RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 CCDC97Q96F63 343 aaPredicted RBP12.66□□□□□ -0.38
TRIM39-204ENST00000396548 ELMO2Q96JJ3 720 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 AARSD1Q9BTE6 412 aaKnown RBP12.66□□□□□ -0.38
TRIM39-204ENST00000396548 SUN2Q9UH99 717 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 TMPRSS11EQ9UL52 423 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 VWA7Q9Y334 891 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 MTF2Q9Y483 593 aaPredicted RBP12.66□□□□□ -0.38
TRIM39-204ENST00000396548 TARM1B6A8C7 271 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 PLIN3O60664 434 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 COL6A2P12110 1019 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 SPAM1P38567 509 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 IL9RQ01113 521 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 LEXMQ3ZCV2 418 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 CTSL3PQ5NE16 218 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 HSD11B1LQ7Z5J1 315 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 SNX20Q7Z614 316 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 TECPR1Q7Z6L1 1165 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 PLCD3Q8N3E9 789 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 GABRG3Q99928 467 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 IGSF5Q9NSI5 407 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 APPL1Q9UKG1 709 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 CRYL1Q9Y2S2 319 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 AREL1O15033 823 aa12.65□□□□□ -0.38
TRIM39-204ENST00000396548 PHGDHO43175 533 aaKnown RBP12.65□□□□□ -0.38
TRIM39-204ENST00000396548 OR1I1O60431 355 aa12.65□□□□□ -0.38
TRIM39-204ENST00000396548 PRAMEF1O95521 474 aa12.65□□□□□ -0.38
TRIM39-204ENST00000396548 CYP2A6P11509 494 aaPredicted RBP12.65□□□□□ -0.38
TRIM39-204ENST00000396548 STMN1P16949 149 aa12.65□□□□□ -0.38
TRIM39-204ENST00000396548 TTPAP49638 278 aa12.65□□□□□ -0.38
TRIM39-204ENST00000396548 DCDC1P59894 354 aa12.65□□□□□ -0.38
TRIM39-204ENST00000396548 RNF187Q5TA31 235 aaPredicted RBP12.65□□□□□ -0.38
TRIM39-204ENST00000396548 N4BP2L1Q5TBK1 243 aaPredicted RBP12.65□□□□□ -0.38
TRIM39-204ENST00000396548 FAM45BPQ6NSW5 357 aa12.65□□□□□ -0.38
TRIM39-204ENST00000396548 RAVER1Q8IY67 606 aaKnown RBP12.65□□□□□ -0.38
TRIM39-204ENST00000396548 GPATCH11Q8N954 259 aa12.65□□□□□ -0.38
TRIM39-204ENST00000396548 FAM45AQ8TCE6 357 aa12.65□□□□□ -0.38
TRIM39-204ENST00000396548 KCNV2Q8TDN2 545 aa12.65□□□□□ -0.38
TRIM39-204ENST00000396548 FAM131CQ96AQ9 280 aa12.65□□□□□ -0.38
TRIM39-204ENST00000396548 HDAC8Q9BY41 377 aa12.65□□□□□ -0.38
TRIM39-204ENST00000396548 RSPH9Q9H1X1 276 aaPredicted RBP12.65□□□□□ -0.38
TRIM39-204ENST00000396548 POPDC3Q9HBV1 291 aa12.65□□□□□ -0.38
TRIM39-204ENST00000396548 SIRPGQ9P1W8 387 aa12.65□□□□□ -0.38
TRIM39-204ENST00000396548 GLYATL1P3A0A0U1RQE8 302 aa12.65□□□□□ -0.38
TRIM39-204ENST00000396548 EGFP01133 1207 aa12.65□□□□□ -0.38
TRIM39-204ENST00000396548 CHRNA6Q15825 494 aa12.65□□□□□ -0.38
TRIM39-204ENST00000396548 C16orf46Q6P387 395 aa12.65□□□□□ -0.38
TRIM39-204ENST00000396548 FAM151BQ6UXP7 276 aa12.65□□□□□ -0.38
TRIM39-204ENST00000396548 OR6Y1Q8NGX8 325 aa12.65□□□□□ -0.38
TRIM39-204ENST00000396548 CHMP6Q96FZ7 201 aa12.65□□□□□ -0.38
TRIM39-204ENST00000396548 A0A087X1B8 175 aa12.65□□□□□ -0.39
TRIM39-204ENST00000396548 ACRV1P26436 265 aa12.65□□□□□ -0.39
TRIM39-204ENST00000396548 SERPINB4P48594 390 aa12.65□□□□□ -0.39
TRIM39-204ENST00000396548 COPAP53621 1224 aa12.65□□□□□ -0.39
TRIM39-204ENST00000396548 DBN1Q16643 649 aa12.65□□□□□ -0.39
TRIM39-204ENST00000396548 ZRANB3Q5FWF4 1079 aa12.65□□□□□ -0.39
TRIM39-204ENST00000396548 PRPF38BQ5VTL8 546 aaKnown RBP12.65□□□□□ -0.39
TRIM39-204ENST00000396548 ZDHHC20Q5W0Z9 365 aa12.65□□□□□ -0.39
TRIM39-204ENST00000396548 HLA-CQ95604 372 aa12.65□□□□□ -0.39
TRIM39-204ENST00000396548 COQ10AQ96MF6 247 aa12.65□□□□□ -0.39
TRIM39-204ENST00000396548 C8orf33Q9H7E9 229 aaPredicted RBP12.65□□□□□ -0.39
TRIM39-204ENST00000396548 HEBP1Q9NRV9 189 aa12.65□□□□□ -0.39
TRIM39-204ENST00000396548 IGLV3-16A0A075B6K0 115 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 G3V2L1 256 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 H0Y858 1186 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 BIRC5O15392 142 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 NARSO43776 548 aaKnown RBP12.64□□□□□ -0.39
TRIM39-204ENST00000396548 KLHL2O95198 593 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 EPHX1P07099 455 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 RPS3P23396 243 aaKnown RBP eCLIP12.64□□□□□ -0.39
TRIM39-204ENST00000396548 SLC26A3P40879 764 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 PTGER3P43115 390 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 CREB5Q02930 508 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 PCLAFQ15004 111 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 GPR33Q49SQ1 333 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 AARS2Q5JTZ9 985 aaKnown RBP12.64□□□□□ -0.39
TRIM39-204ENST00000396548 HHATQ5VTY9 493 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 LIPIQ6XZB0 460 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 CERS6Q6ZMG9 384 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 NUDT18Q6ZVK8 323 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 LRRC34Q8IZ02 419 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 ZNF513Q8N8E2 541 aaPredicted RBP12.64□□□□□ -0.39
TRIM39-204ENST00000396548 ARMC2Q8NEN0 867 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 ANKRD49Q8WVL7 239 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 ZNF75CPQ92670 426 aaPredicted RBP12.64□□□□□ -0.39
TRIM39-204ENST00000396548 PIAS3Q9Y6X2 628 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 RGSL1A5PLK6 1076 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 KLF11O14901 512 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 ADAM23O75077 832 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 FAM107AO95990 144 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 BPGMP07738 259 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 GLULP15104 373 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 DRD3P35462 400 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 POM121L1PQ3SYA9 428 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 CCDC153Q494R4 210 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 CGB2Q6NT52 195 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 TTC7BQ86TV6 843 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 PIM3Q86V86 326 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 SERPINA9Q86WD7 417 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 OTUD6BQ8N6M0 293 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 CCT8L2Q96SF2 557 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms