RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 SP3Q02447 781 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 CPNE9Q8IYJ1 553 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 C2orf73Q8N5S3 287 aaPredicted RBP13.35□□□□□ -0.27
COL6A2-204ENST00000409416 LMNTD1Q8N9Z9 388 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 ADCY4Q8NFM4 1077 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 TSPAN14Q8NG11 270 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 LRCH3Q96II8 777 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 VPS50Q96JG6 964 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 EFHD1Q9BUP0 239 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 RNF208Q9H0X6 261 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 PRDM16Q9HAZ2 1276 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 PREBQ9HCU5 417 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 CROTQ9UKG9 612 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 PKP3Q9Y446 797 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 TRAF6Q9Y4K3 522 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 SLC30A1Q9Y6M5 507 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 PRORSD1PA6NEY8 169 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 MATN3O15232 486 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 IPO13O94829 963 aaKnown RBP13.35□□□□□ -0.27
COL6A2-204ENST00000409416 SNRPB2P08579 225 aaKnown RBP13.35□□□□□ -0.27
COL6A2-204ENST00000409416 LTA4HP09960 611 aaKnown RBP13.35□□□□□ -0.27
COL6A2-204ENST00000409416 CKBP12277 381 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 EEF1DP29692 281 aaKnown RBP13.35□□□□□ -0.27
COL6A2-204ENST00000409416 RGRP47804 291 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 FOXA1P55317 472 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 CLLU1OSQ5K130 101 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 UTS2BQ765I0 119 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 OTOP2Q7RTS6 562 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 CAMK1DQ8IU85 385 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 ARL14EPQ8N8R7 260 aaPredicted RBP13.35□□□□□ -0.27
COL6A2-204ENST00000409416 TMIGD2Q96BF3 282 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 CD3EAPO15446 510 aaKnown RBP13.34□□□□□ -0.27
COL6A2-204ENST00000409416 GSNP06396 782 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 CYP4F8P98187 520 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 LSAMPQ13449 338 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 BOP1Q14137 746 aaKnown RBP13.34□□□□□ -0.27
COL6A2-204ENST00000409416 ARHGEF7Q14155 803 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 TRIM25Q14258 630 aaKnown RBP13.34□□□□□ -0.27
COL6A2-204ENST00000409416 CHST15Q7LFX5 561 aaPredicted RBP13.34□□□□□ -0.27
COL6A2-204ENST00000409416 SPPL2CQ8IUH8 684 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 PBXIP1Q96AQ6 731 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 SPAG4Q9NPE6 437 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 TLR8Q9NR97 1041 aaKnown RBP13.34□□□□□ -0.27
COL6A2-204ENST00000409416 PTCH2Q9Y6C5 1203 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 GNGT2O14610 69 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 CASQ2O14958 399 aaPredicted RBP13.34□□□□□ -0.27
COL6A2-204ENST00000409416 MUSKO15146 869 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 COQ9O75208 318 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 ARNTP27540 789 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 CORO1AP31146 461 aaKnown RBP13.34□□□□□ -0.27
COL6A2-204ENST00000409416 POU4F1Q01851 419 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 SEMA3BQ13214 749 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 DHFR2Q86XF0 187 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 TMEM151AQ8N4L1 468 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 FAM47BQ8NA70 645 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 SPPL2BQ8TCT7 592 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 PYCR2Q96C36 320 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 ULK4Q96C45 1275 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 PPM1MQ96MI6 270 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 TMEM74Q96NL1 305 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 SLC29A1Q99808 456 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 BEGAINQ9BUH8 593 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 CCDC28BQ9BUN5 200 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 CACNA2D2Q9NY47 1150 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 RAB26Q9ULW5 256 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 U3KQV3 271 aa13.34□□□□□ -0.27
COL6A2-204ENST00000409416 C2orf78A6NCI8 922 aa13.33□□□□□ -0.27
COL6A2-204ENST00000409416 PSMD3O43242 534 aa13.33□□□□□ -0.27
COL6A2-204ENST00000409416 TBL1XO60907 577 aa13.33□□□□□ -0.27
COL6A2-204ENST00000409416 PRDX3P30048 256 aaKnown RBP13.33□□□□□ -0.27
COL6A2-204ENST00000409416 AKT1P31749 480 aa13.33□□□□□ -0.27
COL6A2-204ENST00000409416 CAP1Q01518 475 aa13.33□□□□□ -0.27
COL6A2-204ENST00000409416 TBCELQ5QJ74 424 aa13.33□□□□□ -0.27
COL6A2-204ENST00000409416 RSPO2Q6UXX9 243 aaPredicted RBP13.33□□□□□ -0.27
COL6A2-204ENST00000409416 ARHGAP12Q8IWW6 846 aa13.33□□□□□ -0.27
COL6A2-204ENST00000409416 OFCC1Q8IZS5 231 aa13.33□□□□□ -0.27
COL6A2-204ENST00000409416 FBXO39Q8N4B4 442 aa13.33□□□□□ -0.27
COL6A2-204ENST00000409416 MARVELD2Q8N4S9 558 aa13.33□□□□□ -0.27
COL6A2-204ENST00000409416 RTL3Q8N8U3 475 aaKnown RBP13.33□□□□□ -0.27
COL6A2-204ENST00000409416 FNDC5Q8NAU1 212 aa13.33□□□□□ -0.27
COL6A2-204ENST00000409416 CANT1Q8WVQ1 401 aa13.33□□□□□ -0.27
COL6A2-204ENST00000409416 PRICKLE1Q96MT3 831 aaPredicted RBP13.33□□□□□ -0.27
COL6A2-204ENST00000409416 CCDC90BQ9GZT6 254 aa13.33□□□□□ -0.27
COL6A2-204ENST00000409416 GALPQ9UBC7 116 aa13.33□□□□□ -0.27
COL6A2-204ENST00000409416 PIP5K1BO14986 540 aa13.33□□□□□ -0.28
COL6A2-204ENST00000409416 HSPA8P11142 646 aaKnown RBP13.33□□□□□ -0.28
COL6A2-204ENST00000409416 SLC11A1P49279 550 aa13.33□□□□□ -0.28
COL6A2-204ENST00000409416 DIO3P55073 304 aa13.33□□□□□ -0.28
COL6A2-204ENST00000409416 HSPA14Q0VDF9 509 aa13.33□□□□□ -0.28
COL6A2-204ENST00000409416 MAPRE2Q15555 327 aa13.33□□□□□ -0.28
COL6A2-204ENST00000409416 MAPRE1Q15691 268 aaKnown RBP13.33□□□□□ -0.28
COL6A2-204ENST00000409416 NFE2Q16621 373 aaPredicted RBP13.33□□□□□ -0.28
COL6A2-204ENST00000409416 MORN1Q5T089 497 aa13.33□□□□□ -0.28
COL6A2-204ENST00000409416 SLC24A5Q71RS6 500 aa13.33□□□□□ -0.28
COL6A2-204ENST00000409416 RTN4RL1Q86UN2 441 aaPredicted RBP13.33□□□□□ -0.28
COL6A2-204ENST00000409416 MON1AQ86VX9 555 aa13.33□□□□□ -0.28
COL6A2-204ENST00000409416 SOCS4Q8WXH5 440 aa13.33□□□□□ -0.28
COL6A2-204ENST00000409416 MRPS26Q9BYN8 205 aaKnown RBP13.33□□□□□ -0.28
COL6A2-204ENST00000409416 FAF1Q9UNN5 650 aaPredicted RBP13.33□□□□□ -0.28
COL6A2-204ENST00000409416 PCDHGA7Q9Y5G6 932 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms