RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 KBTBD6Q86V97 674 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 ZC3H7AQ8IWR0 971 aaKnown RBP7.92□□□□□ -1.14
USP47-203ENST00000399455 CYB5D2Q8WUJ1 264 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 ITCHQ96J02 903 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 KLHL5Q96PQ7 755 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 PIH1D1Q9NWS0 290 aaKnown RBP7.92□□□□□ -1.14
USP47-203ENST00000399455 CFL2Q9Y281 166 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 B2RBV5 119 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 PRMT5O14744 637 aaPredicted RBP7.92□□□□□ -1.14
USP47-203ENST00000399455 TPP1O14773 563 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 PRAMEF1O95521 474 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 SNAI1O95863 264 aaPredicted RBP7.92□□□□□ -1.14
USP47-203ENST00000399455 PFKLP17858 780 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 ZNF132P52740 706 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 CREB5Q02930 508 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 TRAF2Q12933 501 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 SGCBQ16585 318 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 ZCCHC9Q8N567 271 aaKnown RBP7.92□□□□□ -1.14
USP47-203ENST00000399455 FAM3CQ92520 227 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 LGMNQ99538 433 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 C17orf62Q9BQA9 187 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 TMEM120AQ9BXJ8 343 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 L1RE1Q9UN81 338 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 SLC28A2O43868 658 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 CYBAP13498 195 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 H2AFXP16104 143 aaPredicted RBP7.92□□□□□ -1.14
USP47-203ENST00000399455 ZNF30P17039 623 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 MAGEA11P43364 429 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 PLK1P53350 603 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 FRG1Q14331 258 aaKnown RBP7.92□□□□□ -1.14
USP47-203ENST00000399455 PTGES3Q15185 160 aaKnown RBP7.92□□□□□ -1.14
USP47-203ENST00000399455 LDLRAD1Q5T700 205 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 ARHGAP40Q5TG30 622 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 MAMDC4Q6UXC1 1216 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 RPTNQ6XPR3 784 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 JAZF1Q86VZ6 243 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 C1orf127Q8N9H9 656 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 OSBPL2Q9H1P3 480 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 CDC42EP4Q9H3Q1 356 aaKnown RBP7.92□□□□□ -1.14
USP47-203ENST00000399455 PRDM12Q9H4Q4 367 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 EBF3Q9H4W6 596 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 TXNRD2Q9NNW7 524 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 NUDT4Q9NZJ9 180 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 MATN3O15232 486 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 ASMTP46597 345 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 LARS2Q15031 903 aaKnown RBP7.92□□□□□ -1.14
USP47-203ENST00000399455 KLHL26Q53HC5 615 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 ULK2Q8IYT8 1036 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 RASGEF1AQ8N9B8 481 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 HDAC10Q969S8 669 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 GFM2Q969S9 779 aaKnown RBP7.92□□□□□ -1.14
USP47-203ENST00000399455 RAB7BQ96AH8 199 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 C19orf60Q96EN9 201 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 SLC38A2Q96QD8 506 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 DPEP3Q9H4B8 488 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 SERINC1Q9NRX5 453 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 THAP1Q9NVV9 213 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 GPR34Q9UPC5 381 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 MTF2Q9Y483 593 aaPredicted RBP7.92□□□□□ -1.14
USP47-203ENST00000399455 OR1F1O43749 312 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 DUX1O43812 170 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 USP12O75317 370 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 KLHL18O94889 574 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 IFNGP01579 166 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 PCSK2P16519 638 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 DRD1P21728 446 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 CSTF1Q05048 431 aaKnown RBP7.92□□□□□ -1.14
USP47-203ENST00000399455 DNAJC3Q13217 504 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 DLK2Q6UY11 383 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 TAC4Q86UU9 113 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 PTGR2Q8N8N7 351 aaPredicted RBP7.92□□□□□ -1.14
USP47-203ENST00000399455 ADAMTS15Q8TE58 950 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 STK32AQ8WU08 396 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 DGAT2Q96PD7 388 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 GAL3ST4Q96RP7 486 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 SUV39H2Q9H5I1 410 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 TCF7L2Q9NQB0 619 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 FNIP2Q9P278 1114 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 FBXW11Q9UKB1 542 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 LAMB4A4D0S4 1761 aa7.92□□□□□ -1.14
USP47-203ENST00000399455 TMCC2O75069 709 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 DEAF1O75398 565 aaPredicted RBP7.91□□□□□ -1.14
USP47-203ENST00000399455 GJB6O95452 261 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 LBPP18428 481 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 CLK1P49759 484 aaKnown RBP7.91□□□□□ -1.14
USP47-203ENST00000399455 RAD23BP54727 409 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 DAOAP59103 153 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 RHBDF2Q6PJF5 856 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 NEK10Q6ZWH5 1172 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 IL22RA1Q8N6P7 574 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 ZNF527Q8NB42 609 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 CAMKVQ8NCB2 501 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 DNAJC19Q96DA6 116 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 B3GALT6Q96L58 329 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 SLC25A51Q9H1U9 297 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 PCDH18Q9HCL0 1135 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 PNO1Q9NRX1 252 aaKnown RBP7.91□□□□□ -1.14
USP47-203ENST00000399455 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.91□□□□□ -1.14
USP47-203ENST00000399455 WNT6Q9Y6F9 365 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 SMIM31A0A1B0GVY4 71 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms