RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 PCID2Q5JVF3 399 aa18.05■□□□□ 0.48
PAX3-208ENST00000409828 RAET1GQ6H3X3 334 aa18.05■□□□□ 0.48
PAX3-208ENST00000409828 CTAGE6Q86UF2 777 aa18.05■□□□□ 0.48
PAX3-208ENST00000409828 PARGQ86W56 976 aa18.05■□□□□ 0.48
PAX3-208ENST00000409828 SPATS2Q86XZ4 545 aaKnown RBP18.05■□□□□ 0.48
PAX3-208ENST00000409828 CTAGE4Q8IX94 777 aa18.05■□□□□ 0.48
PAX3-208ENST00000409828 MMGT1Q8N4V1 131 aa18.05■□□□□ 0.48
PAX3-208ENST00000409828 FUBP1Q96AE4 644 aaKnown RBP18.05■□□□□ 0.48
PAX3-208ENST00000409828 SNF8Q96H20 258 aa18.05■□□□□ 0.48
PAX3-208ENST00000409828 COX14Q96I36 57 aa18.05■□□□□ 0.48
PAX3-208ENST00000409828 VPS35Q96QK1 796 aa18.05■□□□□ 0.48
PAX3-208ENST00000409828 ELF4Q99607 663 aaPredicted RBP18.05■□□□□ 0.48
PAX3-208ENST00000409828 SMOC1Q9H4F8 434 aa18.05■□□□□ 0.48
PAX3-208ENST00000409828 MRM3Q9HC36 420 aaKnown RBP18.05■□□□□ 0.48
PAX3-208ENST00000409828 IL26Q9NPH9 171 aa18.05■□□□□ 0.48
PAX3-208ENST00000409828 DNAAF2Q9NVR5 837 aaKnown RBP18.05■□□□□ 0.48
PAX3-208ENST00000409828 NLE1Q9NVX2 485 aaPredicted RBP18.05■□□□□ 0.48
PAX3-208ENST00000409828 CD84Q9UIB8 345 aa18.05■□□□□ 0.48
PAX3-208ENST00000409828 SNX11Q9Y5W9 270 aa18.05■□□□□ 0.48
PAX3-208ENST00000409828 LRP4O75096 1905 aa18.05■□□□□ 0.48
PAX3-208ENST00000409828 TDRD6O60522 2096 aaKnown RBP18.04■□□□□ 0.48
PAX3-208ENST00000409828 MAGEB16A2A368 324 aa18.04■□□□□ 0.48
PAX3-208ENST00000409828 EFCAB8A8MWE9 144 aa18.04■□□□□ 0.48
PAX3-208ENST00000409828 RAD51CO43502 376 aa18.04■□□□□ 0.48
PAX3-208ENST00000409828 SEC31AO94979 1220 aaKnown RBP18.04■□□□□ 0.48
PAX3-208ENST00000409828 ARRB1P49407 418 aaPredicted RBP18.04■□□□□ 0.48
PAX3-208ENST00000409828 ATXN3P54252 364 aaPredicted RBP18.04■□□□□ 0.48
PAX3-208ENST00000409828 DRG2P55039 364 aaKnown RBP18.04■□□□□ 0.48
PAX3-208ENST00000409828 CDK3Q00526 305 aa18.04■□□□□ 0.48
PAX3-208ENST00000409828 ACVR1Q04771 509 aa18.04■□□□□ 0.48
PAX3-208ENST00000409828 ITGA9Q13797 1035 aa18.04■□□□□ 0.48
PAX3-208ENST00000409828 FZD2Q14332 565 aa18.04■□□□□ 0.48
PAX3-208ENST00000409828 HLA-BQ31612 363 aa18.04■□□□□ 0.48
PAX3-208ENST00000409828 CERCAMQ5T4B2 595 aa18.04■□□□□ 0.48
PAX3-208ENST00000409828 ANKRD22Q5VYY1 191 aa18.04■□□□□ 0.48
PAX3-208ENST00000409828 TCEAL6Q6IPX3 200 aa18.04■□□□□ 0.48
PAX3-208ENST00000409828 CAND1Q86VP6 1230 aaKnown RBP18.04■□□□□ 0.48
PAX3-208ENST00000409828 HEATR4Q86WZ0 1026 aa18.04■□□□□ 0.48
PAX3-208ENST00000409828 PELI3Q8N2H9 469 aa18.04■□□□□ 0.48
PAX3-208ENST00000409828 OR4K2Q8NGD2 314 aa18.04■□□□□ 0.48
PAX3-208ENST00000409828 TCEAL3Q969E4 200 aa18.04■□□□□ 0.48
PAX3-208ENST00000409828 HIC2Q96JB3 615 aa18.04■□□□□ 0.48
PAX3-208ENST00000409828 TBATAQ96M53 351 aa18.04■□□□□ 0.48
PAX3-208ENST00000409828 WDR92Q96MX6 357 aa18.04■□□□□ 0.48
PAX3-208ENST00000409828 SERPINB12Q96P63 405 aa18.04■□□□□ 0.48
PAX3-208ENST00000409828 RAB17Q9H0T7 212 aa18.04■□□□□ 0.48
PAX3-208ENST00000409828 SMOXQ9NWM0 555 aa18.04■□□□□ 0.48
PAX3-208ENST00000409828 TCAF1Q9Y4C2 921 aa18.04■□□□□ 0.48
PAX3-208ENST00000409828 GLYATL1P3A0A0U1RQE8 302 aa18.03■□□□□ 0.48
PAX3-208ENST00000409828 AGAP14A8MT82 685 aa18.03■□□□□ 0.48
PAX3-208ENST00000409828 BLKP51451 505 aa18.03■□□□□ 0.48
PAX3-208ENST00000409828 ARHGAP8P85298 464 aa18.03■□□□□ 0.48
PAX3-208ENST00000409828 SLC14A1Q13336 389 aa18.03■□□□□ 0.48
PAX3-208ENST00000409828 GLE1Q53GS7 698 aaKnown RBP18.03■□□□□ 0.48
PAX3-208ENST00000409828 IZUMO3Q5VZ72 239 aa18.03■□□□□ 0.48
PAX3-208ENST00000409828 LAYNQ6UX15 382 aa18.03■□□□□ 0.48
PAX3-208ENST00000409828 PPHLN1Q8NEY8 458 aaKnown RBP18.03■□□□□ 0.48
PAX3-208ENST00000409828 SGSM3Q96HU1 749 aa18.03■□□□□ 0.48
PAX3-208ENST00000409828 TRIM51Q9BSJ1 452 aa18.03■□□□□ 0.48
PAX3-208ENST00000409828 KIFC1Q9BW19 673 aa18.03■□□□□ 0.48
PAX3-208ENST00000409828 SPATA16Q9BXB7 569 aa18.03■□□□□ 0.48
PAX3-208ENST00000409828 L2HGDHQ9H9P8 463 aa18.03■□□□□ 0.48
PAX3-208ENST00000409828 BPIFA1Q9NP55 256 aa18.03■□□□□ 0.48
PAX3-208ENST00000409828 TMEM9BQ9NQ34 198 aa18.03■□□□□ 0.48
PAX3-208ENST00000409828 WHRNQ9P202 907 aa18.03■□□□□ 0.48
PAX3-208ENST00000409828 CNOT6Q9ULM6 557 aaKnown RBP18.03■□□□□ 0.48
PAX3-208ENST00000409828 UTP11Q9Y3A2 253 aaKnown RBP18.03■□□□□ 0.48
PAX3-208ENST00000409828 OR1A2Q9Y585 309 aa18.03■□□□□ 0.48
PAX3-208ENST00000409828 PCDHGB2Q9Y5G2 931 aa18.03■□□□□ 0.48
PAX3-208ENST00000409828 DGKBQ9Y6T7 804 aa18.03■□□□□ 0.48
PAX3-208ENST00000409828 ARID1BQ8NFD5 2236 aaPredicted RBP18.03■□□□□ 0.48
PAX3-208ENST00000409828 PLXNB3Q9ULL4 1909 aa18.02■□□□□ 0.48
PAX3-208ENST00000409828 A0A1B0GTQ1 180 aa18.02■□□□□ 0.48
PAX3-208ENST00000409828 SDR42E2A6NKP2 422 aa18.02■□□□□ 0.48
PAX3-208ENST00000409828 FADS2P1A8MWK0 482 aa18.02■□□□□ 0.48
PAX3-208ENST00000409828 GPR89AB7ZAQ6 455 aa18.02■□□□□ 0.48
PAX3-208ENST00000409828 CDX4O14627 284 aaPredicted RBP18.02■□□□□ 0.48
PAX3-208ENST00000409828 PCDHGA12O60330 932 aa18.02■□□□□ 0.48
PAX3-208ENST00000409828 SLC4A1P02730 911 aa18.02■□□□□ 0.48
PAX3-208ENST00000409828 CSF2P04141 144 aa18.02■□□□□ 0.48
PAX3-208ENST00000409828 GPR89BP0CG08 455 aa18.02■□□□□ 0.48
PAX3-208ENST00000409828 NME1P15531 152 aaKnown RBP18.02■□□□□ 0.48
PAX3-208ENST00000409828 DEKP35659 375 aaKnown RBP18.02■□□□□ 0.48
PAX3-208ENST00000409828 SESN2P58004 480 aaPredicted RBP18.02■□□□□ 0.48
PAX3-208ENST00000409828 XIAPP98170 497 aa18.02■□□□□ 0.48
PAX3-208ENST00000409828 AASDHQ4L235 1098 aaPredicted RBP18.02■□□□□ 0.48
PAX3-208ENST00000409828 TSTD2Q5T7W7 516 aa18.02■□□□□ 0.48
PAX3-208ENST00000409828 DUPD1Q68J44 220 aa18.02■□□□□ 0.48
PAX3-208ENST00000409828 HIBCHQ6NVY1 386 aaPredicted RBP18.02■□□□□ 0.48
PAX3-208ENST00000409828 MINDY1Q8N5J2 469 aa18.02■□□□□ 0.48
PAX3-208ENST00000409828 BTN2A2Q8WVV5 523 aa18.02■□□□□ 0.48
PAX3-208ENST00000409828 GLYATL1Q969I3 302 aa18.02■□□□□ 0.48
PAX3-208ENST00000409828 SCARF2Q96GP6 870 aaPredicted RBP18.02■□□□□ 0.48
PAX3-208ENST00000409828 CDKN2AIPNLQ96HQ2 116 aa18.02■□□□□ 0.48
PAX3-208ENST00000409828 AGAP2Q99490 1192 aa18.02■□□□□ 0.48
PAX3-208ENST00000409828 EDEM2Q9BV94 578 aa18.02■□□□□ 0.48
PAX3-208ENST00000409828 GAREM1Q9H706 876 aa18.02■□□□□ 0.48
PAX3-208ENST00000409828 PIH1D1Q9NWS0 290 aaKnown RBP18.02■□□□□ 0.48
PAX3-208ENST00000409828 VPS18Q9P253 973 aa18.02■□□□□ 0.48
PAX3-208ENST00000409828 SLC17A4Q9Y2C5 497 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms