RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 PTCD2Q8WV60 388 aaKnown RBP16.47■□□□□ 0.23
CXCL1-201ENST00000395761 OR1E3Q8WZA6 343 aa16.47■□□□□ 0.23
CXCL1-201ENST00000395761 FGF22Q9HCT0 170 aa16.47■□□□□ 0.23
CXCL1-201ENST00000395761 MRPL40Q9NQ50 206 aaKnown RBP16.47■□□□□ 0.23
CXCL1-201ENST00000395761 PHPT1Q9NRX4 125 aaPredicted RBP16.47■□□□□ 0.23
CXCL1-201ENST00000395761 IL17CQ9P0M4 197 aa16.47■□□□□ 0.23
CXCL1-201ENST00000395761 CNOT6Q9ULM6 557 aaKnown RBP16.47■□□□□ 0.23
CXCL1-201ENST00000395761 ARL5AQ9Y689 179 aa16.47■□□□□ 0.23
CXCL1-201ENST00000395761 E7EVH7 732 aa16.46■□□□□ 0.23
CXCL1-201ENST00000395761 FLRT2O43155 660 aa16.46■□□□□ 0.23
CXCL1-201ENST00000395761 PHF2O75151 1096 aa16.46■□□□□ 0.23
CXCL1-201ENST00000395761 FUCA1P04066 466 aa16.46■□□□□ 0.23
CXCL1-201ENST00000395761 GRIA1P42261 906 aa16.46■□□□□ 0.23
CXCL1-201ENST00000395761 POLD2P49005 469 aa16.46■□□□□ 0.23
CXCL1-201ENST00000395761 FNTAP49354 379 aa16.46■□□□□ 0.23
CXCL1-201ENST00000395761 NOVA1P51513 510 aaKnown RBP16.46■□□□□ 0.23
CXCL1-201ENST00000395761 HNRNPKP61978 463 aaKnown RBP eCLIP16.46■□□□□ 0.23
CXCL1-201ENST00000395761 C1orf61Q13536 156 aa16.46■□□□□ 0.23
CXCL1-201ENST00000395761 SEMA5AQ13591 1074 aa16.46■□□□□ 0.23
CXCL1-201ENST00000395761 CCDC137Q6PK04 289 aaKnown RBP16.46■□□□□ 0.23
CXCL1-201ENST00000395761 EID2Q8N6I1 236 aa16.46■□□□□ 0.23
CXCL1-201ENST00000395761 ZNF548Q8NEK5 533 aaPredicted RBP16.46■□□□□ 0.23
CXCL1-201ENST00000395761 OR56A4Q8NGH8 313 aa16.46■□□□□ 0.23
CXCL1-201ENST00000395761 PDXPQ96GD0 296 aa16.46■□□□□ 0.23
CXCL1-201ENST00000395761 SPATA16Q9BXB7 569 aa16.46■□□□□ 0.23
CXCL1-201ENST00000395761 KLQ9UEF7 1012 aa16.46■□□□□ 0.23
CXCL1-201ENST00000395761 FEZ2Q9UHY8 353 aaPredicted RBP16.46■□□□□ 0.23
CXCL1-201ENST00000395761 PCOLCE2Q9UKZ9 415 aa16.46■□□□□ 0.23
CXCL1-201ENST00000395761 TMEM98Q9Y2Y6 226 aa16.46■□□□□ 0.23
CXCL1-201ENST00000395761 ERI2A8K979 691 aaKnown RBP16.45■□□□□ 0.22
CXCL1-201ENST00000395761 TRIM38O00635 465 aa16.45■□□□□ 0.22
CXCL1-201ENST00000395761 SUN1O94901 812 aa16.45■□□□□ 0.22
CXCL1-201ENST00000395761 KRT14P02533 472 aa16.45■□□□□ 0.22
CXCL1-201ENST00000395761 CEACAM5P06731 702 aa16.45■□□□□ 0.22
CXCL1-201ENST00000395761 KCNA4P22459 653 aa16.45■□□□□ 0.22
CXCL1-201ENST00000395761 LMAN1P49257 510 aa16.45■□□□□ 0.22
CXCL1-201ENST00000395761 VPS41P49754 854 aa16.45■□□□□ 0.22
CXCL1-201ENST00000395761 HK3P52790 923 aa16.45■□□□□ 0.22
CXCL1-201ENST00000395761 DCDC1P59894 354 aa16.45■□□□□ 0.22
CXCL1-201ENST00000395761 TCEA2Q15560 299 aa16.45■□□□□ 0.22
CXCL1-201ENST00000395761 TAF1AQ15573 450 aaPredicted RBP16.45■□□□□ 0.22
CXCL1-201ENST00000395761 PRRT3Q5FWE3 981 aa16.45■□□□□ 0.22
CXCL1-201ENST00000395761 PSAPL1Q6NUJ1 521 aa16.45■□□□□ 0.22
CXCL1-201ENST00000395761 DOK6Q6PKX4 331 aa16.45■□□□□ 0.22
CXCL1-201ENST00000395761 OR52K1Q8NGK4 314 aa16.45■□□□□ 0.22
CXCL1-201ENST00000395761 BRSK1Q8TDC3 778 aa16.45■□□□□ 0.22
CXCL1-201ENST00000395761 LMX1AQ8TE12 382 aa16.45■□□□□ 0.22
CXCL1-201ENST00000395761 LRRC45Q96CN5 670 aa16.45■□□□□ 0.22
CXCL1-201ENST00000395761 COX14Q96I36 57 aa16.45■□□□□ 0.22
CXCL1-201ENST00000395761 HIC2Q96JB3 615 aa16.45■□□□□ 0.22
CXCL1-201ENST00000395761 RUNDC3BQ96NL0 473 aa16.45■□□□□ 0.22
CXCL1-201ENST00000395761 FRMD8Q9BZ67 464 aaPredicted RBP16.45■□□□□ 0.22
CXCL1-201ENST00000395761 SLC13A1Q9BZW2 595 aa16.45■□□□□ 0.22
CXCL1-201ENST00000395761 SLC32A1Q9H598 525 aa16.45■□□□□ 0.22
CXCL1-201ENST00000395761 IL26Q9NPH9 171 aa16.45■□□□□ 0.22
CXCL1-201ENST00000395761 RRAGDQ9NQL2 400 aaPredicted RBP16.45■□□□□ 0.22
CXCL1-201ENST00000395761 RAD18Q9NS91 495 aa16.45■□□□□ 0.22
CXCL1-201ENST00000395761 NFKBIL1Q9UBC1 381 aaPredicted RBP16.45■□□□□ 0.22
CXCL1-201ENST00000395761 APOBEC3BQ9UH17 382 aaKnown RBP16.45■□□□□ 0.22
CXCL1-201ENST00000395761 PCYOX1Q9UHG3 505 aa16.45■□□□□ 0.22
CXCL1-201ENST00000395761 MOSPD1Q9UJG1 213 aa16.45■□□□□ 0.22
CXCL1-201ENST00000395761 OAS3Q9Y6K5 1087 aaKnown RBP16.45■□□□□ 0.22
CXCL1-201ENST00000395761 SPAARA0A1B0GVQ0 90 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 H3BM21 787 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 TNFRSF10CO14798 259 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 FFAR2O15552 330 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 RASGRP1O95267 797 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 PYGLP06737 847 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 APRTP07741 180 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 CELA2BP08218 269 aaPredicted RBP16.44■□□□□ 0.22
CXCL1-201ENST00000395761 GIMD1P0DJR0 217 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 CEACAM1P13688 526 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 LPOP22079 712 aaPredicted RBP16.44■□□□□ 0.22
CXCL1-201ENST00000395761 KELP23276 732 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 CA5AP35218 305 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 GRK6P43250 576 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 TERF1P54274 439 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 PPM1JQ5JR12 505 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 ZNF648Q5T619 568 aaPredicted RBP16.44■□□□□ 0.22
CXCL1-201ENST00000395761 C4orf22Q6V702 233 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 DGLUCYQ7Z3D6 616 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 LINC00523Q86TU6 105 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 TRAM1L1Q8N609 369 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 BAHD1Q8TBE0 780 aaPredicted RBP16.44■□□□□ 0.22
CXCL1-201ENST00000395761 SLCO2A1Q92959 643 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 LRRC61Q9BV99 259 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 CLPBQ9H078 707 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 DDX47Q9H0S4 455 aaKnown RBP16.44■□□□□ 0.22
CXCL1-201ENST00000395761 CDH19Q9H159 772 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 CYP4F12Q9HCS2 524 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 ARFGAP3Q9NP61 516 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.44■□□□□ 0.22
CXCL1-201ENST00000395761 SPASTQ9UBP0 616 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 TMPRSS11EQ9UL52 423 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 SLC17A4Q9Y2C5 497 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 NEU2Q9Y3R4 380 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 PKP3Q9Y446 797 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 DGKBQ9Y6T7 804 aa16.44■□□□□ 0.22
CXCL1-201ENST00000395761 TDRD6O60522 2096 aaKnown RBP16.44■□□□□ 0.22
CXCL1-201ENST00000395761 DCHS1Q96JQ0 3298 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms