RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 SEZ6LQ9BYH1 1024 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 ADNPQ9H2P0 1102 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 VPS45Q9NRW7 570 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 OCM2P0CE71 109 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 OCMP0CE72 109 aaPredicted RBP20.91■□□□□ 0.94
CTCF-202ENST00000401394 FSHRP23945 695 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 RPS9P46781 194 aaKnown RBP20.91■□□□□ 0.94
CTCF-202ENST00000401394 GALNT3Q14435 633 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 ZNF792Q3KQV3 632 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 TIGD5Q53EQ6 642 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 SLC2A7Q6PXP3 512 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 CLYBLQ8N0X4 340 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 TOP6BLQ8N6T0 577 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 TMEM125Q96AQ2 219 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 DUS3LQ96G46 650 aaKnown RBP20.91■□□□□ 0.94
CTCF-202ENST00000401394 BLOC1S6Q9UL45 172 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 FUOMA2VDF0 154 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 NOBOXO60393 691 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 IL12AP29459 219 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 LEPRP48357 1165 aaKnown RBP20.91■□□□□ 0.94
CTCF-202ENST00000401394 MTPNP58546 118 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 FPGSQ05932 587 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 RAB41Q5JT25 222 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 DGCR6LQ9BY27 220 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 AZIN1O14977 448 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 SYNCRIPO60506 623 aaKnown RBP20.9■□□□□ 0.94
CTCF-202ENST00000401394 HRH2P25021 359 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 ATP6V0D1P61421 351 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 HERVK_113P63132 956 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 RELAQ04206 551 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 PSMD5Q16401 504 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 TRPV3Q8NET8 790 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 SNX19Q92543 992 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 PPM1MQ96MI6 270 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 ERVK-6Q9BXR3 956 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 SMURF2Q9HAU4 748 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 SLC52A3Q9NQ40 469 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 SMPD3Q9NY59 655 aaPredicted RBP20.9■□□□□ 0.94
CTCF-202ENST00000401394 ABCD2Q9UBJ2 740 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 PCDHA9Q9Y5H5 950 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 ST14Q9Y5Y6 855 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 CLASP2O75122 1294 aaKnown RBP20.9■□□□□ 0.94
CTCF-202ENST00000401394 RASAL1O95294 804 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 RBP1P09455 135 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 CTSHP09668 335 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 KCNE1P15382 129 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 CD1DP15813 335 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 PAMP19021 973 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 PNPLA4P41247 253 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 CDKN1CP49918 316 aaPredicted RBP20.9■□□□□ 0.94
CTCF-202ENST00000401394 SCNN1GP51170 649 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 INPP5AQ14642 412 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 ALFQ53S48 1182 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 KDELC1Q6UW63 502 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 ABRAXAS1Q6UWZ7 409 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 ALDH16A1Q8IZ83 802 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 OR2T11Q8NH01 316 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 PSMG2Q969U7 264 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 KCTD14Q9BQ13 255 aaPredicted RBP20.9■□□□□ 0.94
CTCF-202ENST00000401394 CHID1Q9BWS9 393 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 LHPPQ9H008 270 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 CARS2Q9HA77 564 aaKnown RBP20.9■□□□□ 0.94
CTCF-202ENST00000401394 NMUR1Q9HB89 426 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 HTTP42858 3142 aa20.9■□□□□ 0.94
CTCF-202ENST00000401394 INHBBP09529 407 aa20.89■□□□□ 0.94
CTCF-202ENST00000401394 MAP4P27816 1152 aaKnown RBP20.89■□□□□ 0.94
CTCF-202ENST00000401394 EEF1DP29692 281 aaKnown RBP20.89■□□□□ 0.94
CTCF-202ENST00000401394 ALDH4A1P30038 563 aa20.89■□□□□ 0.94
CTCF-202ENST00000401394 RFC2P35250 354 aa20.89■□□□□ 0.94
CTCF-202ENST00000401394 GEMP55040 296 aa20.89■□□□□ 0.94
CTCF-202ENST00000401394 NFATC3Q12968 1075 aa20.89■□□□□ 0.94
CTCF-202ENST00000401394 ABI1Q8IZP0 508 aa20.89■□□□□ 0.94
CTCF-202ENST00000401394 NLGN2Q8NFZ4 835 aa20.89■□□□□ 0.94
CTCF-202ENST00000401394 SEPT8Q92599 483 aa20.89■□□□□ 0.94
CTCF-202ENST00000401394 BIRC7Q96CA5 298 aa20.89■□□□□ 0.94
CTCF-202ENST00000401394 HMCESQ96FZ2 354 aa20.89■□□□□ 0.94
CTCF-202ENST00000401394 ENTPD7Q9NQZ7 604 aa20.89■□□□□ 0.94
CTCF-202ENST00000401394 OSER1Q9NX31 292 aa20.89■□□□□ 0.94
CTCF-202ENST00000401394 ZNF225Q9UK10 706 aa20.89■□□□□ 0.94
CTCF-202ENST00000401394 TCRBV5S2A0A599 114 aa20.89■□□□□ 0.93
CTCF-202ENST00000401394 CDC7O00311 574 aa20.89■□□□□ 0.93
CTCF-202ENST00000401394 GPR39O43194 453 aa20.89■□□□□ 0.93
CTCF-202ENST00000401394 ITGB1P05556 798 aa20.89■□□□□ 0.93
CTCF-202ENST00000401394 HMOX2P30519 316 aa20.89■□□□□ 0.93
CTCF-202ENST00000401394 CAPGP40121 348 aa20.89■□□□□ 0.93
CTCF-202ENST00000401394 SERPINH1P50454 418 aaKnown RBP20.89■□□□□ 0.93
CTCF-202ENST00000401394 C18orf21Q32NC0 220 aaPredicted RBP20.89■□□□□ 0.93
CTCF-202ENST00000401394 PERM1Q5SV97 790 aa20.89■□□□□ 0.93
CTCF-202ENST00000401394 INTS11Q5TA45 600 aaKnown RBP20.89■□□□□ 0.93
CTCF-202ENST00000401394 DPP9Q86TI2 863 aa20.89■□□□□ 0.93
CTCF-202ENST00000401394 AFAP1L2Q8N4X5 818 aa20.89■□□□□ 0.93
CTCF-202ENST00000401394 ZBTB8BQ8NAP8 495 aaPredicted RBP20.89■□□□□ 0.93
CTCF-202ENST00000401394 TSGA13Q96PP4 275 aa20.89■□□□□ 0.93
CTCF-202ENST00000401394 MRPL40Q9NQ50 206 aaKnown RBP20.89■□□□□ 0.93
CTCF-202ENST00000401394 TBC1D23Q9NUY8 699 aa20.89■□□□□ 0.93
CTCF-202ENST00000401394 ACTR3BQ9P1U1 418 aa20.89■□□□□ 0.93
CTCF-202ENST00000401394 UXTQ9UBK9 157 aaPredicted RBP20.89■□□□□ 0.93
CTCF-202ENST00000401394 UBA6A0AVT1 1052 aaPredicted RBP20.88■□□□□ 0.93
CTCF-202ENST00000401394 TBX18O95935 607 aa20.88■□□□□ 0.93
CTCF-202ENST00000401394 C1RP00736 705 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms