RNA–Protein interactions for RNA: ENST00000409064.5

KDM3A-202, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-202ENST00000409064 HAPLN3Q96S86 360 aa10.07□□□□□ -0.8
KDM3A-202ENST00000409064 FAIM2Q9BWQ8 316 aa10.07□□□□□ -0.8
KDM3A-202ENST00000409064 TPSD1Q9BZJ3 242 aa10.07□□□□□ -0.8
KDM3A-202ENST00000409064 PIGVQ9NUD9 493 aa10.07□□□□□ -0.8
KDM3A-202ENST00000409064 WARS2Q9UGM6 360 aaKnown RBP10.07□□□□□ -0.8
KDM3A-202ENST00000409064 DDX60Q8IY21 1712 aaKnown RBP10.07□□□□□ -0.8
KDM3A-202ENST00000409064 NAV1Q8NEY1 1877 aa10.07□□□□□ -0.8
KDM3A-202ENST00000409064 ILVBLA1L0T0 632 aa10.07□□□□□ -0.8
KDM3A-202ENST00000409064 SGTAO43765 313 aa10.07□□□□□ -0.8
KDM3A-202ENST00000409064 TCEA3O75764 348 aa10.07□□□□□ -0.8
KDM3A-202ENST00000409064 CD48P09326 243 aa10.07□□□□□ -0.8
KDM3A-202ENST00000409064 MLLT6P55198 1093 aaPredicted RBP10.07□□□□□ -0.8
KDM3A-202ENST00000409064 AASDHQ4L235 1098 aaPredicted RBP10.07□□□□□ -0.8
KDM3A-202ENST00000409064 BBS7Q8IWZ6 715 aa10.07□□□□□ -0.8
KDM3A-202ENST00000409064 SYBUQ9NX95 663 aa10.07□□□□□ -0.8
KDM3A-202ENST00000409064 SOX13Q9UN79 622 aa10.07□□□□□ -0.8
KDM3A-202ENST00000409064 ADAMTS4O75173 837 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 NTRK1P04629 796 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 ALADP13716 330 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 PKMP14618 531 aaKnown RBP10.06□□□□□ -0.8
KDM3A-202ENST00000409064 CST5P28325 142 aaPredicted RBP10.06□□□□□ -0.8
KDM3A-202ENST00000409064 HOXA11P31270 313 aaPredicted RBP10.06□□□□□ -0.8
KDM3A-202ENST00000409064 NOMO1Q15155 1222 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 SHHQ15465 462 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 CERS6Q6ZMG9 384 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 LDB1Q86U70 411 aaPredicted RBP10.06□□□□□ -0.8
KDM3A-202ENST00000409064 TDHQ8IZJ6 230 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 SPATA6LQ8N4H0 392 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 FAM13CQ8NE31 585 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 OR9Q1Q8NGQ5 310 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 KLHDC7BQ96G42 594 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 DACH2Q96NX9 599 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 PIF1Q9H611 641 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 PRKAG3Q9UGI9 489 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 IL36AQ9UHA7 158 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 VWA7Q9Y334 891 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 TCRBV21S2A2A0A5A6 115 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 UBDO15205 165 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 ENTPD5O75356 428 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 ULK1O75385 1050 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 BGNP21810 368 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 SSR2P43308 183 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 RUNX3Q13761 415 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 RASA2Q15283 850 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 AGKQ53H12 422 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 CAPN13Q6MZZ7 669 aaPredicted RBP10.06□□□□□ -0.8
KDM3A-202ENST00000409064 C12orf66Q96MD2 445 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 CDCA3Q99618 268 aaPredicted RBP10.06□□□□□ -0.8
KDM3A-202ENST00000409064 POMKQ9H5K3 350 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 MTRRQ9UBK8 725 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 COCHO43405 550 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 UBTFL6P0CB48 400 aaPredicted RBP10.06□□□□□ -0.8
KDM3A-202ENST00000409064 ITPKAP23677 461 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 NUDT2P50583 147 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 BLMHQ13867 455 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 TCEAL1Q15170 157 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 TCEAL5Q5H9L2 206 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 ZNF621Q6ZSS3 439 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 CPNE8Q86YQ8 564 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 TRPC4APQ8TEL6 797 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 KCTD13Q8WZ19 329 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 CLP1Q92989 425 aaKnown RBP10.06□□□□□ -0.8
KDM3A-202ENST00000409064 FAM120BQ96EK7 910 aaKnown RBP10.06□□□□□ -0.8
KDM3A-202ENST00000409064 MCCC1Q96RQ3 725 aaPredicted RBP10.06□□□□□ -0.8
KDM3A-202ENST00000409064 EBNA1BP2Q99848 306 aaKnown RBP10.06□□□□□ -0.8
KDM3A-202ENST00000409064 GPR174Q9BXC1 333 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 ATG10Q9H0Y0 220 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 SRMSQ9H3Y6 488 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 RERGLQ9H628 205 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 SLC2A4RGQ9NR83 387 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 SPHK2Q9NRA0 654 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 COMMD8Q9NX08 183 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 ALKBH4Q9NXW9 302 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 SNX6Q9UNH7 406 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 BACE2Q9Y5Z0 518 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 MYH1P12882 1939 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 MYH4Q9Y623 1939 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 TOGARAM1Q9Y4F4 1720 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 MMP20O60882 483 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 RPP40O75818 363 aaKnown RBP10.06□□□□□ -0.8
KDM3A-202ENST00000409064 CDH2P19022 906 aaPredicted RBP10.06□□□□□ -0.8
KDM3A-202ENST00000409064 SERPINB3P29508 390 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 MAD2L1Q13257 205 aaPredicted RBP10.06□□□□□ -0.8
KDM3A-202ENST00000409064 PTCRAQ6ISU1 281 aaPredicted RBP10.06□□□□□ -0.8
KDM3A-202ENST00000409064 LRRC74BQ6ZQY2 392 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 PAGE2Q7Z2X7 111 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 AMZ2Q86W34 360 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.06□□□□□ -0.85e-6■■■■■ 29.9
KDM3A-202ENST00000409064 PCDH20Q8N6Y1 951 aaKnown RBP10.06□□□□□ -0.8
KDM3A-202ENST00000409064 PDLIM7Q9NR12 457 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 HCFC2Q9Y5Z7 792 aa10.06□□□□□ -0.8
KDM3A-202ENST00000409064 MBLAC1A4D2B0 266 aaPredicted RBP10.05□□□□□ -0.8
KDM3A-202ENST00000409064 SLCO1B7G3V0H7 640 aa10.05□□□□□ -0.8
KDM3A-202ENST00000409064 RGS14O43566 566 aa10.05□□□□□ -0.8
KDM3A-202ENST00000409064 ZNF682O95780 498 aa10.05□□□□□ -0.8
KDM3A-202ENST00000409064 PAK4O96013 591 aaPredicted RBP10.05□□□□□ -0.8
KDM3A-202ENST00000409064 TSPAN8P19075 237 aa10.05□□□□□ -0.8
KDM3A-202ENST00000409064 CTSOP43234 321 aaPredicted RBP10.05□□□□□ -0.8
KDM3A-202ENST00000409064 PXNP49023 591 aaPredicted RBP10.05□□□□□ -0.8
KDM3A-202ENST00000409064 AQP5P55064 265 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms