RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 NEUROD4Q9HD90 331 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 TCF7L2Q9NQB0 619 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 POLR3BQ9NW08 1133 aaPredicted RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 ENOPH1Q9UHY7 261 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 GPR34Q9UPC5 381 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 SLC9A8Q9Y2E8 581 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 HEMK1Q9Y5R4 338 aaPredicted RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 MORC2Q9Y6X9 1032 aaPredicted RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 SNED1Q8TER0 1413 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 COL2A1P02458 1487 aaPredicted RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 WFS1O76024 890 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 PIGRP01833 764 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 RPL4P36578 427 aaKnown RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 CPA2P48052 419 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 WDR5P61964 334 aaKnown RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 MRPS22P82650 360 aaKnown RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 RUNX1T1Q06455 604 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 TRAF2Q12933 501 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 SLC13A2Q13183 592 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 CYTH1Q15438 398 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 SLC36A4Q6YBV0 504 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 ADCK1Q86TW2 530 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 DEFB123Q8N688 67 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 SIDT2Q8NBJ9 832 aaKnown RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 KCNV2Q8TDN2 545 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 SIKE1Q9BRV8 207 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 C16orf70Q9BSU1 422 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 MCMBPQ9BTE3 642 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 ZC4H2Q9NQZ6 224 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 EXD2Q9NVH0 621 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 COQ6Q9Y2Z9 468 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 UPK3BL1B0FP48 263 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 UPK3BL2E5RIL1 263 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 H3BQ06 376 aaPredicted RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 NPC1O15118 1278 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 MMP20O60882 483 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 PKMP14618 531 aaKnown RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 LBPP18428 481 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 ATP5F1P24539 256 aaPredicted RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 CCKBRP32239 447 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 GJA5P36382 358 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 FEN1P39748 380 aaKnown RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 PSMD4P55036 377 aaKnown RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 TAS2R40P59535 323 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 RPL38P63173 70 aaKnown RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 OC90Q02509 493 aaPredicted RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 CCDC142Q17RM4 750 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 FAM98BQ52LJ0 330 aaKnown RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 DGKKQ5KSL6 1271 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 LY6G5CQ5SRR4 150 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 DAB2IPQ5VWQ8 1189 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 KYAT3Q6YP21 454 aaKnown RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 ZNF280BQ86YH2 543 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 GALNT4Q8N4A0 578 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 ATG16L2Q8NAA4 619 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 ZNF384Q8TF68 577 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 FAM83CQ9BQN1 747 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 ANKHQ9HCJ1 492 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 PNPLA8Q9NP80 782 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 PNO1Q9NRX1 252 aaKnown RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 FAM221BA6H8Z2 402 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 YJEFN3A6XGL0 299 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 E7ENQ6 273 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 GPR32O75388 356 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 CTSAP10619 480 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 TSHRP16473 764 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 RPL14P50914 215 aaKnown RBP4.99□□□□□ -1.61
SCN3A-203ENST00000409101 NRG3P56975 720 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 CTBP1Q13363 440 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 RASA2Q15283 850 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 Q6ZVU0 165 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 TMCO2Q7Z6W1 182 aaPredicted RBP4.99□□□□□ -1.61
SCN3A-203ENST00000409101 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.99□□□□□ -1.61
SCN3A-203ENST00000409101 LRRTM4Q86VH4 590 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 REXO1L1PQ8IX06 675 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 DTX3LQ8TDB6 740 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 ZNF473Q8WTR7 871 aaKnown RBP4.99□□□□□ -1.61
SCN3A-203ENST00000409101 DEPDC7Q96QD5 511 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 ZSCAN5AQ9BUG6 496 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 IKZF4Q9H2S9 585 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 MINDY3Q9H8M7 445 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 LMAN1LQ9HAT1 526 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 SPHK2Q9NRA0 654 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 KCNK4Q9NYG8 393 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 NFKBIL1Q9UBC1 381 aaPredicted RBP4.99□□□□□ -1.61
SCN3A-203ENST00000409101 C19orf25Q9UFG5 118 aaPredicted RBP4.99□□□□□ -1.61
SCN3A-203ENST00000409101 TAGLN3Q9UI15 199 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 DUSP12Q9UNI6 340 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 DMTF1Q9Y222 760 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 BTNL10A8MVZ5 291 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 PPP1R37O75864 691 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 GJB5O95377 273 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 C8GP07360 202 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 HLA-EP13747 358 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 JUPP14923 745 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 PAICSP22234 425 aaKnown RBP4.99□□□□□ -1.61
SCN3A-203ENST00000409101 MANFP55145 182 aaKnown RBP4.99□□□□□ -1.61
SCN3A-203ENST00000409101 RPS24P62847 133 aaKnown RBP4.99□□□□□ -1.61
SCN3A-203ENST00000409101 TBL3Q12788 808 aaKnown RBP4.99□□□□□ -1.61
SCN3A-203ENST00000409101 UPP1Q16831 310 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms