 aa20.49■□□□□ 0.87
C4orf48-202ENST00000409860 TRIM23P36406 574 aa20.49■□□□□ 0.87
C4orf48-202ENST00000409860 C21orf59P57076 290 aa20.49■□□□□ 0.87
C4orf48-202ENST00000409860 CDK3Q00526 305 aa20.49■□□□□ 0.87
C4orf48-202ENST00000409860 PEX6Q13608 980 aa20.49■□□□□ 0.87
C4orf48-202ENST00000409860 DUOXA1Q1HG43 343 aa20.49■□□□□ 0.87
C4orf48-202ENST00000409860 SPANXN3Q5MJ09 141 aa20.49■□□□□ 0.87
C4orf48-202ENST00000409860 Q6ZSR6 202 aa20.49■□□□□ 0.87
C4orf48-202ENST00000409860 SNX20Q7Z614 316 aa20.49■□□□□ 0.87
C4orf48-202ENST00000409860 IGDCC3Q8IVU1 814 aa20.49■□□□□ 0.87
C4orf48-202ENST00000409860 SUMF1Q8NBK3 374 aa20.49■□□□□ 0.87
C4orf48-202ENST00000409860 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.49■□□□□ 0.87
C4orf48-202ENST00000409860 ZNF398Q8TD17 642 aa20.49■□□□□ 0.87
C4orf48-202ENST00000409860 PYROXD1Q8WU10 500 aa20.49■□□□□ 0.87
C4orf48-202ENST00000409860 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.49■□□□□ 0.87
C4orf48-202ENST00000409860 ULK4Q96C45 1275 aa20.49■□□□□ 0.87
C4orf48-202ENST00000409860 WDR83Q9BRX9 315 aaKnown RBP20.49■□□□□ 0.87
C4orf48-202ENST00000409860 TRIM56Q9BRZ2 755 aaKnown RBP20.49■□□□□ 0.87
C4orf48-202ENST00000409860 APOOQ9BUR5 198 aa20.49■□□□□ 0.87
C4orf48-202ENST00000409860 ASB8Q9H765 288 aa20.49■□□□□ 0.87
C4orf48-202ENST00000409860 SUDS3Q9H7L9 328 aaPredicted RBP20.49■□□□□ 0.87
C4orf48-202ENST00000409860 TMEM74BQ9NUR3 256 aa20.49■□□□□ 0.87
C4orf48-202ENST00000409860 CRLS1Q9UJA2 301 aa20.49■□□□□ 0.87
C4orf48-202ENST00000409860 OR1A2Q9Y585 309 aa20.49■□□□□ 0.87
C4orf48-202ENST00000409860 MUC6Q6W4X9 2439 aa20.48■□□□□ 0.87
C4orf48-202ENST00000409860 SPAG17Q6Q759 2223 aa20.48■□□□□ 0.87
C4orf48-202ENST00000409860 VILLO15195 856 aa20.48■□□□□ 0.87
C4orf48-202ENST00000409860 GOT2P00505 430 aaKnown RBP20.48■□□□□ 0.87
C4orf48-202ENST00000409860 RETP07949 1114 aa20.48■□□□□ 0.87
C4orf48-202ENST00000409860 HOXC4P09017 264 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms