RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 HIC2Q96JB3 615 aa6.9□□□□□ -1.3
CEACAM1-208ENST00000403461 CCDC114Q96M63 670 aa6.9□□□□□ -1.3
CEACAM1-208ENST00000403461 PRICKLE1Q96MT3 831 aaPredicted RBP6.9□□□□□ -1.3
CEACAM1-208ENST00000403461 EBF2Q9HAK2 575 aa6.9□□□□□ -1.3
CEACAM1-208ENST00000403461 CPNE5Q9HCH3 593 aa6.9□□□□□ -1.3
CEACAM1-208ENST00000403461 PREBQ9HCU5 417 aa6.9□□□□□ -1.3
CEACAM1-208ENST00000403461 DYRK4Q9NR20 520 aa6.9□□□□□ -1.3
CEACAM1-208ENST00000403461 ASH1LQ9NR48 2969 aaKnown RBP6.9□□□□□ -1.3
CEACAM1-208ENST00000403461 KLHL11Q9NVR0 708 aa6.9□□□□□ -1.3
CEACAM1-208ENST00000403461 NCKIPSDQ9NZQ3 722 aa6.9□□□□□ -1.3
CEACAM1-208ENST00000403461 SLC12A6Q9UHW9 1150 aa6.9□□□□□ -1.3
CEACAM1-208ENST00000403461 CYTH4Q9UIA0 394 aa6.9□□□□□ -1.3
CEACAM1-208ENST00000403461 SLC25A13Q9UJS0 675 aa6.9□□□□□ -1.3
CEACAM1-208ENST00000403461 PCDHA7Q9UN72 937 aa6.9□□□□□ -1.3
CEACAM1-208ENST00000403461 PCDHB1Q9Y5F3 818 aa6.9□□□□□ -1.3
CEACAM1-208ENST00000403461 PTPRDP23468 1912 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 LOC400499M0QZD8 3231 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 ASXL3Q9C0F0 2248 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 SETXQ7Z333 2677 aaKnown RBP6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 ALG1L2C9J202 215 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 M0QYV0 167 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 TULP2O00295 520 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 O00370 1275 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 TRIM38O00635 465 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 ALOX15BO15296 676 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 RTN2O75298 545 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 PAEPP09466 180 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 SLC2A3P11169 496 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 CKMT1AP12532 417 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 DGKAP23743 735 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 RGS7P49802 495 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 MTA1Q13330 715 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 TOP3AQ13472 1001 aaPredicted RBP6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 NADSYN1Q6IA69 706 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 NEK5Q6P3R8 708 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 LCLAT1Q6UWP7 414 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 MMS22LQ6ZRQ5 1243 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 CXorf67Q86X51 503 aaPredicted RBP6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 CFAP52Q8N1V2 620 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 KLHL36Q8N4N3 616 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 SEMA4DQ92854 862 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 FAM149B1Q96BN6 582 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 MED8Q96G25 268 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 AJUBAQ96IF1 538 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 LCORQ96JN0 433 aaPredicted RBP6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 LMLNQ96KR4 655 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 HSFY1Q96LI6 401 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 TSG101Q99816 390 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 CALN1Q9BXU9 219 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 BARX1Q9HBU1 254 aaPredicted RBP6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 NLGN3Q9NZ94 848 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 KCMF1Q9P0J7 381 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 SLCO3A1Q9UIG8 710 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 INTS6Q9UL03 887 aaKnown RBP6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 ANAPC1Q9H1A4 1944 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 PI4KAP42356 2102 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 ZNF462Q96JM2 2506 aa6.89□□□□□ -1.31
CEACAM1-208ENST00000403461 A0A0G2JNJ9 132 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 A0A1B0GVM2 712 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 MROH6A6NGR9 719 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 TRIM13O60858 407 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 PRKD3O94806 890 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 RHOBTB3O94955 611 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 CENPBP07199 599 aaPredicted RBP6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 PFKFB1P16118 471 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 PDGFRAP16234 1089 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 TACR2P21452 398 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 DRD3P35462 400 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 ADCY8P40145 1251 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 SYKP43405 635 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 HNRNPKP61978 463 aaKnown RBP eCLIP6.88□□□□□ -1.317e-9■□□□□ 10.5
CEACAM1-208ENST00000403461 POM121L1PQ3SYA9 428 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 DCAF6Q58WW2 860 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 FSCBQ5H9T9 825 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 C3orf38Q5JPI3 329 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 RAP1GAP2Q684P5 730 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 TMEM200BQ69YZ2 307 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 TMEM270Q6UE05 265 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 RBM44Q6ZP01 1051 aaKnown RBP6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 REXO1L1PQ8IX06 675 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 ARL14Q8N4G2 192 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 ATP6V0D2Q8N8Y2 350 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 DQX1Q8TE96 717 aaKnown RBP6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 COG1Q8WTW3 980 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 SNRNP27Q8WVK2 155 aaKnown RBP6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 VCPIP1Q96JH7 1222 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 BTN2A3PQ96KV6 586 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 RPL10LQ96L21 214 aaKnown RBP6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 MED15Q96RN5 788 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 MIS12Q9H081 205 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 Q9UFV3 132 aa6.88□□□□□ -1.31
CEACAM1-208ENST00000403461 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.87□□□□□ -1.31
CEACAM1-208ENST00000403461 A6NNZ2 444 aa6.87□□□□□ -1.31
CEACAM1-208ENST00000403461 C10orf142B7Z368 130 aa6.87□□□□□ -1.31
CEACAM1-208ENST00000403461 KPNA3O00505 521 aaPredicted RBP6.87□□□□□ -1.31
CEACAM1-208ENST00000403461 MCF2LO15068 1137 aa6.87□□□□□ -1.31
CEACAM1-208ENST00000403461 SLC16A3O15427 465 aaKnown RBP6.87□□□□□ -1.31
CEACAM1-208ENST00000403461 SLC31A1O15431 190 aa6.87□□□□□ -1.31
CEACAM1-208ENST00000403461 NOBOXO60393 691 aa6.87□□□□□ -1.31
CEACAM1-208ENST00000403461 TCEA3O75764 348 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms