RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 PALMO75781 387 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 GFPT2O94808 682 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 FGFR1OPO95684 399 aaKnown RBP11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 KRT3P12035 628 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 TEAD1P28347 426 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 NDST2P52849 883 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 PMS2P54278 862 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 GSCP56915 257 aaPredicted RBP11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 CDR2Q01850 454 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 NSUN2Q08J23 767 aaKnown RBP eCLIP11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 SLC10A7Q0GE19 358 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 TRAF2Q12933 501 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 BIRC2Q13490 618 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 MAP7Q14244 749 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 MAN2A1Q16706 1144 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 EIF2S3LQ2VIR3 472 aaKnown RBP11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 VWA3BQ502W6 1294 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 PPP1R15BQ5SWA1 713 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 CPZQ66K79 652 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 RAET1GQ6H3X3 334 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 ARFGAP1Q8N6T3 406 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 Q8NA96 180 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 SCAMP4Q969E2 229 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 PEBP4Q96S96 227 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 ZPBPQ9BS86 351 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 STK33Q9BYT3 514 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 ABCG8Q9H221 673 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 RCOR3Q9P2K3 495 aaPredicted RBP11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 CNOT6Q9ULM6 557 aaKnown RBP11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 VPS4AQ9UN37 437 aa11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 OAS3Q9Y6K5 1087 aaKnown RBP11.81□□□□□ -0.52
SPTLC1P3-201ENST00000403408 CNTRLQ7Z7A1 2325 aa11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 WIPF3A6NGB9 483 aa11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 TCP11X1B4DZS4 312 aa11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 ZW10O43264 779 aa11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 DNAJC6O75061 913 aa11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 RFPL1O75677 317 aa11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 TIAF1O95411 115 aa11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 ERCC5P28715 1186 aaPredicted RBP11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 CHAF1BQ13112 559 aa11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 LAMB3Q13751 1172 aa11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 IYDQ6PHW0 289 aa11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 ADAMTSL4Q6UY14 1074 aa11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 CYP4V2Q6ZWL3 525 aaPredicted RBP11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 TICAM1Q8IUC6 712 aa11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 FAM114A1Q8IWE2 563 aa11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 ESX1Q8N693 406 aa11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 MSANTD4Q8NCY6 345 aa11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 OR10G6Q8NH81 332 aa11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 AHCYL2Q96HN2 611 aaKnown RBP11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 COX14Q96I36 57 aa11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 PSKH2Q96QS6 385 aa11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 MCCC1Q96RQ3 725 aaPredicted RBP11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 KCTD15Q96SI1 283 aaPredicted RBP11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 CINPQ9BW66 212 aaPredicted RBP11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 ULBP3Q9BZM4 244 aa11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 TRIT1Q9H3H1 467 aaKnown RBP11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 CATSPERBQ9H7T0 1116 aa11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 NOD2Q9HC29 1040 aa11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 MLXIPLQ9NP71 852 aa11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 LUZP4Q9P127 313 aa11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 SRPK3Q9UPE1 567 aa11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 POLHQ9Y253 713 aa11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 PCSK5Q92824 1860 aa11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 MN1Q10571 1320 aaPredicted RBP11.8□□□□□ -0.52
SPTLC1P3-201ENST00000403408 GOLGA6CA6NDK9 693 aa11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 GOLGA6BA6NDN3 693 aa11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 SIGLEC16A6NMB1 481 aa11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 FGF10O15520 208 aaPredicted RBP11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 KATNA1O75449 491 aa11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 KIAA0754O94854 1291 aa11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 PDHA1P08559 390 aa11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 GOLGA6DP0CG33 693 aa11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 CTPS1P17812 591 aa11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 MAPK9P45984 424 aa11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 ZNF143P52747 638 aaPredicted RBP11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 POLR2LP62875 67 aaKnown RBP11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 HHEXQ03014 270 aa11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 PTSQ03393 145 aa11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 DPTQ07507 201 aa11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 SEMA5AQ13591 1074 aa11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 C6orf15Q6UXA7 325 aaPredicted RBP11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 MON1BQ7L1V2 547 aa11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 APLFQ8IW19 511 aaPredicted RBP11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 PIH1D2Q8WWB5 315 aa11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 ELMO2Q96JJ3 720 aa11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 WDR24Q96S15 920 aa11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 VPS16Q9H269 839 aa11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 SARS2Q9NP81 518 aaKnown RBP11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 CASS4Q9NQ75 786 aa11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 GOLGA6AQ9NYA3 693 aa11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 ADAM22Q9P0K1 906 aa11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 SCHIP1Q9P0W5 487 aaPredicted RBP11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 KIAA1468Q9P260 1216 aa11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 ERRFI1Q9UJM3 462 aaPredicted RBP11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 SLC30A1Q9Y6M5 507 aa11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 SVILO95425 2214 aa11.79□□□□□ -0.52
SPTLC1P3-201ENST00000403408 CROCCQ5TZA2 2017 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 ARHGAP42A6NI28 874 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 DFFAO00273 331 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms