RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 TMEM120AQ9BXJ8 343 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 ZBP1Q9H171 429 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 ZDHHC18Q9NUE0 388 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 KCNK6Q9Y257 313 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 CACNB4O00305 520 aaPredicted RBP11.37□□□□□ -0.59
SNX13-202ENST00000409604 RPSAP08865 295 aaKnown RBP11.37□□□□□ -0.59
SNX13-202ENST00000409604 LTA4HP09960 611 aaKnown RBP11.37□□□□□ -0.59
SNX13-202ENST00000409604 SLC35G4P0C7Q5 338 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 SCNN1AP37088 669 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 SPAM1P38567 509 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 RGRP47804 291 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 AP1S1P61966 158 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 PAFAH1B3Q15102 231 aaKnown RBP11.37□□□□□ -0.59
SNX13-202ENST00000409604 TSNQ15631 228 aaKnown RBP11.37□□□□□ -0.59
SNX13-202ENST00000409604 XKR4Q5GH76 650 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 KDM7AQ6ZMT4 941 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 TAF8Q7Z7C8 310 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 BRSK1Q8TDC3 778 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 COL26A1Q96A83 441 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 TMEM248Q9NWD8 314 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 MTMR10Q9NXD2 777 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 TMEM216Q9P0N5 145 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 OPTCQ9UBM4 332 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 ZNF711Q9Y462 761 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 DNAH12Q6ZR08 3092 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 ARID1BQ8NFD5 2236 aaPredicted RBP11.36□□□□□ -0.59
SNX13-202ENST00000409604 LDB2O43679 373 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 CATP04040 527 aaKnown RBP11.36□□□□□ -0.59
SNX13-202ENST00000409604 GRAMD1BQ3KR37 738 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 VWA5B1Q5TIE3 1220 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 FNDC5Q8NAU1 212 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 CLHC1Q8NHS4 586 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 FAM126AQ9BYI3 521 aaPredicted RBP11.36□□□□□ -0.59
SNX13-202ENST00000409604 WDR55Q9H6Y2 383 aaPredicted RBP11.36□□□□□ -0.59
SNX13-202ENST00000409604 TXLNGQ9NUQ3 528 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 IL36AQ9UHA7 158 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 RABGEF1Q9UJ41 708 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 YBX2Q9Y2T7 364 aaKnown RBP11.36□□□□□ -0.59
SNX13-202ENST00000409604 DYRK1BQ9Y463 629 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 CACNA1HO95180 2353 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 ZNFX1Q9P2E3 1918 aaKnown RBP11.36□□□□□ -0.59
SNX13-202ENST00000409604 A0A0G2JN53 185 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 TMEM189-UBE2V1I3L0A0 370 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 NR5A2O00482 541 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 LRATO95237 230 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 TPSB2P20231 275 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 HSPA7P48741 367 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 NAA25Q14CX7 972 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 TPSAB1Q15661 275 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 SLC5A9Q2M3M2 681 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 AGKQ53H12 422 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 TRABD2AQ86V40 505 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 RBFAQ8N0V3 343 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 AHI1Q8N157 1196 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 JPH3Q8WXH2 748 aaPredicted RBP11.36□□□□□ -0.59
SNX13-202ENST00000409604 C1QTNF7Q9BXJ2 289 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 RC3H2Q9HBD1 1191 aaKnown RBP11.36□□□□□ -0.59
SNX13-202ENST00000409604 USH1CQ9Y6N9 552 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 H3BM21 787 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 MAP2K7O14733 419 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 SEC22BO75396 215 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 SIX3O95343 332 aaPredicted RBP11.36□□□□□ -0.59
SNX13-202ENST00000409604 CYP2A7P20853 494 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 CRABP2P29373 138 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 NUDT2P50583 147 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 PAQR3Q6TCH7 311 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 PIWIL4Q7Z3Z4 852 aaKnown RBP11.36□□□□□ -0.59
SNX13-202ENST00000409604 WFDC5Q8TCV5 224 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 SPDL1Q96EA4 605 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 SPACA7Q96KW9 195 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 THUMPD3Q9BV44 507 aaKnown RBP11.36□□□□□ -0.59
SNX13-202ENST00000409604 CSNK1G1Q9HCP0 422 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 PNPOQ9NVS9 261 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 SOHLH2Q9NX45 425 aa11.36□□□□□ -0.59
SNX13-202ENST00000409604 AURKAO14965 403 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 ALDH1A2O94788 518 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 EFNA1P20827 205 aaPredicted RBP11.35□□□□□ -0.59
SNX13-202ENST00000409604 DGKAP23743 735 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 HLA-FP30511 346 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 CCR2P41597 374 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 GPX6P59796 221 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 AMZ1Q400G9 498 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 TMEM259Q4ZIN3 620 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 NADSYN1Q6IA69 706 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 UBE2R2Q712K3 238 aaPredicted RBP11.35□□□□□ -0.59
SNX13-202ENST00000409604 PRSS58Q8IYP2 241 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 DCAF4L2Q8NA75 395 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 STAG3L4Q8TBR4 150 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 RELTQ969Z4 430 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 TMEM237Q96Q45 408 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 UHRF1Q96T88 793 aaPredicted RBP11.35□□□□□ -0.59
SNX13-202ENST00000409604 GTPBP2Q9BX10 602 aaKnown RBP11.35□□□□□ -0.59
SNX13-202ENST00000409604 SLC6A17Q9H1V8 727 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 RASSF4Q9H2L5 321 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 RHOJQ9H4E5 214 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 CARS2Q9HA77 564 aaKnown RBP11.35□□□□□ -0.59
SNX13-202ENST00000409604 IGSF9Q9P2J2 1179 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 SYCE1LA8MT33 242 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 UBXN8O00124 270 aa11.35□□□□□ -0.59
SNX13-202ENST00000409604 KDELR3O43731 214 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms