RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 UNC5AQ6ZN44 842 aa33.13■■■□□ 2.89
CSNK1E-204ENST00000403904 PRR23BQ6ZRT6 265 aa33.13■■■□□ 2.89
CSNK1E-204ENST00000403904 RGL4Q8IZJ4 473 aa33.13■■■□□ 2.89
CSNK1E-204ENST00000403904 MIR1-1HGQ9H1L0 117 aa33.13■■■□□ 2.89
CSNK1E-204ENST00000403904 APPL1Q9UKG1 709 aa33.13■■■□□ 2.89
CSNK1E-204ENST00000403904 CACNA1HO95180 2353 aa33.12■■■□□ 2.89
CSNK1E-204ENST00000403904 CCDC162PA2VCL2 907 aa33.12■■■□□ 2.89
CSNK1E-204ENST00000403904 OR51F1A6NGY5 319 aa33.12■■■□□ 2.89
CSNK1E-204ENST00000403904 PRAMEF26H0Y7S4 382 aa33.12■■■□□ 2.89
CSNK1E-204ENST00000403904 H7C0S8 307 aa33.12■■■□□ 2.89
CSNK1E-204ENST00000403904 MC4RP32245 332 aa33.12■■■□□ 2.89
CSNK1E-204ENST00000403904 IGFALSP35858 605 aa33.12■■■□□ 2.89
CSNK1E-204ENST00000403904 PRAMEP78395 509 aa33.12■■■□□ 2.89
CSNK1E-204ENST00000403904 SMAD1Q15797 465 aaKnown RBP33.12■■■□□ 2.89
CSNK1E-204ENST00000403904 CHRNA6Q15825 494 aa33.12■■■□□ 2.89
CSNK1E-204ENST00000403904 RAET1GQ6H3X3 334 aa33.12■■■□□ 2.89
CSNK1E-204ENST00000403904 CEP128Q6ZU80 1094 aa33.12■■■□□ 2.89
CSNK1E-204ENST00000403904 DENND6BQ8NEG7 585 aa33.12■■■□□ 2.89
CSNK1E-204ENST00000403904 OR6P1Q8NGX9 317 aa33.12■■■□□ 2.89
CSNK1E-204ENST00000403904 GPR39O43194 453 aa33.11■■■□□ 2.89
CSNK1E-204ENST00000403904 RHOBTB1O94844 696 aa33.11■■■□□ 2.89
CSNK1E-204ENST00000403904 VAPBO95292 243 aa33.11■■■□□ 2.89
CSNK1E-204ENST00000403904 PRAMEF1O95521 474 aa33.11■■■□□ 2.89
CSNK1E-204ENST00000403904 TTC4O95801 387 aa33.11■■■□□ 2.89
CSNK1E-204ENST00000403904 ITPKAP23677 461 aa33.11■■■□□ 2.89
CSNK1E-204ENST00000403904 PTPN5P54829 565 aa33.11■■■□□ 2.89
CSNK1E-204ENST00000403904 INPP5AQ14642 412 aa33.11■■■□□ 2.89
CSNK1E-204ENST00000403904 PNCKQ6P2M8 343 aa33.11■■■□□ 2.89
CSNK1E-204ENST00000403904 CAPN12Q6ZSI9 719 aa33.11■■■□□ 2.89
CSNK1E-204ENST00000403904 NLRP8Q86W28 1048 aa33.11■■■□□ 2.89
CSNK1E-204ENST00000403904 PALM2Q8IXS6 379 aa33.11■■■□□ 2.89
CSNK1E-204ENST00000403904 DNASE2BQ8WZ79 361 aa33.11■■■□□ 2.89
CSNK1E-204ENST00000403904 IL1RAPL1Q9NZN1 696 aa33.11■■■□□ 2.89
CSNK1E-204ENST00000403904 DYNC1LI1Q9Y6G9 523 aaKnown RBP33.11■■■□□ 2.89
CSNK1E-204ENST00000403904 SRP72O76094 671 aaKnown RBP33.1■■■□□ 2.89
CSNK1E-204ENST00000403904 SOD1P00441 154 aa33.1■■■□□ 2.89
CSNK1E-204ENST00000403904 ARNTP27540 789 aa33.1■■■□□ 2.89
CSNK1E-204ENST00000403904 GPR1P46091 355 aa33.1■■■□□ 2.89
CSNK1E-204ENST00000403904 WDR45BQ5MNZ6 344 aa33.1■■■□□ 2.89
CSNK1E-204ENST00000403904 LYSMD4Q5XG99 296 aa33.1■■■□□ 2.89
CSNK1E-204ENST00000403904 ZC3H14Q6PJT7 736 aaKnown RBP33.1■■■□□ 2.89
CSNK1E-204ENST00000403904 TRAM1L1Q8N609 369 aa33.1■■■□□ 2.89
CSNK1E-204ENST00000403904 TMEM145Q8NBT3 493 aa33.1■■■□□ 2.89
CSNK1E-204ENST00000403904 SERBP1Q8NC51 408 aaKnown RBP eCLIP33.1■■■□□ 2.89
CSNK1E-204ENST00000403904 ZSCAN5AQ9BUG6 496 aa33.1■■■□□ 2.89
CSNK1E-204ENST00000403904 FAM169AQ9Y6X4 670 aa33.1■■■□□ 2.89
CSNK1E-204ENST00000403904 TNRC6BQ9UPQ9 1833 aaKnown RBP33.1■■■□□ 2.89
CSNK1E-204ENST00000403904 POM121BA6NF01 834 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 FADS2P1A8MWK0 482 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 H0Y8X5 98 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 FPGTO14772 594 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 UGT1A9O60656 530 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 GOT2P00505 430 aaKnown RBP33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 PAMP19021 973 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 UGT1A6P19224 532 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 UGT1A1P22309 533 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 UGT1A4P22310 534 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 MCM3P25205 808 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 UGT1A3P35503 534 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 UGT1A5P35504 534 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 ATP13A5Q4VNC0 1218 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 SPANXN3Q5MJ09 141 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 KIAA0930Q6ICG6 404 aaPredicted RBP33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 UNC5BQ8IZJ1 945 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 SLC6A18Q96N87 628 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 FAM96AQ9H5X1 160 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 UGT1A7Q9HAW7 530 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 UGT1A10Q9HAW8 530 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 UGT1A8Q9HAW9 530 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 RAB21Q9UL25 225 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 SLC30A1Q9Y6M5 507 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 SSTR1P30872 391 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 ARCN1P48444 511 aaKnown RBP33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 LPAL2Q16609 132 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 STEAP4Q687X5 459 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 GCNT7Q6ZNI0 430 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 RELL1Q8IUW5 271 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 ZNF398Q8TD17 642 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 BMFQ96LC9 184 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 ASB8Q9H765 288 aa33.09■■■□□ 2.89
CSNK1E-204ENST00000403904 GOLGA8KD6RF30 607 aa33.08■■■□□ 2.89
CSNK1E-204ENST00000403904 GOLGA8TH3BQL2 631 aa33.08■■■□□ 2.89
CSNK1E-204ENST00000403904 PRSS56P0CW18 603 aa33.08■■■□□ 2.89
CSNK1E-204ENST00000403904 TSHRP16473 764 aa33.08■■■□□ 2.89
CSNK1E-204ENST00000403904 CA5AP35218 305 aa33.08■■■□□ 2.89
CSNK1E-204ENST00000403904 STAT4Q14765 748 aa33.08■■■□□ 2.89
CSNK1E-204ENST00000403904 KYNUQ16719 465 aa33.08■■■□□ 2.89
CSNK1E-204ENST00000403904 ZRANB3Q5FWF4 1079 aa33.08■■■□□ 2.89
CSNK1E-204ENST00000403904 PTAR1Q7Z6K3 402 aaPredicted RBP33.08■■■□□ 2.89
CSNK1E-204ENST00000403904 MYRIPQ8NFW9 859 aa33.08■■■□□ 2.89
CSNK1E-204ENST00000403904 OR4L1Q8NH43 312 aa33.08■■■□□ 2.89
CSNK1E-204ENST00000403904 LRRC4CQ9HCJ2 640 aa33.08■■■□□ 2.89
CSNK1E-204ENST00000403904 AASDHPPTQ9NRN7 309 aa33.08■■■□□ 2.89
CSNK1E-204ENST00000403904 HS3ST3A1Q9Y663 406 aa33.08■■■□□ 2.89
CSNK1E-204ENST00000403904 NFATC2Q13469 925 aa33.07■■■□□ 2.88
CSNK1E-204ENST00000403904 SLMAPQ14BN4 828 aa33.07■■■□□ 2.88
CSNK1E-204ENST00000403904 LONRF1Q17RB8 773 aa33.07■■■□□ 2.88
CSNK1E-204ENST00000403904 AFTPHQ6ULP2 937 aa33.07■■■□□ 2.88
CSNK1E-204ENST00000403904 C1orf216Q8TAB5 229 aa33.07■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms