RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 FAM219BQ5XKK7 198 aa19.77■□□□□ 0.76
CCDC47-202ENST00000403162 UBE2Q1Q7Z7E8 422 aa19.77■□□□□ 0.76
CCDC47-202ENST00000403162 CLVS1Q8IUQ0 354 aaPredicted RBP19.77■□□□□ 0.76
CCDC47-202ENST00000403162 RTL3Q8N8U3 475 aaKnown RBP19.77■□□□□ 0.76
CCDC47-202ENST00000403162 IMP4Q96G21 291 aaKnown RBP19.77■□□□□ 0.76
CCDC47-202ENST00000403162 CENPNQ96H22 339 aaPredicted RBP19.77■□□□□ 0.76
CCDC47-202ENST00000403162 MYRFLQ96LU7 910 aa19.77■□□□□ 0.76
CCDC47-202ENST00000403162 CYP2S1Q96SQ9 504 aa19.77■□□□□ 0.76
CCDC47-202ENST00000403162 CD320Q9NPF0 282 aa19.77■□□□□ 0.76
CCDC47-202ENST00000403162 HEMK1Q9Y5R4 338 aaPredicted RBP19.77■□□□□ 0.76
CCDC47-202ENST00000403162 SCN5AQ14524 2016 aa19.77■□□□□ 0.76
CCDC47-202ENST00000403162 TTC24A2A3L6 582 aaPredicted RBP19.77■□□□□ 0.75
CCDC47-202ENST00000403162 ANGPT2O15123 496 aa19.77■□□□□ 0.75
CCDC47-202ENST00000403162 BDNFP23560 247 aa19.77■□□□□ 0.75
CCDC47-202ENST00000403162 CCT8P50990 548 aa19.77■□□□□ 0.75
CCDC47-202ENST00000403162 SH3BP2P78314 561 aa19.77■□□□□ 0.75
CCDC47-202ENST00000403162 ILF2Q12905 390 aaKnown RBP19.77■□□□□ 0.75
CCDC47-202ENST00000403162 TMED1Q13445 227 aa19.77■□□□□ 0.75
CCDC47-202ENST00000403162 FAM171BQ6P995 826 aa19.77■□□□□ 0.75
CCDC47-202ENST00000403162 SPRED1Q7Z699 444 aa19.77■□□□□ 0.75
CCDC47-202ENST00000403162 SPPL2CQ8IUH8 684 aa19.77■□□□□ 0.75
CCDC47-202ENST00000403162 PHYKPLQ8IUZ5 450 aa19.77■□□□□ 0.75
CCDC47-202ENST00000403162 PTERQ96BW5 349 aa19.77■□□□□ 0.75
CCDC47-202ENST00000403162 RTP3Q9BQQ7 232 aa19.77■□□□□ 0.75
CCDC47-202ENST00000403162 GID8Q9NWU2 228 aa19.77■□□□□ 0.75
CCDC47-202ENST00000403162 FNIP2Q9P278 1114 aa19.77■□□□□ 0.75
CCDC47-202ENST00000403162 EBF1Q9UH73 591 aa19.77■□□□□ 0.75
CCDC47-202ENST00000403162 SFMBT1Q9UHJ3 866 aa19.77■□□□□ 0.75
CCDC47-202ENST00000403162 FAF1Q9UNN5 650 aaPredicted RBP19.77■□□□□ 0.75
CCDC47-202ENST00000403162 PATJQ8NI35 1801 aa19.76■□□□□ 0.75
CCDC47-202ENST00000403162 TRIM43BA6NCK2 446 aa19.76■□□□□ 0.75
CCDC47-202ENST00000403162 MROH6A6NGR9 719 aa19.76■□□□□ 0.75
CCDC47-202ENST00000403162 ARL5CA6NH57 179 aa19.76■□□□□ 0.75
CCDC47-202ENST00000403162 CDK14O94921 469 aa19.76■□□□□ 0.75
CCDC47-202ENST00000403162 RASAL1O95294 804 aa19.76■□□□□ 0.75
CCDC47-202ENST00000403162 CXCL10P02778 98 aa19.76■□□□□ 0.75
CCDC47-202ENST00000403162 THP07101 528 aa19.76■□□□□ 0.75
CCDC47-202ENST00000403162 RPL10P27635 214 aaKnown RBP19.76■□□□□ 0.75
CCDC47-202ENST00000403162 TCTN1Q2MV58 587 aa19.76■□□□□ 0.75
CCDC47-202ENST00000403162 VPS26BQ4G0F5 336 aa19.76■□□□□ 0.75
CCDC47-202ENST00000403162 ADGRG5Q8IZF4 528 aa19.76■□□□□ 0.75
CCDC47-202ENST00000403162 TRIM43Q96BQ3 446 aaPredicted RBP19.76■□□□□ 0.75
CCDC47-202ENST00000403162 C12orf43Q96C57 262 aaKnown RBP19.76■□□□□ 0.75
CCDC47-202ENST00000403162 MUC13Q9H3R2 512 aa19.76■□□□□ 0.75
CCDC47-202ENST00000403162 SMOC2Q9H3U7 446 aa19.76■□□□□ 0.75
CCDC47-202ENST00000403162 POLR3BQ9NW08 1133 aaPredicted RBP19.76■□□□□ 0.75
CCDC47-202ENST00000403162 CMTM6Q9NX76 183 aa19.76■□□□□ 0.75
CCDC47-202ENST00000403162 PEX11BO96011 259 aa19.76■□□□□ 0.75
CCDC47-202ENST00000403162 GPIP06744 558 aa19.76■□□□□ 0.75
CCDC47-202ENST00000403162 SLC6A2P23975 617 aa19.76■□□□□ 0.75
CCDC47-202ENST00000403162 AFF1P51825 1210 aaKnown RBP19.76■□□□□ 0.75
CCDC47-202ENST00000403162 ZNF598Q86UK7 904 aaKnown RBP19.76■□□□□ 0.75
CCDC47-202ENST00000403162 TWIST2Q8WVJ9 160 aa19.76■□□□□ 0.75
CCDC47-202ENST00000403162 IL1RL2Q9HB29 575 aa19.76■□□□□ 0.75
CCDC47-202ENST00000403162 SDR39U1Q9NRG7 319 aaPredicted RBP19.76■□□□□ 0.75
CCDC47-202ENST00000403162 ABCC13Q9NSE7 274 aa19.76■□□□□ 0.75
CCDC47-202ENST00000403162 TBCCD1Q9NVR7 557 aa19.76■□□□□ 0.75
CCDC47-202ENST00000403162 SH3PXD2BA1X283 911 aa19.75■□□□□ 0.75
CCDC47-202ENST00000403162 DYTNA2CJ06 578 aa19.75■□□□□ 0.75
CCDC47-202ENST00000403162 WASH4PA8MWX3 477 aa19.75■□□□□ 0.75
CCDC47-202ENST00000403162 E9PAM4 449 aa19.75■□□□□ 0.75
CCDC47-202ENST00000403162 ENPP3O14638 875 aa19.75■□□□□ 0.75
CCDC47-202ENST00000403162 PIP5K1BO14986 540 aa19.75■□□□□ 0.75
CCDC47-202ENST00000403162 ARPC2O15144 300 aa19.75■□□□□ 0.75
CCDC47-202ENST00000403162 TIMP1P01033 207 aa19.75■□□□□ 0.75
CCDC47-202ENST00000403162 FCGR1AP12314 374 aa19.75■□□□□ 0.75
CCDC47-202ENST00000403162 CD1DP15813 335 aa19.75■□□□□ 0.75
CCDC47-202ENST00000403162 UGT1A6P19224 532 aa19.75■□□□□ 0.75
CCDC47-202ENST00000403162 TTKP33981 857 aa19.75■□□□□ 0.75
CCDC47-202ENST00000403162 STT3AP46977 705 aa19.75■□□□□ 0.75
CCDC47-202ENST00000403162 CTBSQ01459 385 aa19.75■□□□□ 0.75
CCDC47-202ENST00000403162 NRG1Q02297 640 aaPredicted RBP19.75■□□□□ 0.75
CCDC47-202ENST00000403162 TMTC4Q5T4D3 741 aa19.75■□□□□ 0.75
CCDC47-202ENST00000403162 KANK2Q63ZY3 851 aa19.75■□□□□ 0.75
CCDC47-202ENST00000403162 PIM3Q86V86 326 aa19.75■□□□□ 0.75
CCDC47-202ENST00000403162 COLGALT2Q8IYK4 626 aa19.75■□□□□ 0.75
CCDC47-202ENST00000403162 CMTR2Q8IYT2 770 aaKnown RBP19.75■□□□□ 0.75
CCDC47-202ENST00000403162 TRPV3Q8NET8 790 aa19.75■□□□□ 0.75
CCDC47-202ENST00000403162 ZNF420Q8TAQ5 688 aaPredicted RBP19.75■□□□□ 0.75
CCDC47-202ENST00000403162 FATE1Q969F0 183 aa19.75■□□□□ 0.75
CCDC47-202ENST00000403162 HSPBAP1Q96EW2 488 aa19.75■□□□□ 0.75
CCDC47-202ENST00000403162 DOK1Q99704 481 aa19.75■□□□□ 0.75
CCDC47-202ENST00000403162 NPLQ9BXD5 320 aaPredicted RBP19.75■□□□□ 0.75
CCDC47-202ENST00000403162 EGFL7Q9UHF1 273 aa19.75■□□□□ 0.75
CCDC47-202ENST00000403162 RNF103-CHMP3A0A140T963 221 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 AZIN1O14977 448 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 KIAA0355O15063 1070 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 ACOX3O15254 700 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 EOMESO95936 686 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 GFAPP14136 432 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 FDXRP22570 491 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 ITGB8P26012 769 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 SCNN1GP51170 649 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 CDH13P55290 713 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 FAM189BP81408 668 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 PNPLA1Q8N8W4 532 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 OR6P1Q8NGX9 317 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 ABTB1Q969K4 478 aaPredicted RBP19.74■□□□□ 0.75
CCDC47-202ENST00000403162 LRRC58Q96CX6 371 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 ACBD6Q9BR61 282 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms