RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 KYQ8NBH2 561 aa13.87□□□□□ -0.19
SEC13-204ENST00000397099 TTC13Q8NBP0 860 aa13.87□□□□□ -0.19
SEC13-204ENST00000397099 COX14Q96I36 57 aa13.87□□□□□ -0.19
SEC13-204ENST00000397099 FCRL5Q96RD9 977 aa13.87□□□□□ -0.19
SEC13-204ENST00000397099 CCDC3Q9BQI4 270 aa13.87□□□□□ -0.19
SEC13-204ENST00000397099 OSBPL8Q9BZF1 889 aa13.87□□□□□ -0.19
SEC13-204ENST00000397099 TSGA10Q9BZW7 698 aa13.87□□□□□ -0.19
SEC13-204ENST00000397099 TMEM168Q9H0V1 697 aa13.87□□□□□ -0.19
SEC13-204ENST00000397099 DPEP2Q9H4A9 486 aa13.87□□□□□ -0.19
SEC13-204ENST00000397099 KLHL8Q9P2G9 620 aaPredicted RBP13.87□□□□□ -0.19
SEC13-204ENST00000397099 SUFUQ9UMX1 484 aa13.87□□□□□ -0.19
SEC13-204ENST00000397099 CELSR3Q9NYQ7 3312 aa13.87□□□□□ -0.19
SEC13-204ENST00000397099 ARHGEF17Q96PE2 2063 aaPredicted RBP13.87□□□□□ -0.19
SEC13-204ENST00000397099 ADAMTS20P59510 1910 aa13.86□□□□□ -0.19
SEC13-204ENST00000397099 RRP8O43159 456 aaKnown RBP13.86□□□□□ -0.19
SEC13-204ENST00000397099 PPFIA2O75334 1257 aa13.86□□□□□ -0.19
SEC13-204ENST00000397099 CSO75390 466 aaKnown RBP13.86□□□□□ -0.19
SEC13-204ENST00000397099 ANXA9O76027 345 aa13.86□□□□□ -0.19
SEC13-204ENST00000397099 DXOO77932 396 aaKnown RBP13.86□□□□□ -0.19
SEC13-204ENST00000397099 SOD1P00441 154 aa13.86□□□□□ -0.19
SEC13-204ENST00000397099 PTMAP06454 111 aaKnown RBP13.86□□□□□ -0.19
SEC13-204ENST00000397099 HOXB3P14651 431 aaPredicted RBP13.86□□□□□ -0.19
SEC13-204ENST00000397099 PECAM1P16284 738 aaPredicted RBP13.86□□□□□ -0.19
SEC13-204ENST00000397099 HLA-DPA1P20036 260 aa13.86□□□□□ -0.19
SEC13-204ENST00000397099 ABCG1P45844 678 aa13.86□□□□□ -0.19
SEC13-204ENST00000397099 LSSP48449 732 aa13.86□□□□□ -0.19
SEC13-204ENST00000397099 ERVPABLB-1P60509 514 aa13.86□□□□□ -0.19
SEC13-204ENST00000397099 WASHC5Q12768 1159 aa13.86□□□□□ -0.19
SEC13-204ENST00000397099 EIF3IQ13347 325 aaKnown RBP13.86□□□□□ -0.19
SEC13-204ENST00000397099 NOMO1Q15155 1222 aa13.86□□□□□ -0.19
SEC13-204ENST00000397099 ISXQ2M1V0 245 aa13.86□□□□□ -0.19
SEC13-204ENST00000397099 CERCAMQ5T4B2 595 aa13.86□□□□□ -0.19
SEC13-204ENST00000397099 PID1Q7Z2X4 250 aa13.86□□□□□ -0.19
SEC13-204ENST00000397099 PEX26Q7Z412 305 aa13.86□□□□□ -0.19
SEC13-204ENST00000397099 ZC3H18Q86VM9 953 aaKnown RBP13.86□□□□□ -0.19
SEC13-204ENST00000397099 GALNT13Q8IUC8 556 aa13.86□□□□□ -0.19
SEC13-204ENST00000397099 CDKL3Q8IVW4 592 aaPredicted RBP13.86□□□□□ -0.19
SEC13-204ENST00000397099 PELI3Q8N2H9 469 aa13.86□□□□□ -0.19
SEC13-204ENST00000397099 LRRC57Q8N9N7 239 aa13.86□□□□□ -0.19
SEC13-204ENST00000397099 DTX3LQ8TDB6 740 aa13.86□□□□□ -0.19
SEC13-204ENST00000397099 KRT35Q92764 455 aa13.86□□□□□ -0.19
SEC13-204ENST00000397099 SCAMP4Q969E2 229 aa13.86□□□□□ -0.19
SEC13-204ENST00000397099 ZNF578Q96N58 590 aaPredicted RBP13.86□□□□□ -0.19
SEC13-204ENST00000397099 RIOK2Q9BVS4 552 aaKnown RBP13.86□□□□□ -0.19
SEC13-204ENST00000397099 GPR63Q9BZJ6 419 aa13.86□□□□□ -0.19
SEC13-204ENST00000397099 GOLPH3Q9H4A6 298 aa13.86□□□□□ -0.19
SEC13-204ENST00000397099 MRPL40Q9NQ50 206 aaKnown RBP13.86□□□□□ -0.19
SEC13-204ENST00000397099 SAE1Q9UBE0 346 aaPredicted RBP13.86□□□□□ -0.19
SEC13-204ENST00000397099 CD84Q9UIB8 345 aa13.86□□□□□ -0.19
SEC13-204ENST00000397099 REXO2Q9Y3B8 237 aaKnown RBP13.86□□□□□ -0.19
SEC13-204ENST00000397099 URB1O60287 2271 aaKnown RBP13.86□□□□□ -0.19
SEC13-204ENST00000397099 ZFC3H1O60293 1989 aaKnown RBP13.85□□□□□ -0.19
SEC13-204ENST00000397099 ZFYVE26Q68DK2 2539 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 LOC285095A0A1B0GVY8 99 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 RCCD1A6NED2 376 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 H7C0C1 242 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 NTN3O00634 580 aaPredicted RBP13.85□□□□□ -0.19
SEC13-204ENST00000397099 BRINP1O60477 761 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 CELA2BP08218 269 aaPredicted RBP13.85□□□□□ -0.19
SEC13-204ENST00000397099 SLC2A4P14672 509 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 ADCY8P40145 1251 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 GPR3P46089 330 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 GNPDA1P46926 289 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 ATP5OP48047 213 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 GALNT3Q14435 633 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 PRPSAP1Q14558 356 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 PCSK7Q16549 785 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 ZNF569Q5MCW4 686 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 TMC3Q7Z5M5 1100 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 TMEM139Q8IV31 216 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 TRAM1L1Q8N609 369 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 AVL9Q8NBF6 648 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 ACRBPQ8NEB7 543 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 CCDC112Q8NEF3 446 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 LRRN4Q8WUT4 740 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 FGF11Q92914 225 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 TMEM159Q96B96 161 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 TMEM74Q96NL1 305 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 PLEKHG4BQ96PX9 1271 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 OR2M4Q96R27 311 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 GFM1Q96RP9 751 aaKnown RBP13.85□□□□□ -0.19
SEC13-204ENST00000397099 DPYSL5Q9BPU6 564 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 HEMGNQ9BXL5 484 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 CEP41Q9BYV8 373 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 STRADBQ9C0K7 418 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 LACRTQ9GZZ8 138 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 POLR1BQ9H9Y6 1135 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 TAAR2Q9P1P5 351 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 SIRPGQ9P1W8 387 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 TFR2Q9UP52 801 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 AAR2Q9Y312 384 aaKnown RBP13.85□□□□□ -0.19
SEC13-204ENST00000397099 ZNF711Q9Y462 761 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 PCDHB1Q9Y5F3 818 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 PCDHGA8Q9Y5G5 932 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 DUSP10Q9Y6W6 482 aa13.85□□□□□ -0.19
SEC13-204ENST00000397099 TLX3O43711 291 aaPredicted RBP13.84□□□□□ -0.19
SEC13-204ENST00000397099 KRT86O43790 486 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 NRDCO43847 1150 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 NOBOXO60393 691 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 USP12O75317 370 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms