RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 SMIM24O75264 130 aa18.87■□□□□ 0.61
USP39-202ENST00000409025 CLDN7O95471 211 aa18.87■□□□□ 0.61
USP39-202ENST00000409025 KRT16P08779 473 aa18.87■□□□□ 0.61
USP39-202ENST00000409025 CD9P21926 228 aa18.87■□□□□ 0.61
USP39-202ENST00000409025 PPARGP37231 505 aaPredicted RBP18.87■□□□□ 0.61
USP39-202ENST00000409025 ADARP55265 1226 aaKnown RBP18.87■□□□□ 0.61
USP39-202ENST00000409025 SHHQ15465 462 aa18.87■□□□□ 0.61
USP39-202ENST00000409025 CDKN3Q16667 212 aa18.87■□□□□ 0.61
USP39-202ENST00000409025 SEL1L3Q68CR1 1132 aa18.87■□□□□ 0.61
USP39-202ENST00000409025 KIAA0907Q7Z7F0 614 aaPredicted RBP18.87■□□□□ 0.61
USP39-202ENST00000409025 ZSWIM9Q86XI8 627 aa18.87■□□□□ 0.61
USP39-202ENST00000409025 C12orf76Q8N812 135 aaPredicted RBP18.87■□□□□ 0.61
USP39-202ENST00000409025 NAT16Q8N8M0 369 aa18.87■□□□□ 0.61
USP39-202ENST00000409025 PTERQ96BW5 349 aa18.87■□□□□ 0.61
USP39-202ENST00000409025 ECHDC3Q96DC8 303 aa18.87■□□□□ 0.61
USP39-202ENST00000409025 CCDC106Q9BWC9 280 aa18.87■□□□□ 0.61
USP39-202ENST00000409025 TFB2MQ9H5Q4 396 aaKnown RBP18.87■□□□□ 0.61
USP39-202ENST00000409025 ZDHHC6Q9H6R6 413 aa18.87■□□□□ 0.61
USP39-202ENST00000409025 KLC4Q9NSK0 619 aa18.87■□□□□ 0.61
USP39-202ENST00000409025 VTI1BQ9UEU0 232 aa18.87■□□□□ 0.61
USP39-202ENST00000409025 APPL1Q9UKG1 709 aa18.87■□□□□ 0.61
USP39-202ENST00000409025 MED16Q9Y2X0 877 aa18.87■□□□□ 0.61
USP39-202ENST00000409025 OAS3Q9Y6K5 1087 aaKnown RBP18.87■□□□□ 0.61
USP39-202ENST00000409025 HDAC3O15379 428 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 KCNA5P22460 613 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 PAQR3Q6TCH7 311 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 FAM151BQ6UXP7 276 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 TMC5Q6UXY8 1006 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 DPY19L3Q6ZPD9 716 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 RHEBL1Q8TAI7 183 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 ZNF641Q96N77 438 aaPredicted RBP18.86■□□□□ 0.61
USP39-202ENST00000409025 LYSMD1Q96S90 227 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 TTC1Q99614 292 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 GPR21Q99679 349 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 DERL2Q9GZP9 239 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 DUS2Q9NX74 493 aaKnown RBP18.86■□□□□ 0.61
USP39-202ENST00000409025 ZDHHC2Q9UIJ5 367 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 ERVW-1Q9UQF0 538 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 STK38LQ9Y2H1 464 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 YBX2Q9Y2T7 364 aaKnown RBP18.86■□□□□ 0.61
USP39-202ENST00000409025 NUP210Q8TEM1 1887 aaPredicted RBP18.86■□□□□ 0.61
USP39-202ENST00000409025 A0A1W2PQ67 120 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 PRAMEF1O95521 474 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 ESR1P03372 595 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 TPBGLP0DKB5 382 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 WEE1P30291 646 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 RECQLP46063 649 aaPredicted RBP18.86■□□□□ 0.61
USP39-202ENST00000409025 NRIP1P48552 1158 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 ATP6V0D1P61421 351 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 DHCR24Q15392 516 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 DUSP6Q16828 381 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 SETMARQ53H47 684 aaPredicted RBP18.86■□□□□ 0.61
USP39-202ENST00000409025 CTSL3PQ5NE16 218 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 USP45Q70EL2 814 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 PACS2Q86VP3 889 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 NKAPQ8N5F7 415 aaKnown RBP18.86■□□□□ 0.61
USP39-202ENST00000409025 KIAA1958Q8N8K9 716 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 VOPP1Q96AW1 172 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 PHF21BQ96EK2 531 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 SCRN2Q96FV2 425 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 SHCBP1LQ9BZQ2 653 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 EML4Q9HC35 981 aaKnown RBP18.86■□□□□ 0.61
USP39-202ENST00000409025 TRMT6Q9UJA5 497 aaKnown RBP18.86■□□□□ 0.61
USP39-202ENST00000409025 PPIL1Q9Y3C6 166 aa18.86■□□□□ 0.61
USP39-202ENST00000409025 BMP1P13497 986 aa18.85■□□□□ 0.61
USP39-202ENST00000409025 ITGALP20701 1170 aa18.85■□□□□ 0.61
USP39-202ENST00000409025 IMPDH1P20839 514 aa18.85■□□□□ 0.61
USP39-202ENST00000409025 NNMTP40261 264 aa18.85■□□□□ 0.61
USP39-202ENST00000409025 KCNC1P48547 511 aa18.85■□□□□ 0.61
USP39-202ENST00000409025 NFKB2Q00653 900 aa18.85■□□□□ 0.61
USP39-202ENST00000409025 GRAMD4Q6IC98 578 aa18.85■□□□□ 0.61
USP39-202ENST00000409025 TPRG1Q6ZUI0 275 aa18.85■□□□□ 0.61
USP39-202ENST00000409025 Q6ZVU0 165 aa18.85■□□□□ 0.61
USP39-202ENST00000409025 SNX20Q7Z614 316 aa18.85■□□□□ 0.61
USP39-202ENST00000409025 TREML1Q86YW5 311 aa18.85■□□□□ 0.61
USP39-202ENST00000409025 PLPP6Q8IY26 295 aa18.85■□□□□ 0.61
USP39-202ENST00000409025 CBARPQ8N350 705 aaPredicted RBP18.85■□□□□ 0.61
USP39-202ENST00000409025 PCDHB1Q9Y5F3 818 aa18.85■□□□□ 0.61
USP39-202ENST00000409025 NPIPB15A6NHN6 443 aaPredicted RBP18.84■□□□□ 0.61
USP39-202ENST00000409025 GOLGA8CPA6NN73 597 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 E5RI56 91 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 MGRN1O60291 552 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 NIPSNAP2O75323 286 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 UGT2B4P06133 528 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 ENO1P06733 434 aaKnown RBP18.84■□□□□ 0.61
USP39-202ENST00000409025 SPAM1P38567 509 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 UBAP2LQ14157 1087 aaKnown RBP18.84■□□□□ 0.61
USP39-202ENST00000409025 SLC9B1Q4ZJI4 515 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 TMEM215Q68D42 235 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 UGT3A1Q6NUS8 523 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 STAG3L4Q8TBR4 150 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 MAPK15Q8TD08 544 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 OSCP1Q8WVF1 389 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 KCNJ9Q92806 393 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 KIAA1191Q96A73 305 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 L3HYPDHQ96EM0 354 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 LRRC3BQ96PB8 259 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 BTBD10Q9BSF8 475 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 TBC1D10AQ9BXI6 508 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 P2RY12Q9H244 342 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms