RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 STC1P52823 247 aa12.8□□□□□ -0.36
PRAME-206ENST00000406503 CDH6P55285 790 aa12.8□□□□□ -0.36
PRAME-206ENST00000406503 MMRN1Q13201 1228 aa12.8□□□□□ -0.36
PRAME-206ENST00000406503 ASIC2Q16515 512 aa12.8□□□□□ -0.36
PRAME-206ENST00000406503 ARMC12Q5T9G4 340 aa12.8□□□□□ -0.36
PRAME-206ENST00000406503 ANKS6Q68DC2 871 aa12.8□□□□□ -0.36
PRAME-206ENST00000406503 TMEM71Q6P5X7 295 aa12.8□□□□□ -0.36
PRAME-206ENST00000406503 SASS6Q6UVJ0 657 aa12.8□□□□□ -0.36
PRAME-206ENST00000406503 MARK2Q7KZI7 788 aaKnown RBP12.8□□□□□ -0.36
PRAME-206ENST00000406503 TIPARPQ7Z3E1 657 aaKnown RBP12.8□□□□□ -0.36
PRAME-206ENST00000406503 ARHGAP22Q7Z5H3 698 aa12.8□□□□□ -0.36
PRAME-206ENST00000406503 CPNE8Q86YQ8 564 aa12.8□□□□□ -0.36
PRAME-206ENST00000406503 SFRP1Q8N474 314 aa12.8□□□□□ -0.36
PRAME-206ENST00000406503 ATPAF2Q8N5M1 289 aa12.8□□□□□ -0.36
PRAME-206ENST00000406503 ZSCAN1Q8NBB4 408 aa12.8□□□□□ -0.36
PRAME-206ENST00000406503 AGBL5Q8NDL9 886 aa12.8□□□□□ -0.36
PRAME-206ENST00000406503 FAM71BQ8TC56 605 aa12.8□□□□□ -0.36
PRAME-206ENST00000406503 MAML1Q92585 1016 aa12.8□□□□□ -0.36
PRAME-206ENST00000406503 AP2M1Q96CW1 435 aa12.8□□□□□ -0.36
PRAME-206ENST00000406503 NT5MQ9NPB1 228 aa12.8□□□□□ -0.36
PRAME-206ENST00000406503 KCNK4Q9NYG8 393 aa12.8□□□□□ -0.36
PRAME-206ENST00000406503 AKAP7Q9P0M2 348 aaPredicted RBP12.8□□□□□ -0.36
PRAME-206ENST00000406503 PILRAQ9UKJ1 303 aa12.8□□□□□ -0.36
PRAME-206ENST00000406503 SCINQ9Y6U3 715 aa12.8□□□□□ -0.36
PRAME-206ENST00000406503 PRRC2CQ9Y520 2896 aaKnown RBP12.8□□□□□ -0.36
PRAME-206ENST00000406503 SPTAN1Q13813 2472 aaKnown RBP12.79□□□□□ -0.36
PRAME-206ENST00000406503 LOC101059948A0A1B0GTJ6 334 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 EFCAB7A8K855 629 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 FADS2P1A8MWK0 482 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 B4E171 279 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 DUX1O43812 170 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 MAP3K6O95382 1288 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 SFTPCP11686 197 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 ARL4AP40617 200 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 TSPAN7P41732 249 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 ARSEP51690 589 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 POLE2P56282 527 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 GPLD1P80108 840 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 DSC2Q02487 901 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 TLE1Q04724 770 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 BOLA3Q53S33 107 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 COLEC12Q5KU26 742 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 MARC1Q5VT66 337 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 HGSNATQ68CP4 663 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 USP45Q70EL2 814 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 ZNF765Q7L2R6 523 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 NLRP8Q86W28 1048 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 PTRH1Q86Y79 214 aaKnown RBP12.79□□□□□ -0.36
PRAME-206ENST00000406503 CACNA2D3Q8IZS8 1091 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 IL22RA1Q8N6P7 574 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 ARRDC2Q8TBH0 407 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 TEKT4Q8WW24 435 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 RTP4Q96DX8 246 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 NAP1L5Q96NT1 182 aaPredicted RBP12.79□□□□□ -0.36
PRAME-206ENST00000406503 TDRD1Q9BXT4 1180 aaKnown RBP12.79□□□□□ -0.36
PRAME-206ENST00000406503 EPN3Q9H201 632 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 ADNPQ9H2P0 1102 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 APMAPQ9HDC9 416 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 SLC39A1Q9NY26 324 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 TBC1D29Q9UFV1 150 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 PRKAB1Q9Y478 270 aa12.79□□□□□ -0.36
PRAME-206ENST00000406503 TEX15Q9BXT5 2789 aa12.78□□□□□ -0.36
PRAME-206ENST00000406503 INPP4BO15327 924 aa12.78□□□□□ -0.36
PRAME-206ENST00000406503 NKX2-8O15522 239 aa12.78□□□□□ -0.36
PRAME-206ENST00000406503 ATP1A1P05023 1023 aaKnown RBP12.78□□□□□ -0.36
PRAME-206ENST00000406503 ZNF30P17039 623 aa12.78□□□□□ -0.36
PRAME-206ENST00000406503 CSTF2P33240 577 aaKnown RBP eCLIP12.78□□□□□ -0.36
PRAME-206ENST00000406503 ATP1A2P50993 1020 aa12.78□□□□□ -0.36
PRAME-206ENST00000406503 NIPAL4Q0D2K0 466 aa12.78□□□□□ -0.36
PRAME-206ENST00000406503 KCNAB2Q13303 367 aa12.78□□□□□ -0.36
PRAME-206ENST00000406503 SKIDA1Q1XH10 827 aa12.78□□□□□ -0.36
PRAME-206ENST00000406503 FAM182AQ5T1J6 154 aa12.78□□□□□ -0.36
PRAME-206ENST00000406503 NCBP2-AS2Q69YL0 99 aa12.78□□□□□ -0.36
PRAME-206ENST00000406503 BORAQ6PGQ7 559 aa12.78□□□□□ -0.36
PRAME-206ENST00000406503 FAM129CQ86XR2 697 aa12.78□□□□□ -0.36
PRAME-206ENST00000406503 GALNT13Q8IUC8 556 aa12.78□□□□□ -0.36
PRAME-206ENST00000406503 NIPA2Q8N8Q9 360 aa12.78□□□□□ -0.36
PRAME-206ENST00000406503 ZNF564Q8TBZ8 553 aaPredicted RBP12.78□□□□□ -0.36
PRAME-206ENST00000406503 LRRN4Q8WUT4 740 aa12.78□□□□□ -0.36
PRAME-206ENST00000406503 CTRCQ99895 268 aa12.78□□□□□ -0.36
PRAME-206ENST00000406503 DPYSL5Q9BPU6 564 aa12.78□□□□□ -0.36
PRAME-206ENST00000406503 RIOK2Q9BVS4 552 aaKnown RBP12.78□□□□□ -0.36
PRAME-206ENST00000406503 CHKBQ9Y259 395 aa12.78□□□□□ -0.36
PRAME-206ENST00000406503 SPTBP11277 2137 aa12.77□□□□□ -0.36
PRAME-206ENST00000406503 SHANK1Q9Y566 2161 aa12.77□□□□□ -0.36
PRAME-206ENST00000406503 A0A1B0GTH6 734 aa12.77□□□□□ -0.37
PRAME-206ENST00000406503 CLDN7O95471 211 aa12.77□□□□□ -0.37
PRAME-206ENST00000406503 MYBL1P10243 752 aa12.77□□□□□ -0.37
PRAME-206ENST00000406503 SERPINB6P35237 376 aa12.77□□□□□ -0.37
PRAME-206ENST00000406503 GARSP41250 739 aaKnown RBP12.77□□□□□ -0.37
PRAME-206ENST00000406503 MC2RQ01718 297 aa12.77□□□□□ -0.37
PRAME-206ENST00000406503 TYRO3Q06418 890 aa12.77□□□□□ -0.37
PRAME-206ENST00000406503 KLHL30Q0D2K2 578 aa12.77□□□□□ -0.37
PRAME-206ENST00000406503 GALNT2Q10471 571 aa12.77□□□□□ -0.37
PRAME-206ENST00000406503 PAFAH1B3Q15102 231 aaKnown RBP12.77□□□□□ -0.37
PRAME-206ENST00000406503 ATP13A4Q4VNC1 1196 aa12.77□□□□□ -0.37
PRAME-206ENST00000406503 HENMT1Q5T8I9 393 aaKnown RBP12.77□□□□□ -0.37
PRAME-206ENST00000406503 BBS5Q8N3I7 341 aa12.77□□□□□ -0.37
PRAME-206ENST00000406503 EXD1Q8NHP7 514 aa12.77□□□□□ -0.37
PRAME-206ENST00000406503 EID2BQ96D98 161 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms