RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 OLIG2Q13516 323 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 RBBP5Q15291 538 aaKnown RBP4.03□□□□□ -1.76
PMS1-203ENST00000409593 HSP90AB4PQ58FF6 505 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 FRG2Q64ET8 278 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 DSG4Q86SJ6 1040 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.03□□□□□ -1.76
PMS1-203ENST00000409593 NAXEQ8NCW5 288 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 OR14L1PQ8NHC6 308 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 MMABQ96EY8 250 aaPredicted RBP4.03□□□□□ -1.76
PMS1-203ENST00000409593 RRNAD1Q96FB5 475 aaKnown RBP4.03□□□□□ -1.76
PMS1-203ENST00000409593 SLC26A6Q9BXS9 759 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 DLGAP2Q9P1A6 1054 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 OR2W1Q9Y3N9 320 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 ASPDHA6ND91 283 aa4.02□□□□□ -1.77
PMS1-203ENST00000409593 SPINT2O43291 252 aa4.02□□□□□ -1.77
PMS1-203ENST00000409593 CREB3O43889 395 aa4.02□□□□□ -1.77
PMS1-203ENST00000409593 RTN3O95197 1032 aaPredicted RBP4.02□□□□□ -1.77
PMS1-203ENST00000409593 KRT9P35527 623 aa4.02□□□□□ -1.77
PMS1-203ENST00000409593 PHEXP78562 749 aa4.02□□□□□ -1.77
PMS1-203ENST00000409593 GOLGA8DPQ0D2H9 430 aa4.02□□□□□ -1.77
PMS1-203ENST00000409593 TBCEQ15813 527 aaPredicted RBP4.02□□□□□ -1.77
PMS1-203ENST00000409593 CCNG2Q16589 344 aa4.02□□□□□ -1.77
PMS1-203ENST00000409593 ACCSLQ4AC99 568 aa4.02□□□□□ -1.77
PMS1-203ENST00000409593 STXBP5Q5T5C0 1151 aa4.02□□□□□ -1.77
PMS1-203ENST00000409593 INTS11Q5TA45 600 aaKnown RBP4.02□□□□□ -1.77
PMS1-203ENST00000409593 TRNP1Q6NT89 227 aa4.02□□□□□ -1.77
PMS1-203ENST00000409593 MEX3BQ6ZN04 569 aaKnown RBP4.02□□□□□ -1.77
PMS1-203ENST00000409593 TRMT1LQ7Z2T5 733 aaKnown RBP4.02□□□□□ -1.77
PMS1-203ENST00000409593 GPR180Q86V85 440 aa4.02□□□□□ -1.77
PMS1-203ENST00000409593 DCUN1D3Q8IWE4 304 aa4.02□□□□□ -1.77
PMS1-203ENST00000409593 DIS3L2Q8IYB7 885 aaKnown RBP4.02□□□□□ -1.77
PMS1-203ENST00000409593 BEST3Q8N1M1 668 aa4.02□□□□□ -1.77
PMS1-203ENST00000409593 IL17RCQ8NAC3 791 aa4.02□□□□□ -1.77
PMS1-203ENST00000409593 IL17REQ8NFR9 667 aa4.02□□□□□ -1.77
PMS1-203ENST00000409593 LRRC8CQ8TDW0 803 aa4.02□□□□□ -1.77
PMS1-203ENST00000409593 IGSF8Q969P0 613 aa4.02□□□□□ -1.77
PMS1-203ENST00000409593 FAM149B1Q96BN6 582 aa4.02□□□□□ -1.77
PMS1-203ENST00000409593 TMEM68Q96MH6 324 aa4.02□□□□□ -1.77
PMS1-203ENST00000409593 QRFPRQ96P65 431 aa4.02□□□□□ -1.77
PMS1-203ENST00000409593 MMP28Q9H239 520 aa4.02□□□□□ -1.77
PMS1-203ENST00000409593 SCPEP1Q9HB40 452 aa4.02□□□□□ -1.77
PMS1-203ENST00000409593 FBRSL1Q9HCM7 1045 aaKnown RBP4.02□□□□□ -1.77
PMS1-203ENST00000409593 TAAR2Q9P1P5 351 aa4.02□□□□□ -1.77
PMS1-203ENST00000409593 ABI3Q9P2A4 366 aa4.02□□□□□ -1.77
PMS1-203ENST00000409593 KLHL20Q9Y2M5 609 aa4.02□□□□□ -1.77
PMS1-203ENST00000409593 MAU2Q9Y6X3 613 aa4.02□□□□□ -1.77
PMS1-203ENST00000409593 CCDC189A1A4V9 331 aa4.01□□□□□ -1.77
PMS1-203ENST00000409593 FGF17O60258 216 aa4.01□□□□□ -1.77
PMS1-203ENST00000409593 PAGE4O60829 102 aa4.01□□□□□ -1.77
PMS1-203ENST00000409593 PBX3P40426 434 aa4.01□□□□□ -1.77
PMS1-203ENST00000409593 CEBPZQ03701 1054 aaKnown RBP4.01□□□□□ -1.77
PMS1-203ENST00000409593 TBX2Q13207 712 aaPredicted RBP4.01□□□□□ -1.77
PMS1-203ENST00000409593 TSTQ16762 297 aaKnown RBP4.01□□□□□ -1.77
PMS1-203ENST00000409593 DCST1Q5T197 706 aa4.01□□□□□ -1.77
PMS1-203ENST00000409593 OTUD3Q5T2D3 398 aaPredicted RBP4.01□□□□□ -1.77
PMS1-203ENST00000409593 TTI2Q6NXR4 508 aa4.01□□□□□ -1.77
PMS1-203ENST00000409593 SRBD1Q8N5C6 995 aaKnown RBP4.01□□□□□ -1.77
PMS1-203ENST00000409593 PCYOX1LQ8NBM8 494 aa4.01□□□□□ -1.77
PMS1-203ENST00000409593 ACVR1CQ8NER5 493 aa4.01□□□□□ -1.77
PMS1-203ENST00000409593 DMBX1Q8NFW5 382 aa4.01□□□□□ -1.77
PMS1-203ENST00000409593 ETNPPLQ8TBG4 499 aa4.01□□□□□ -1.77
PMS1-203ENST00000409593 APBB2Q92870 758 aa4.01□□□□□ -1.77
PMS1-203ENST00000409593 PIGTQ969N2 578 aa4.01□□□□□ -1.77
PMS1-203ENST00000409593 RHBDF1Q96CC6 855 aa4.01□□□□□ -1.77
PMS1-203ENST00000409593 HES6Q96HZ4 224 aa4.01□□□□□ -1.77
PMS1-203ENST00000409593 ZNF583Q96ND8 569 aa4.01□□□□□ -1.77
PMS1-203ENST00000409593 KLHL1Q9NR64 748 aa4.01□□□□□ -1.77
PMS1-203ENST00000409593 ZFP57Q9NU63 452 aa4.01□□□□□ -1.77
PMS1-203ENST00000409593 TMEM30AQ9NV96 361 aa4.01□□□□□ -1.77
PMS1-203ENST00000409593 PGAP2Q9UHJ9 254 aa4.01□□□□□ -1.77
PMS1-203ENST00000409593 PADI3Q9ULW8 664 aa4.01□□□□□ -1.77
PMS1-203ENST00000409593 KIF26BQ2KJY2 2108 aa4.01□□□□□ -1.77
PMS1-203ENST00000409593 PTPRCP08575 1304 aa4.01□□□□□ -1.77
PMS1-203ENST00000409593 C1orf226A1L170 272 aa4□□□□□ -1.77
PMS1-203ENST00000409593 FAM172BPA6NC97 362 aa4□□□□□ -1.77
PMS1-203ENST00000409593 P2RY10O00398 339 aa4□□□□□ -1.77
PMS1-203ENST00000409593 DVL1O14640 695 aa4□□□□□ -1.77
PMS1-203ENST00000409593 HS3ST1O14792 307 aa4□□□□□ -1.77
PMS1-203ENST00000409593 CAPN9O14815 690 aa4□□□□□ -1.77
PMS1-203ENST00000409593 PLGP00747 810 aaPredicted RBP4□□□□□ -1.77
PMS1-203ENST00000409593 POLR2CP19387 275 aaPredicted RBP4□□□□□ -1.77
PMS1-203ENST00000409593 RGS2P41220 211 aa4□□□□□ -1.77
PMS1-203ENST00000409593 AMPHP49418 695 aa4□□□□□ -1.77
PMS1-203ENST00000409593 DVL1P1P54792 670 aaPredicted RBP4□□□□□ -1.77
PMS1-203ENST00000409593 KRTAP10-6P60371 365 aaPredicted RBP4□□□□□ -1.77
PMS1-203ENST00000409593 BRAT1Q6PJG6 821 aa4□□□□□ -1.77
PMS1-203ENST00000409593 SLC26A9Q7LBE3 791 aa4□□□□□ -1.77
PMS1-203ENST00000409593 CPLX4Q7Z7G2 160 aa4□□□□□ -1.77
PMS1-203ENST00000409593 TMEM116Q8NCL8 245 aa4□□□□□ -1.77
PMS1-203ENST00000409593 SLC38A5Q8WUX1 472 aa4□□□□□ -1.77
PMS1-203ENST00000409593 PPP1R13BQ96KQ4 1090 aa4□□□□□ -1.77
PMS1-203ENST00000409593 SYT17Q9BSW7 474 aa4□□□□□ -1.77
PMS1-203ENST00000409593 STRA6Q9BX79 667 aa4□□□□□ -1.77
PMS1-203ENST00000409593 IRAK4Q9NWZ3 460 aa4□□□□□ -1.77
PMS1-203ENST00000409593 CNOT8Q9UFF9 292 aaKnown RBP4□□□□□ -1.77
PMS1-203ENST00000409593 LIMA1Q9UHB6 759 aaKnown RBP4□□□□□ -1.77
PMS1-203ENST00000409593 FBXL2Q9UKC9 423 aa4□□□□□ -1.77
PMS1-203ENST00000409593 TMEM98Q9Y2Y6 226 aa4□□□□□ -1.77
PMS1-203ENST00000409593 A0A1W2PRG0 241 aa4□□□□□ -1.77
PMS1-203ENST00000409593 A0A1W2PS18 150 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms