RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 TBC1D3KA0A087X1G2 549 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 HEATR9A2RTY3 570 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 TBC1D3FA6NER0 549 aaPredicted RBP8.33□□□□□ -1.08
GPC3-203ENST00000406757 IGLON5A6NGN9 336 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 TBC1D3LB9A6J9 549 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 AREL1O15033 823 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 GPR37O15354 613 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 EIF3HO15372 352 aaKnown RBP eCLIP8.33□□□□□ -1.081e-20■□□□□ 8.8
GPC3-203ENST00000406757 STX7O15400 261 aaKnown RBP8.33□□□□□ -1.08
GPC3-203ENST00000406757 GPR39O43194 453 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 TBC1D3HP0C7X1 549 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 ERVK-10P10266 1014 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 CYP2A6P11509 494 aaPredicted RBP8.33□□□□□ -1.08
GPC3-203ENST00000406757 GM2AP17900 193 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 CSRP1P21291 193 aaKnown RBP8.33□□□□□ -1.08
GPC3-203ENST00000406757 LPOP22079 712 aaPredicted RBP8.33□□□□□ -1.08
GPC3-203ENST00000406757 MAT2AP31153 395 aaKnown RBP8.33□□□□□ -1.08
GPC3-203ENST00000406757 ACSL1P33121 698 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 CA5AP35218 305 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 TPMTP51580 245 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 RPL26P61254 145 aaKnown RBP8.33□□□□□ -1.08
GPC3-203ENST00000406757 ARHGEF7Q14155 803 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 EFTUD2Q15029 972 aaKnown RBP eCLIP8.33□□□□□ -1.082e-10■■■□□ 15.7
GPC3-203ENST00000406757 BRD3Q15059 726 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 ACOX1Q15067 660 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 TAF1AQ15573 450 aaPredicted RBP8.33□□□□□ -1.08
GPC3-203ENST00000406757 UAP1Q16222 522 aaPredicted RBP8.33□□□□□ -1.08
GPC3-203ENST00000406757 TRIM61Q5EBN2 209 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 BEND6Q5SZJ8 279 aaPredicted RBP8.33□□□□□ -1.08
GPC3-203ENST00000406757 SEL1L3Q68CR1 1132 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 TBC1D3GQ6DHY5 549 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 TBC1D3CQ6IPX1 549 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 ERAP2Q6P179 960 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 TRMT10BQ6PF06 316 aaKnown RBP8.33□□□□□ -1.08
GPC3-203ENST00000406757 LIPIQ6XZB0 460 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 KDM7AQ6ZMT4 941 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 C3orf62Q6ZUJ4 267 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 DPPA4Q7L190 304 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 TBC1D3Q8IZP1 549 aaPredicted RBP8.33□□□□□ -1.08
GPC3-203ENST00000406757 EIF1ADQ8N9N8 165 aaKnown RBP8.33□□□□□ -1.08
GPC3-203ENST00000406757 HCAR2Q8TDS4 363 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 HDAC10Q969S8 669 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 SPACA7Q96KW9 195 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 TBATAQ96M53 351 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 MCCC1Q96RQ3 725 aaPredicted RBP8.33□□□□□ -1.08
GPC3-203ENST00000406757 RANBP9Q96S59 729 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 KIFC1Q9BW19 673 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 SCNM1Q9BWG6 230 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 NUSAP1Q9BXS6 441 aaKnown RBP8.33□□□□□ -1.08
GPC3-203ENST00000406757 FRMD8Q9BZ67 464 aaPredicted RBP8.33□□□□□ -1.08
GPC3-203ENST00000406757 FAM129AQ9BZQ8 928 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 FOXP3Q9BZS1 431 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 IL22Q9GZX6 179 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 EPB41L4BQ9H329 900 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 ZFYVE1Q9HBF4 777 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 FSCN3Q9NQT6 498 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 ITM2CQ9NQX7 267 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 FKBPLQ9UIM3 349 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 MBD1Q9UIS9 605 aaPredicted RBP8.33□□□□□ -1.08
GPC3-203ENST00000406757 RPL26L1Q9UNX3 145 aaKnown RBP8.33□□□□□ -1.08
GPC3-203ENST00000406757 NCKAP1Q9Y2A7 1128 aa8.33□□□□□ -1.08
GPC3-203ENST00000406757 ZCWPW2A0A1B0GU75 182 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 FAM237BA0A1B0GVD1 139 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 A0A1W2PQ67 120 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 A0A1W2PQU0 124 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 CCDC162PA2VCL2 907 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 MROH6A6NGR9 719 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 C2orf81A6NN90 581 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 CXorf49A8MYA2 514 aaPredicted RBP8.32□□□□□ -1.08
GPC3-203ENST00000406757 AP3B1O00203 1094 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 RIPK2O43353 540 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 LZTS3O60299 673 aaPredicted RBP8.32□□□□□ -1.08
GPC3-203ENST00000406757 UGT1A9O60656 530 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 RNGTTO60942 597 aaKnown RBP8.32□□□□□ -1.08
GPC3-203ENST00000406757 ERLIN1O75477 346 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 VAPBO95292 243 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 CRTAMO95727 393 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 SHBGP04278 402 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 CFIP05156 583 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 ELFN1P0C7U0 828 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 H2AFXP16104 143 aaPredicted RBP8.32□□□□□ -1.08
GPC3-203ENST00000406757 BPIP17213 487 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 ENGP17813 658 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 PGAM1P18669 254 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 UGT1A6P19224 532 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 UGT1A1P22309 533 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 UGT1A4P22310 534 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 UGT1A3P35503 534 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 UGT1A5P35504 534 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 HSD17B3P37058 310 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 MMP12P39900 470 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 ETV3P41162 512 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 CDKN1CP49918 316 aaPredicted RBP8.32□□□□□ -1.08
GPC3-203ENST00000406757 ZNF140P52738 457 aaPredicted RBP8.32□□□□□ -1.08
GPC3-203ENST00000406757 ADPRHP54922 357 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 PPP2CBP62714 309 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 PPP2CAP67775 309 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 SLC29A2Q14542 456 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 CRYMQ14894 314 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 SLMAPQ14BN4 828 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms