RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 N6AMT1Q9Y5N5 214 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 NFKBIEO00221 500 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 CACNB4O00305 520 aaPredicted RBP18.13■□□□□ 0.49
COL18A1-204ENST00000400337 CACNG1Q06432 222 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 TRIM40Q6P9F5 258 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 ZBTB2Q8N680 514 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 DCBLD1Q8N8Z6 715 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 PPCDCQ96CD2 204 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 OXCT2Q9BYC2 517 aaPredicted RBP18.13■□□□□ 0.49
COL18A1-204ENST00000400337 TLE6Q9H808 572 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 SGK2Q9HBY8 427 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 PEAK1Q9H792 1746 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 SNAP91O60641 907 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 DNTTP04053 509 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 SP2Q02086 613 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 COX10Q12887 443 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 ASTE1Q2TB18 679 aaPredicted RBP18.13■□□□□ 0.49
COL18A1-204ENST00000400337 AAGABQ6PD74 315 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 HTATIP2Q9BUP3 242 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 MAGEH1Q9H213 219 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 MFSD1Q9H3U5 465 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 SLC27A6Q9Y2P4 619 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 EFCAB10A6NFE3 127 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 URADA6NGE7 173 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 FGF19O95750 216 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 C21orf59P57076 290 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 TRIM71Q2Q1W2 868 aaKnown RBP18.13■□□□□ 0.49
COL18A1-204ENST00000400337 ZDHHC20Q5W0Z9 365 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 DRICH1Q6PGQ1 229 aaPredicted RBP18.13■□□□□ 0.49
COL18A1-204ENST00000400337 CHST9Q7L1S5 443 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 LGALS13Q9UHV8 139 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 OR10H1Q9Y4A9 318 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 PRAMEF1O95521 474 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 RGS1Q08116 209 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 CBX2Q14781 532 aaPredicted RBP18.13■□□□□ 0.49
COL18A1-204ENST00000400337 SLC35G1Q2M3R5 365 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 ANXA8L1Q5VT79 327 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 BROXQ5VW32 411 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 ZNF57Q68EA5 555 aaPredicted RBP18.13■□□□□ 0.49
COL18A1-204ENST00000400337 CLEC6AQ6EIG7 209 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 CAPN13Q6MZZ7 669 aaPredicted RBP18.13■□□□□ 0.49
COL18A1-204ENST00000400337 ZYG11AQ6WRX3 759 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 RBM15BQ8NDT2 890 aaKnown RBP18.13■□□□□ 0.49
COL18A1-204ENST00000400337 SCAMP5Q8TAC9 235 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 AZIN2Q96A70 460 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 FAXDC2Q96IV6 333 aa18.13■□□□□ 0.49
COL18A1-204ENST00000400337 GNPDA1P46926 289 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 PRKCZQ05513 592 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 TIGD5Q53EQ6 642 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 CERS6Q6ZMG9 384 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 OR2T12Q8NG77 320 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 TWIST2Q8WVJ9 160 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 SMG7Q92540 1137 aaKnown RBP18.12■□□□□ 0.49
COL18A1-204ENST00000400337 BBIP1A8MTZ0 92 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 INSIG1O15503 277 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 OR6B1O95007 311 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 MAPKAPK2P49137 400 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 PRSS55Q6UWB4 352 aaPredicted RBP18.12■□□□□ 0.49
COL18A1-204ENST00000400337 HPS6Q86YV9 775 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 ARL14EPQ8N8R7 260 aaPredicted RBP18.12■□□□□ 0.49
COL18A1-204ENST00000400337 ZNF540Q8NDQ6 660 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 FAM13CQ8NE31 585 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 OR4A15Q8NGL6 344 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 MCRS1Q96EZ8 462 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 DNAJC1Q96KC8 554 aaKnown RBP18.12■□□□□ 0.49
COL18A1-204ENST00000400337 HOPXQ9BPY8 73 aaPredicted RBP18.12■□□□□ 0.49
COL18A1-204ENST00000400337 GEMIN8Q9NWZ8 242 aaKnown RBP18.12■□□□□ 0.49
COL18A1-204ENST00000400337 FCF1Q9Y324 198 aaKnown RBP18.12■□□□□ 0.49
COL18A1-204ENST00000400337 H3BM21 787 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 KPNA4O00629 521 aaPredicted RBP18.12■□□□□ 0.49
COL18A1-204ENST00000400337 SIN3BO75182 1162 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 UQCRBP14927 111 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 NDST2P52849 883 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 SPIBQ01892 262 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 FOLH1Q04609 750 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 CCL14Q16627 93 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 TSTD2Q5T7W7 516 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 RNF44Q7L0R7 432 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 SPATA19Q7Z5L4 167 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 CACTIN-AS1Q8N1I8 211 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 DBF4BQ8NFT6 615 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 CLPTM1LQ96KA5 538 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 SPRTNQ9H040 489 aaPredicted RBP18.12■□□□□ 0.49
COL18A1-204ENST00000400337 SNED1Q8TER0 1413 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 ITGA1P56199 1179 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 TIMM50Q3ZCQ8 353 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 GET4Q7L5D6 327 aaPredicted RBP18.12■□□□□ 0.49
COL18A1-204ENST00000400337 C17orf64Q86WR6 236 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 REM2Q8IYK8 340 aaPredicted RBP18.12■□□□□ 0.49
COL18A1-204ENST00000400337 C2orf73Q8N5S3 287 aaPredicted RBP18.12■□□□□ 0.49
COL18A1-204ENST00000400337 CPSF7Q8N684 471 aaKnown RBP18.12■□□□□ 0.49
COL18A1-204ENST00000400337 FITM2Q8N6M3 262 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 OR52L1Q8NGH7 329 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 SLC9A7Q96T83 725 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 ADI1Q9BV57 179 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 NUAK2Q9H093 628 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 SLC9A8Q9Y2E8 581 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 AP4B1Q9Y6B7 739 aa18.12■□□□□ 0.49
COL18A1-204ENST00000400337 PNMA8CA0A1B0GUJ8 204 aa18.11■□□□□ 0.49
COL18A1-204ENST00000400337 CENPXA8MT69 81 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms