RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 LOC105371267A0A1B0GV96 52 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 FAM92AA1XBS5 289 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 MRASO14807 208 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 KLHL18O94889 574 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 PDGFAP04085 211 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 MAPTP10636 758 aaKnown RBP8.4□□□□□ -1.06
NDE1-202ENST00000396355 PRDX6P30041 224 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 DMP1Q13316 513 aaPredicted RBP8.4□□□□□ -1.06
NDE1-202ENST00000396355 PWP1Q13610 501 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 GRM7Q14831 915 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 GFOD2Q3B7J2 385 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 TRIQKQ629K1 86 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 FAM45BPQ6NSW5 357 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 P2RY8Q86VZ1 359 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 PPIL6Q8IXY8 311 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 ZBTB44Q8NCP5 570 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 ADAMTS16Q8TE57 1224 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 ACDQ96AP0 544 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 SH3KBP1Q96B97 665 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 ST6GALNAC4Q9H4F1 302 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 AMBNQ9NP70 447 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 TIGARQ9NQ88 270 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 RASSF1Q9NS23 344 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 KLHL42Q9P2K6 505 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 OAZ3Q9UMX2 235 aa8.4□□□□□ -1.06
NDE1-202ENST00000396355 PTPRZ1P23471 2315 aaPredicted RBP8.4□□□□□ -1.06
NDE1-202ENST00000396355 NRP1O14786 923 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 KCNN4O15554 427 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 CFHP08603 1231 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 GZMAP12544 262 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 CBX5P45973 191 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 ETV1P50549 477 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 GHRHRQ02643 423 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 COX10Q12887 443 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 CAPRIN1Q14444 709 aaKnown RBP8.4□□□□□ -1.07
NDE1-202ENST00000396355 ATAD3CQ5T2N8 411 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 FAM160B1Q5W0V3 765 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 BORAQ6PGQ7 559 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 KYAT3Q6YP21 454 aaKnown RBP8.4□□□□□ -1.07
NDE1-202ENST00000396355 UNC5AQ6ZN44 842 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 GK5Q6ZS86 529 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 TAS1R3Q7RTX0 852 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 MAP4K3Q8IVH8 894 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 ZNF540Q8NDQ6 660 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 FANK1Q8TC84 345 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 RMDN3Q96TC7 470 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 CHCHD6Q9BRQ6 235 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 BDH2Q9BUT1 245 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 TRIM8Q9BZR9 551 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 HDHD2Q9H0R4 259 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 MRPL47Q9HD33 250 aaKnown RBP8.4□□□□□ -1.07
NDE1-202ENST00000396355 KMT5AQ9NQR1 393 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 ERVK13-1Q9NX77 482 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 MALT1Q9UDY8 824 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 TBX20Q9UMR3 447 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 COQ4Q9Y3A0 265 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 RIPK3Q9Y572 518 aa8.4□□□□□ -1.07
NDE1-202ENST00000396355 COL6A1P12109 1028 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 OGNP20774 298 aaKnown RBP8.39□□□□□ -1.07
NDE1-202ENST00000396355 DDX6P26196 483 aaKnown RBP eCLIP8.39□□□□□ -1.07
NDE1-202ENST00000396355 AVPR1AP37288 418 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 CASP3P42574 277 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 GPLD1P80108 840 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 PTK6Q13882 451 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 BAATQ14032 418 aaPredicted RBP8.39□□□□□ -1.07
NDE1-202ENST00000396355 FGFBP1Q14512 234 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 TRIP4Q15650 581 aaPredicted RBP8.39□□□□□ -1.07
NDE1-202ENST00000396355 OGFRL1Q5TC84 451 aaPredicted RBP8.39□□□□□ -1.07
NDE1-202ENST00000396355 CATSPER4Q7RTX7 472 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 ANKS1BQ7Z6G8 1248 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 SLC51BQ86UW2 128 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 ZC3HC1Q86WB0 502 aaKnown RBP8.39□□□□□ -1.07
NDE1-202ENST00000396355 CPA6Q8N4T0 437 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 TRIM43Q96BQ3 446 aaPredicted RBP8.39□□□□□ -1.07
NDE1-202ENST00000396355 MLPHQ9BV36 600 aaPredicted RBP8.39□□□□□ -1.07
NDE1-202ENST00000396355 PRMT8Q9NR22 394 aaPredicted RBP8.39□□□□□ -1.07
NDE1-202ENST00000396355 MAP3K20Q9NYL2 800 aaKnown RBP8.39□□□□□ -1.07
NDE1-202ENST00000396355 USE1Q9NZ43 259 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 COPZ2Q9P299 210 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 VPS28Q9UK41 221 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 TESMINQ9Y4I5 508 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 A0A0G2JLL6 359 aaPredicted RBP8.39□□□□□ -1.07
NDE1-202ENST00000396355 FAM240BA0A1B0GVZ2 78 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 DHRS12A0PJE2 317 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 C19orf81C9J6K1 198 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 PRSS44E7EML9 344 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 PQBP1O60828 265 aaKnown RBP8.39□□□□□ -1.07
NDE1-202ENST00000396355 CBLP22681 906 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 PSMA2P25787 234 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 SLC26A3P40879 764 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 BACE1P56817 501 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 GBE1Q04446 702 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 SMARCB1Q12824 385 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 RPA4Q13156 261 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 HNRNPDQ14103 355 aaKnown RBP8.39□□□□□ -1.07
NDE1-202ENST00000396355 BCL2A1Q16548 175 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 LSM12Q3MHD2 195 aaKnown RBP8.39□□□□□ -1.07
NDE1-202ENST00000396355 SPESP1Q6UW49 350 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 SV2AQ7L0J3 742 aa8.39□□□□□ -1.07
NDE1-202ENST00000396355 PRRT2Q7Z6L0 340 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms