RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 STOML1Q9UBI4 398 aa9.07□□□□□ -0.96
LIG4-202ENST00000405925 POLG2Q9UHN1 485 aa9.07□□□□□ -0.96
LIG4-202ENST00000405925 SCN4AP35499 1836 aa9.07□□□□□ -0.96
LIG4-202ENST00000405925 RGPD3A6NKT7 1758 aaPredicted RBP9.07□□□□□ -0.96
LIG4-202ENST00000405925 RGPD4Q7Z3J3 1758 aa9.07□□□□□ -0.96
LIG4-202ENST00000405925 LINC01553A4QN01 128 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 C5orf58C9J3I9 102 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 TK2O00142 265 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 AGRPO00253 132 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 MAFKO60675 156 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 ATG13O75143 517 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 CLDN7O95471 211 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 MAPK1P28482 360 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 GPC1P35052 558 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 PTPRCAPQ14761 206 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 CPSF6Q16630 551 aaKnown RBP eCLIP9.06□□□□□ -0.96
LIG4-202ENST00000405925 FUT11Q495W5 492 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 CHRDL2Q6WN34 429 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 PIP4K2CQ8TBX8 421 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 CENPTQ96BT3 561 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 ARMC5Q96C12 935 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 SIGLEC10Q96LC7 697 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 ECSITQ9BQ95 431 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 LINC00597Q9H2U6 94 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 IL36AQ9UHA7 158 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 NENFQ9UMX5 172 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 LRRC72A6NJI9 287 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 TMEM114B3SHH9 223 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 K7ERQ8 282 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 SNX3O60493 162 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 MTX2O75431 263 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 FSBPO95073 299 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 BPGMP07738 259 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 RPSAP08865 295 aaKnown RBP9.06□□□□□ -0.96
LIG4-202ENST00000405925 EEF1DP29692 281 aaKnown RBP9.06□□□□□ -0.96
LIG4-202ENST00000405925 CLNS1AP54105 237 aaKnown RBP9.06□□□□□ -0.96
LIG4-202ENST00000405925 AP2B1P63010 937 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 ACSM2AQ08AH3 577 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 DHCR24Q15392 516 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 CYP2A13Q16696 494 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 ACSM2BQ68CK6 577 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 DNAJC14Q6Y2X3 702 aaPredicted RBP9.06□□□□□ -0.96
LIG4-202ENST00000405925 DPY19L3Q6ZPD9 716 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 ZDHHC14Q8IZN3 488 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 MTFMTQ96DP5 389 aaKnown RBP9.06□□□□□ -0.96
LIG4-202ENST00000405925 DPY30Q9C005 99 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 ADAM7Q9H2U9 754 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 ZDHHC7Q9NXF8 308 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 CCDC167Q9P0B6 97 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 SH3BP4Q9P0V3 963 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 CIDEBQ9UHD4 219 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 V9GYQ6 96 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 RFXAPO00287 272 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 LMNAP02545 664 aaKnown RBP9.06□□□□□ -0.96
LIG4-202ENST00000405925 ESR1P03372 595 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 HOXB2P14652 356 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 OGNP20774 298 aaKnown RBP9.06□□□□□ -0.96
LIG4-202ENST00000405925 CRHR1P34998 444 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 PTGER3P43115 390 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 ALDH9A1P49189 494 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 GTF2A1P52655 376 aaPredicted RBP9.06□□□□□ -0.96
LIG4-202ENST00000405925 CYLC2Q14093 348 aaPredicted RBP9.06□□□□□ -0.96
LIG4-202ENST00000405925 BRAT1Q6PJG6 821 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 SPOCK2Q92563 424 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 JADE3Q92613 823 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 SLC46A2Q9BY10 475 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 POLMQ9NP87 494 aaPredicted RBP9.06□□□□□ -0.96
LIG4-202ENST00000405925 TMEM216Q9P0N5 145 aa9.06□□□□□ -0.96
LIG4-202ENST00000405925 TRBV23OR9-2A0A075B6M9 112 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 IQCF5A8MTL0 148 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 WNT9AO14904 365 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 PEX11AO75192 247 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 WDR47O94967 919 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 NEK3P51956 506 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 GPX6P59796 221 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 USP4Q13107 963 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 NFYCQ13952 458 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 SHHQ15465 462 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 PGS1Q32NB8 556 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 KRT80Q6KB66 452 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 CAND1Q86VP6 1230 aaKnown RBP9.05□□□□□ -0.96
LIG4-202ENST00000405925 TDRPQ86YL5 185 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 FAM9CQ8IZT9 166 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 DCBLD1Q8N8Z6 715 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 SH3GL2Q99962 352 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 RNF38Q9H0F5 515 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 VCX3AQ9NNX9 186 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 LGALS13Q9UHV8 139 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 BTRCQ9Y297 605 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 CXCL10P02778 98 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 AMD1P17707 334 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 ARHGDIAP52565 204 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 TAF11Q15544 211 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 MFSD4BQ5TF39 518 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 NAPRTQ6XQN6 538 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 IGDCC3Q8IVU1 814 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 SLC44A2Q8IWA5 706 aaPredicted RBP9.05□□□□□ -0.96
LIG4-202ENST00000405925 CFAP206Q8IYR0 622 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 RXFP1Q9HBX9 757 aa9.05□□□□□ -0.96
LIG4-202ENST00000405925 CAPN10Q9HC96 672 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms