RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 TMEM165Q9HC07 324 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 ZNF639Q9UID6 485 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 PTBP2Q9UKA9 531 aaKnown RBP13.89□□□□□ -0.19
NUP98-204ENST00000397004 ZNF711Q9Y462 761 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 NLRC5Q86WI3 1866 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 RNF103-CHMP3A0A140T963 221 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 ZNF701M0R085 212 aaPredicted RBP13.89□□□□□ -0.19
NUP98-204ENST00000397004 DYNC1LI2O43237 492 aaPredicted RBP13.89□□□□□ -0.19
NUP98-204ENST00000397004 SUPT3HO75486 399 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 FGF4P08620 206 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 RBP1P09455 135 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 ATXN1LP0C7T5 689 aaKnown RBP13.89□□□□□ -0.19
NUP98-204ENST00000397004 CLCN5P51795 746 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 GEMP55040 296 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 NUP107P57740 925 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 NFKB2Q00653 900 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 FUT11Q495W5 492 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 DCDC5Q6ZRR9 648 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 USP50Q70EL3 339 aaPredicted RBP13.89□□□□□ -0.19
NUP98-204ENST00000397004 PACRGLQ8N7B6 248 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 MAML3Q96JK9 1138 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 CLOCKO15516 846 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 FASP25445 335 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 SELPLGQ14242 412 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 PIK3R6Q5UE93 754 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 TFAP2DQ7Z6R9 452 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 PDPRQ8NCN5 879 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 MUS81Q96NY9 551 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 SMIM14Q96QK8 99 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 UTS2RQ9UKP6 389 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 SH3BP1Q9Y3L3 701 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 ARL5AQ9Y689 179 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 AP3B1O00203 1094 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 PSMD3O43242 534 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 CNTN5O94779 1100 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 MOCS2O96007 188 aaPredicted RBP13.88□□□□□ -0.19
NUP98-204ENST00000397004 PIRTP0C851 137 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 UFM1P61960 85 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 ZIK1Q3SY52 487 aaPredicted RBP13.88□□□□□ -0.19
NUP98-204ENST00000397004 SIRPB2Q5JXA9 342 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 PATL1Q86TB9 770 aaKnown RBP13.88□□□□□ -0.19
NUP98-204ENST00000397004 DCBLD1Q8N8Z6 715 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 HASPINQ8TF76 798 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 ESAMQ96AP7 390 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 CCDC126Q96EE4 140 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 MYEOVQ96EZ4 313 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 ACOX2Q99424 681 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 EFHD1Q9BUP0 239 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 UPF3AQ9H1J1 476 aaKnown RBP13.88□□□□□ -0.19
NUP98-204ENST00000397004 NT5MQ9NPB1 228 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 PATJQ8NI35 1801 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 PTPRDP23468 1912 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 DOCK3Q8IZD9 2030 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 MUSKO15146 869 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 KCNH1O95259 989 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 HTR1AP08908 422 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 FDXRP22570 491 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 CD97P48960 835 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 AGTR2P50052 363 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 OR4D2P58180 307 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 ALFQ53S48 1182 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 ANKRD13AQ8IZ07 590 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 ZNF683Q8IZ20 524 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 FAM86B1Q8N7N1 296 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 OR6P1Q8NGX9 317 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 SEPT8Q92599 483 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 PABPC5Q96DU9 382 aaKnown RBP13.88□□□□□ -0.19
NUP98-204ENST00000397004 PLEKHA8Q96JA3 519 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 HOPXQ9BPY8 73 aaPredicted RBP13.88□□□□□ -0.19
NUP98-204ENST00000397004 SP110Q9HB58 689 aa13.88□□□□□ -0.19
NUP98-204ENST00000397004 E9PAM4 449 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 ADAM23O75077 832 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 ZBTB11O95625 1053 aaPredicted RBP13.87□□□□□ -0.19
NUP98-204ENST00000397004 ITGB1P05556 798 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 IREB2P48200 963 aaKnown RBP13.87□□□□□ -0.19
NUP98-204ENST00000397004 SERPINH1P50454 418 aaKnown RBP13.87□□□□□ -0.19
NUP98-204ENST00000397004 LAIR2Q6ISS4 152 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 SLC15A4Q8N697 577 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 PAPD5Q8NDF8 572 aaKnown RBP13.87□□□□□ -0.19
NUP98-204ENST00000397004 OR13F1Q8NGS4 319 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 ZC3H15Q8WU90 426 aaKnown RBP13.87□□□□□ -0.19
NUP98-204ENST00000397004 SMARCD1Q96GM5 515 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 SEPHS2Q99611 448 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 ALG2Q9H553 416 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 NDUFAF1Q9Y375 327 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 ACTL7AQ9Y615 435 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 DOCK4Q8N1I0 1966 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 K7EPI3 171 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 ENPP3O14638 875 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 AZIN1O14977 448 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 PRR35P0CG20 571 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 BRCC3P46736 316 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 IST1P53990 364 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 LIPEQ05469 1076 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 PIGFQ07326 219 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 TWF2Q6IBS0 349 aaKnown RBP13.87□□□□□ -0.19
NUP98-204ENST00000397004 TMEM214Q6NUQ4 689 aaKnown RBP13.87□□□□□ -0.19
NUP98-204ENST00000397004 FAM171BQ6P995 826 aa13.87□□□□□ -0.19
NUP98-204ENST00000397004 PTRH1Q86Y79 214 aaKnown RBP13.87□□□□□ -0.19
NUP98-204ENST00000397004 SLC22A9Q8IVM8 553 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms