RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 ACO2Q99798 780 aaKnown RBP8.39□□□□□ -1.07
SCN9A-203ENST00000409672 FRMD8P1Q9BZ68 369 aaPredicted RBP8.39□□□□□ -1.07
SCN9A-203ENST00000409672 PRDM16Q9HAZ2 1276 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 OAS3Q9Y6K5 1087 aaKnown RBP8.39□□□□□ -1.07
SCN9A-203ENST00000409672 CD163L1Q9NR16 1453 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 DISP2A7MBM2 1401 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 SLC15A5A6NIM6 579 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 LAG3P18627 525 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 MYL9P24844 172 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 AVPR1BP47901 424 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 CCT3P49368 545 aaKnown RBP8.39□□□□□ -1.07
SCN9A-203ENST00000409672 TMEM151BQ8IW70 566 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 FCRL2Q96LA5 508 aaPredicted RBP8.39□□□□□ -1.07
SCN9A-203ENST00000409672 TAGLN3Q9UI15 199 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 TULP3O75386 442 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 PROCP04070 461 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 GRIA4P48058 902 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 LGALS3BPQ08380 585 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 NAE1Q13564 534 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 MYBPC3Q14896 1274 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 APOBEC3HQ6NTF7 200 aaKnown RBP8.39□□□□□ -1.07
SCN9A-203ENST00000409672 GRHL3Q8TE85 626 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 FER1L4A9Z1Z3 1794 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 MAGI3Q5TCQ9 1506 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 GPR89AB7ZAQ6 455 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 C9J4A7 227 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 PEX12O00623 359 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 BCL10O95999 233 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 ITGAVP06756 1048 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 GPR89BP0CG08 455 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 PTPN2P17706 415 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 CDH13P55290 713 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 PUDPQ08623 228 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 PUM1Q14671 1186 aaKnown RBP eCLIP8.39□□□□□ -1.07
SCN9A-203ENST00000409672 ODF4Q2M2E3 257 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 INTS6LQ5JSJ4 861 aaKnown RBP8.39□□□□□ -1.07
SCN9A-203ENST00000409672 TMEM63BQ5T3F8 832 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 PTF1AQ7RTS3 328 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 STAG3L4Q8TBR4 150 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 NUAK2Q9H093 628 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 ARHGEF4Q9NR80 690 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 ASTN2O75129 1339 aaPredicted RBP8.39□□□□□ -1.07
SCN9A-203ENST00000409672 DIP2AQ14689 1571 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 ZSCAN5CA6NGD5 496 aaPredicted RBP8.39□□□□□ -1.07
SCN9A-203ENST00000409672 TMEM220Q6QAJ8 160 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 GLIS3Q8NEA6 775 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 DDX20Q9UHI6 824 aaKnown RBP8.39□□□□□ -1.07
SCN9A-203ENST00000409672 CPS1P31327 1500 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 ZBTB22O15209 634 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 CFHP08603 1231 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 CHRM5P08912 532 aaPredicted RBP8.39□□□□□ -1.07
SCN9A-203ENST00000409672 DBTP11182 482 aaKnown RBP8.39□□□□□ -1.07
SCN9A-203ENST00000409672 TERF2Q15554 542 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 MAPK14Q16539 360 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 ZDHHC17Q8IUH5 632 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 C12orf56Q8IXR9 622 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 FBXO25Q8TCJ0 367 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 PRR11Q96HE9 360 aaPredicted RBP8.39□□□□□ -1.07
SCN9A-203ENST00000409672 SNRNP25Q9BV90 132 aaKnown RBP8.39□□□□□ -1.07
SCN9A-203ENST00000409672 PORCNQ9H237 461 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 TAS2R14Q9NYV8 317 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 CLCA3PQ9Y6N3 262 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 ARL5CA6NH57 179 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 NRP2O60462 931 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 ULK1O75385 1050 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 TM7SF2O76062 418 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 CCNDBP1O95273 360 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 AGXTP21549 392 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 CLCN7P51798 805 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 SMCO1Q147U7 214 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 EARS2Q5JPH6 523 aaKnown RBP8.38□□□□□ -1.07
SCN9A-203ENST00000409672 ZNF549Q6P9A3 640 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 WDR59Q6PJI9 974 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 GRASPQ7Z6J2 395 aaPredicted RBP8.38□□□□□ -1.07
SCN9A-203ENST00000409672 TMEM156Q8N614 296 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 UBE2E3Q969T4 207 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 PLGRKTQ9HBL7 147 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 C9P02748 559 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 CNTFP26441 200 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 CAP1Q01518 475 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 DPYSL3Q14195 570 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 C9orf57Q5W0N0 161 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 FUT10Q6P4F1 479 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 LRIG3Q6UXM1 1119 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 FAM35AQ86V20 835 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 ARMC10Q8N2F6 343 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 MECRQ9BV79 373 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 TAPBPLQ9BX59 468 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 ABCB9Q9NP78 766 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 RRN3Q9NYV6 651 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 HBS1LQ9Y450 684 aaKnown RBP8.38□□□□□ -1.07
SCN9A-203ENST00000409672 CYB5AP00167 134 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 CST1P01037 141 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 MYH3P11055 1940 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 IDSP22304 550 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 CDKN1CP49918 316 aaPredicted RBP8.38□□□□□ -1.07
SCN9A-203ENST00000409672 UBAP2LQ14157 1087 aaKnown RBP8.38□□□□□ -1.07
SCN9A-203ENST00000409672 UGCGQ16739 394 aa8.38□□□□□ -1.07
SCN9A-203ENST00000409672 UBAP2Q5T6F2 1119 aaKnown RBP8.38□□□□□ -1.07
SCN9A-203ENST00000409672 BHLHB9Q6PI77 547 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms