RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 PIANPQ8IYJ0 282 aa20.33■□□□□ 0.84
VCPKMT-202ENST00000395860 AADATQ8N5Z0 425 aa20.33■□□□□ 0.84
VCPKMT-202ENST00000395860 ZNF398Q8TD17 642 aa20.33■□□□□ 0.84
VCPKMT-202ENST00000395860 ELMO2Q96JJ3 720 aa20.33■□□□□ 0.84
VCPKMT-202ENST00000395860 MKRN2Q9H000 416 aaKnown RBP20.33■□□□□ 0.84
VCPKMT-202ENST00000395860 CAB39LQ9H9S4 337 aa20.33■□□□□ 0.84
VCPKMT-202ENST00000395860 SNX15Q9NRS6 342 aa20.33■□□□□ 0.84
VCPKMT-202ENST00000395860 RAD18Q9NS91 495 aa20.33■□□□□ 0.84
VCPKMT-202ENST00000395860 PCMTD2Q9NV79 361 aa20.33■□□□□ 0.84
VCPKMT-202ENST00000395860 CD84Q9UIB8 345 aa20.33■□□□□ 0.84
VCPKMT-202ENST00000395860 FBXL21Q9UKT6 434 aa20.33■□□□□ 0.84
VCPKMT-202ENST00000395860 SMG5Q9UPR3 1016 aaKnown RBP20.33■□□□□ 0.84
VCPKMT-202ENST00000395860 VPS9D1Q9Y2B5 631 aa20.33■□□□□ 0.84
VCPKMT-202ENST00000395860 PSMD11O00231 422 aa20.32■□□□□ 0.84
VCPKMT-202ENST00000395860 GPR39O43194 453 aa20.32■□□□□ 0.84
VCPKMT-202ENST00000395860 SAT1P21673 171 aa20.32■□□□□ 0.84
VCPKMT-202ENST00000395860 POLD2P49005 469 aa20.32■□□□□ 0.84
VCPKMT-202ENST00000395860 LIG3P49916 1009 aa20.32■□□□□ 0.84
VCPKMT-202ENST00000395860 CCDC15Q0P6D6 951 aa20.32■□□□□ 0.84
VCPKMT-202ENST00000395860 NFATC2Q13469 925 aa20.32■□□□□ 0.84
VCPKMT-202ENST00000395860 USP10Q14694 798 aaKnown RBP20.32■□□□□ 0.84
VCPKMT-202ENST00000395860 ACOX1Q15067 660 aa20.32■□□□□ 0.84
VCPKMT-202ENST00000395860 PIP5KL1Q5T9C9 394 aa20.32■□□□□ 0.84
VCPKMT-202ENST00000395860 SH2D5Q6ZV89 423 aa20.32■□□□□ 0.84
VCPKMT-202ENST00000395860 CMC1Q7Z7K0 106 aa20.32■□□□□ 0.84
VCPKMT-202ENST00000395860 TMPRSS6Q8IU80 811 aa20.32■□□□□ 0.84
VCPKMT-202ENST00000395860 HDDC3Q8N4P3 179 aa20.32■□□□□ 0.84
VCPKMT-202ENST00000395860 ACVR1CQ8NER5 493 aa20.32■□□□□ 0.84
VCPKMT-202ENST00000395860 ACMSDQ8TDX5 336 aa20.32■□□□□ 0.84
VCPKMT-202ENST00000395860 ISL2Q96A47 359 aa20.32■□□□□ 0.84
VCPKMT-202ENST00000395860 A0A1W2PP55 124 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 UBA6A0AVT1 1052 aaPredicted RBP20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 PRPF4O43172 522 aaKnown RBP eCLIP20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 DNTTP04053 509 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 PPARGP37231 505 aaPredicted RBP20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 CCNFP41002 786 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 ETV3P41162 512 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 TMEM52BQ4KMG9 183 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 CERS6Q6ZMG9 384 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 Q6ZVL8 140 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 SLC41A1Q8IVJ1 513 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 BANPQ8N9N5 519 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 APOPT1Q96IL0 206 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 NDNQ99608 321 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 TTC1Q99614 292 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 FAM83DQ9H4H8 585 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 WNT16Q9UBV4 365 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 CRLS1Q9UJA2 301 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 MMP17Q9ULZ9 603 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 RGSL1A5PLK6 1076 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 FAM47DPA6NHR8 397 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 C19orf67A6NJJ6 358 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 COPEO14579 308 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 TYROBPO43914 113 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 SLC12A2P55011 1212 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 DCDC1P59894 354 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 CBX1P83916 185 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 POU4F1Q01851 419 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 GPR33Q49SQ1 333 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 RBM20Q5T481 1227 aaKnown RBP20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 ANKRD42Q8N9B4 389 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 MDM1Q8TC05 714 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 CXorf40AQ8TE69 158 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 GANCQ8TET4 914 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 OMDQ99983 421 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 SPATA16Q9BXB7 569 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 NKIRAS1Q9NYS0 192 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 CORO1CQ9ULV4 474 aaPredicted RBP20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 MRPS17Q9Y2R5 130 aaKnown RBP20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 FADS3Q9Y5Q0 445 aa20.31■□□□□ 0.84
VCPKMT-202ENST00000395860 RNASEH2AO75792 299 aaKnown RBP20.3■□□□□ 0.84
VCPKMT-202ENST00000395860 MPOP05164 745 aa20.3■□□□□ 0.84
VCPKMT-202ENST00000395860 CHRNB1P11230 501 aa20.3■□□□□ 0.84
VCPKMT-202ENST00000395860 CHN1P15882 459 aa20.3■□□□□ 0.84
VCPKMT-202ENST00000395860 UGT1A6P19224 532 aa20.3■□□□□ 0.84
VCPKMT-202ENST00000395860 UGT1A1P22309 533 aa20.3■□□□□ 0.84
VCPKMT-202ENST00000395860 UGT1A4P22310 534 aa20.3■□□□□ 0.84
VCPKMT-202ENST00000395860 UGT1A3P35503 534 aa20.3■□□□□ 0.84
VCPKMT-202ENST00000395860 UGT1A5P35504 534 aa20.3■□□□□ 0.84
VCPKMT-202ENST00000395860 MAGEA12P43365 314 aa20.3■□□□□ 0.84
VCPKMT-202ENST00000395860 ITGA9Q13797 1035 aa20.3■□□□□ 0.84
VCPKMT-202ENST00000395860 AGBL4Q5VU57 503 aa20.3■□□□□ 0.84
VCPKMT-202ENST00000395860 LYPLAL1Q5VWZ2 237 aa20.3■□□□□ 0.84
VCPKMT-202ENST00000395860 RAPH1Q70E73 1250 aa20.3■□□□□ 0.84
VCPKMT-202ENST00000395860 TECPR1Q7Z6L1 1165 aa20.3■□□□□ 0.84
VCPKMT-202ENST00000395860 SERPINA9Q86WD7 417 aa20.3■□□□□ 0.84
VCPKMT-202ENST00000395860 LPGAT1Q92604 370 aa20.3■□□□□ 0.84
VCPKMT-202ENST00000395860 SHDQ96IW2 340 aa20.3■□□□□ 0.84
VCPKMT-202ENST00000395860 CABS1Q96KC9 395 aa20.3■□□□□ 0.84
VCPKMT-202ENST00000395860 SLC13A1Q9BZW2 595 aa20.3■□□□□ 0.84
VCPKMT-202ENST00000395860 IQCGQ9H095 443 aaKnown RBP20.3■□□□□ 0.84
VCPKMT-202ENST00000395860 CDH19Q9H159 772 aa20.3■□□□□ 0.84
VCPKMT-202ENST00000395860 SLC6A17Q9H1V8 727 aa20.3■□□□□ 0.84
VCPKMT-202ENST00000395860 VPS11Q9H270 941 aa20.3■□□□□ 0.84
VCPKMT-202ENST00000395860 CD248Q9HCU0 757 aa20.3■□□□□ 0.84
VCPKMT-202ENST00000395860 TRBV5-4A0A0C4DH59 114 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 WNT9AO14904 365 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 STMN1P16949 149 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 RPA3P35244 121 aaPredicted RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms