RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 CTC1Q2NKJ3 1217 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 SETMARQ53H47 684 aaPredicted RBP25.51■■□□□ 1.67
CPNE1-205ENST00000401607 AGAP9Q5VTM2 703 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 BRAT1Q6PJG6 821 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 PARM1Q6UWI2 310 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 TAS2R42Q7RTR8 314 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 MRPL57Q9BQC6 102 aaKnown RBP25.51■■□□□ 1.67
CPNE1-205ENST00000401607 PLCD4Q9BRC7 762 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 GTSE1Q9NYZ3 720 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 B4GALT6Q9UBX8 382 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 IL36AQ9UHA7 158 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 DENND4AQ7Z401 1863 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 TRIM13O60858 407 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 CHRM1P11229 460 aaPredicted RBP25.51■■□□□ 1.67
CPNE1-205ENST00000401607 SLC1A6P48664 564 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 EIF4HQ15056 248 aaKnown RBP25.51■■□□□ 1.67
CPNE1-205ENST00000401607 CTSL3PQ5NE16 218 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 NAPRTQ6XQN6 538 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 TRPM8Q7Z2W7 1104 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 TERB1Q8NA31 727 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 ZNF398Q8TD17 642 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 FGF14Q92915 247 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 ELSPBP1Q96BH3 223 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 KCNK13Q9HB14 408 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 DCTN4Q9UJW0 460 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 APPL1Q9UKG1 709 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 USH1CQ9Y6N9 552 aa25.51■■□□□ 1.67
CPNE1-205ENST00000401607 PFDN6O15212 129 aa25.5■■□□□ 1.67
CPNE1-205ENST00000401607 RHOBTB1O94844 696 aa25.5■■□□□ 1.67
CPNE1-205ENST00000401607 ZNF37AP17032 561 aaPredicted RBP25.5■■□□□ 1.67
CPNE1-205ENST00000401607 PSMC3P17980 439 aa25.5■■□□□ 1.67
CPNE1-205ENST00000401607 GJA4P35212 333 aa25.5■■□□□ 1.67
CPNE1-205ENST00000401607 SPAM1P38567 509 aa25.5■■□□□ 1.67
CPNE1-205ENST00000401607 POLR2LP62875 67 aaKnown RBP25.5■■□□□ 1.67
CPNE1-205ENST00000401607 PTSQ03393 145 aa25.5■■□□□ 1.67
CPNE1-205ENST00000401607 SNX20Q7Z614 316 aa25.5■■□□□ 1.67
CPNE1-205ENST00000401607 YAF2Q8IY57 180 aa25.5■■□□□ 1.67
CPNE1-205ENST00000401607 GPR26Q8NDV2 337 aa25.5■■□□□ 1.67
CPNE1-205ENST00000401607 FAM136AQ96C01 138 aa25.5■■□□□ 1.67
CPNE1-205ENST00000401607 CHFRQ96EP1 664 aa25.5■■□□□ 1.67
CPNE1-205ENST00000401607 OSBPL1AQ9BXW6 950 aa25.5■■□□□ 1.67
CPNE1-205ENST00000401607 CCDC68Q9H2F9 335 aa25.5■■□□□ 1.67
CPNE1-205ENST00000401607 PLA2G4CQ9UP65 541 aa25.5■■□□□ 1.67
CPNE1-205ENST00000401607 TRBV5-4A0A0C4DH59 114 aa25.49■■□□□ 1.67
CPNE1-205ENST00000401607 GLYATL1P3A0A0U1RQE8 302 aa25.49■■□□□ 1.67
CPNE1-205ENST00000401607 C1SP09871 688 aa25.49■■□□□ 1.67
CPNE1-205ENST00000401607 PKMP14618 531 aaKnown RBP25.49■■□□□ 1.67
CPNE1-205ENST00000401607 PTGER3P43115 390 aa25.49■■□□□ 1.67
CPNE1-205ENST00000401607 ADARP55265 1226 aaKnown RBP25.49■■□□□ 1.67
CPNE1-205ENST00000401607 NFATC2Q13469 925 aa25.49■■□□□ 1.67
CPNE1-205ENST00000401607 CRLF3Q8IUI8 442 aa25.49■■□□□ 1.67
CPNE1-205ENST00000401607 LRIG1Q96JA1 1093 aa25.49■■□□□ 1.67
CPNE1-205ENST00000401607 SORT1Q99523 831 aa25.49■■□□□ 1.67
CPNE1-205ENST00000401607 P2RY12Q9H244 342 aa25.49■■□□□ 1.67
CPNE1-205ENST00000401607 POMKQ9H5K3 350 aa25.49■■□□□ 1.67
CPNE1-205ENST00000401607 ASB8Q9H765 288 aa25.49■■□□□ 1.67
CPNE1-205ENST00000401607 CLDND1Q9NY35 253 aa25.49■■□□□ 1.67
CPNE1-205ENST00000401607 LMCD1Q9NZU5 365 aa25.49■■□□□ 1.67
CPNE1-205ENST00000401607 DLX3O60479 287 aa25.49■■□□□ 1.67
CPNE1-205ENST00000401607 LTBRP36941 435 aa25.49■■□□□ 1.67
CPNE1-205ENST00000401607 PDAP1Q13442 181 aaKnown RBP25.49■■□□□ 1.67
CPNE1-205ENST00000401607 ACAP2Q15057 778 aa25.49■■□□□ 1.67
CPNE1-205ENST00000401607 CHRNA6Q15825 494 aa25.49■■□□□ 1.67
CPNE1-205ENST00000401607 LIPMQ5VYY2 423 aa25.49■■□□□ 1.67
CPNE1-205ENST00000401607 CERS6Q6ZMG9 384 aa25.49■■□□□ 1.67
CPNE1-205ENST00000401607 KDM1BQ8NB78 822 aa25.49■■□□□ 1.67
CPNE1-205ENST00000401607 TBRG4Q969Z0 631 aaKnown RBP eCLIP25.49■■□□□ 1.672e-6■■■■■ 26.8
CPNE1-205ENST00000401607 RIPOR3Q96MK2 946 aa25.49■■□□□ 1.67
CPNE1-205ENST00000401607 RPP25Q9BUL9 199 aaKnown RBP25.49■■□□□ 1.67
CPNE1-205ENST00000401607 GATA5Q9BWX5 397 aaPredicted RBP25.49■■□□□ 1.67
CPNE1-205ENST00000401607 TAS2R13Q9NYV9 303 aa25.49■■□□□ 1.67
CPNE1-205ENST00000401607 FAM50BQ9Y247 325 aa25.49■■□□□ 1.67
CPNE1-205ENST00000401607 ANKRD65E5RJM6 399 aa25.48■■□□□ 1.67
CPNE1-205ENST00000401607 KIAA0754O94854 1291 aa25.48■■□□□ 1.67
CPNE1-205ENST00000401607 TIMP2P16035 220 aa25.48■■□□□ 1.67
CPNE1-205ENST00000401607 ITGALP20701 1170 aa25.48■■□□□ 1.67
CPNE1-205ENST00000401607 PTPN5P54829 565 aa25.48■■□□□ 1.67
CPNE1-205ENST00000401607 ABCE1P61221 599 aaKnown RBP25.48■■□□□ 1.67
CPNE1-205ENST00000401607 SPRED3Q2MJR0 410 aa25.48■■□□□ 1.67
CPNE1-205ENST00000401607 FNDC3BQ53EP0 1204 aaKnown RBP25.48■■□□□ 1.67
CPNE1-205ENST00000401607 KLC3Q6P597 504 aa25.48■■□□□ 1.67
CPNE1-205ENST00000401607 RFLNAQ6ZTI6 216 aa25.48■■□□□ 1.67
CPNE1-205ENST00000401607 CCDC121Q6ZUS5 278 aa25.48■■□□□ 1.67
CPNE1-205ENST00000401607 SERPINA9Q86WD7 417 aa25.48■■□□□ 1.67
CPNE1-205ENST00000401607 STK40Q8N2I9 435 aa25.48■■□□□ 1.67
CPNE1-205ENST00000401607 CCDC97Q96F63 343 aaPredicted RBP25.48■■□□□ 1.67
CPNE1-205ENST00000401607 PRO3102Q9H379 93 aa25.48■■□□□ 1.67
CPNE1-205ENST00000401607 GALPQ9UBC7 116 aa25.48■■□□□ 1.67
CPNE1-205ENST00000401607 OAS3Q9Y6K5 1087 aaKnown RBP25.48■■□□□ 1.67
CPNE1-205ENST00000401607 UPK3BL1B0FP48 263 aa25.47■■□□□ 1.67
CPNE1-205ENST00000401607 UPK3BL2E5RIL1 263 aa25.47■■□□□ 1.67
CPNE1-205ENST00000401607 NIPSNAP2O75323 286 aa25.47■■□□□ 1.67
CPNE1-205ENST00000401607 HLA-EP13747 358 aa25.47■■□□□ 1.67
CPNE1-205ENST00000401607 CD1DP15813 335 aa25.47■■□□□ 1.67
CPNE1-205ENST00000401607 PFKPQ01813 784 aa25.47■■□□□ 1.67
CPNE1-205ENST00000401607 ZNF805Q5CZA5 627 aa25.47■■□□□ 1.67
CPNE1-205ENST00000401607 EP400NLQ6ZTU2 488 aa25.47■■□□□ 1.67
CPNE1-205ENST00000401607 SREK1Q8WXA9 508 aaKnown RBP25.47■■□□□ 1.67
CPNE1-205ENST00000401607 PBXIP1Q96AQ6 731 aa25.47■■□□□ 1.67
CPNE1-205ENST00000401607 SGF29Q96ES7 293 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms