RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 STK39Q9UEW8 545 aa14.38□□□□□ -0.11
SREBF1-205ENST00000395757 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.38□□□□□ -0.11
SREBF1-205ENST00000395757 SEPT3Q9UH03 358 aa14.38□□□□□ -0.11
SREBF1-205ENST00000395757 NDUFAF1Q9Y375 327 aa14.38□□□□□ -0.11
SREBF1-205ENST00000395757 SPO11Q9Y5K1 396 aa14.38□□□□□ -0.11
SREBF1-205ENST00000395757 CNTRLQ7Z7A1 2325 aa14.38□□□□□ -0.11
SREBF1-205ENST00000395757 SLCO1B7G3V0H7 640 aa14.38□□□□□ -0.11
SREBF1-205ENST00000395757 CRTAMO95727 393 aa14.38□□□□□ -0.11
SREBF1-205ENST00000395757 EFNA1P20827 205 aaPredicted RBP14.38□□□□□ -0.11
SREBF1-205ENST00000395757 RSPO2Q6UXX9 243 aaPredicted RBP14.38□□□□□ -0.11
SREBF1-205ENST00000395757 SETD3Q86TU7 594 aaPredicted RBP14.38□□□□□ -0.11
SREBF1-205ENST00000395757 C2CD4AQ8NCU7 369 aaPredicted RBP14.38□□□□□ -0.11
SREBF1-205ENST00000395757 CDKN2AIPNLQ96HQ2 116 aa14.38□□□□□ -0.11
SREBF1-205ENST00000395757 NOL6Q9H6R4 1146 aaKnown RBP14.38□□□□□ -0.11
SREBF1-205ENST00000395757 PSMD13Q9UNM6 376 aa14.38□□□□□ -0.11
SREBF1-205ENST00000395757 ARHGAP10A1A4S6 786 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 MTMR11A4FU01 709 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 OR4F21O95013 312 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 ZNF23P17027 643 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 AKT1P31749 480 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 VEPH1Q14D04 833 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 MAPRE2Q15555 327 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 SMYD5Q6GMV2 418 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 NANOGNBQ7Z5D8 188 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 ARHGAP18Q8N392 663 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 PGBD5Q8N414 524 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 ARL14EPQ8N8R7 260 aaPredicted RBP14.37□□□□□ -0.11
SREBF1-205ENST00000395757 PCDHGB4Q9UN71 923 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 PCDHGB5Q9Y5G0 923 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 PTPRFP10586 1907 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 SF3B1O75533 1304 aaKnown RBP eCLIP14.37□□□□□ -0.116e-7■■■■■ 99.5
SREBF1-205ENST00000395757 PFDN6O15212 129 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 SBK3P0C264 359 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 SLC2A4P14672 509 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 RABL3Q5HYI8 236 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 HECTD3Q5T447 861 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 OFCC1Q8IZS5 231 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 CANT1Q8WVQ1 401 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 PBXIP1Q96AQ6 731 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 COQ10BQ9H8M1 238 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 PDP2Q9P2J9 529 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 DNMT3LQ9UJW3 386 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 CA12O43570 354 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 DPP6P42658 865 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 ARCN1P48444 511 aaKnown RBP14.37□□□□□ -0.11
SREBF1-205ENST00000395757 MTTPP55157 894 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 OR4D1Q15615 310 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 TXNDC8Q6A555 127 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 LRRC8DQ7L1W4 858 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 GPSM1Q86YR5 675 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 FBXO22Q8NEZ5 403 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 OR13J1Q8NGT2 312 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 GRIN3AQ8TCU5 1115 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 RNF145Q96MT1 663 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 DEFB118Q96PH6 123 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 TTPALQ9BTX7 342 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 ZBTB26Q9HCK0 441 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 RPL26L1Q9UNX3 145 aaKnown RBP14.37□□□□□ -0.11
SREBF1-205ENST00000395757 ATP11BQ9Y2G3 1177 aa14.37□□□□□ -0.11
SREBF1-205ENST00000395757 HTTP42858 3142 aa14.36□□□□□ -0.11
SREBF1-205ENST00000395757 ZNF646O15015 1829 aaPredicted RBP14.36□□□□□ -0.11
SREBF1-205ENST00000395757 C2orf78A6NCI8 922 aa14.36□□□□□ -0.11
SREBF1-205ENST00000395757 RNASEH2AO75792 299 aaKnown RBP14.36□□□□□ -0.11
SREBF1-205ENST00000395757 SEMA3AQ14563 771 aa14.36□□□□□ -0.11
SREBF1-205ENST00000395757 STXBP5Q5T5C0 1151 aa14.36□□□□□ -0.11
SREBF1-205ENST00000395757 RNF111Q6ZNA4 994 aa14.36□□□□□ -0.11
SREBF1-205ENST00000395757 SLC22A9Q8IVM8 553 aa14.36□□□□□ -0.11
SREBF1-205ENST00000395757 SPPL2BQ8TCT7 592 aa14.36□□□□□ -0.11
SREBF1-205ENST00000395757 STN1Q9H668 368 aaKnown RBP14.36□□□□□ -0.11
SREBF1-205ENST00000395757 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.36□□□□□ -0.114e-6■□□□□ 10.2
SREBF1-205ENST00000395757 POLR3BQ9NW08 1133 aaPredicted RBP14.36□□□□□ -0.11
SREBF1-205ENST00000395757 WWOXQ9NZC7 414 aa14.36□□□□□ -0.11
SREBF1-205ENST00000395757 LZTS1Q9Y250 596 aa14.36□□□□□ -0.11
SREBF1-205ENST00000395757 C1orf232A0A0U1RR37 186 aa14.36□□□□□ -0.11
SREBF1-205ENST00000395757 ZNF195O14628 629 aa14.36□□□□□ -0.11
SREBF1-205ENST00000395757 SH3BP2P78314 561 aa14.36□□□□□ -0.11
SREBF1-205ENST00000395757 HSPA14Q0VDF9 509 aa14.36□□□□□ -0.11
SREBF1-205ENST00000395757 BOP1Q14137 746 aaKnown RBP14.36□□□□□ -0.11
SREBF1-205ENST00000395757 TECRLQ5HYJ1 363 aa14.36□□□□□ -0.11
SREBF1-205ENST00000395757 RBM44Q6ZP01 1051 aaKnown RBP14.36□□□□□ -0.11
SREBF1-205ENST00000395757 PIAS4Q8N2W9 510 aaPredicted RBP14.36□□□□□ -0.11
SREBF1-205ENST00000395757 PARP8Q8N3A8 854 aa14.36□□□□□ -0.11
SREBF1-205ENST00000395757 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.36□□□□□ -0.11
SREBF1-205ENST00000395757 CCDC126Q96EE4 140 aa14.36□□□□□ -0.11
SREBF1-205ENST00000395757 IMP4Q96G21 291 aaKnown RBP14.36□□□□□ -0.11
SREBF1-205ENST00000395757 CCDC90BQ9GZT6 254 aa14.36□□□□□ -0.11
SREBF1-205ENST00000395757 ASB8Q9H765 288 aa14.36□□□□□ -0.11
SREBF1-205ENST00000395757 LIN28AQ9H9Z2 209 aaKnown RBP14.36□□□□□ -0.11
SREBF1-205ENST00000395757 GPBP1L1Q9HC44 474 aaPredicted RBP14.36□□□□□ -0.11
SREBF1-205ENST00000395757 CSNK1G1Q9HCP0 422 aa14.36□□□□□ -0.11
SREBF1-205ENST00000395757 CD84Q9UIB8 345 aa14.36□□□□□ -0.11
SREBF1-205ENST00000395757 RAD54BQ9Y620 910 aa14.36□□□□□ -0.11
SREBF1-205ENST00000395757 PFDN1O60925 122 aa14.36□□□□□ -0.11
SREBF1-205ENST00000395757 MTX2O75431 263 aa14.36□□□□□ -0.11
SREBF1-205ENST00000395757 S1PR4O95977 384 aa14.36□□□□□ -0.11
SREBF1-205ENST00000395757 MZF1P28698 734 aaPredicted RBP14.36□□□□□ -0.11
SREBF1-205ENST00000395757 GSSP48637 474 aa14.36□□□□□ -0.11
SREBF1-205ENST00000395757 APLP1P51693 650 aa14.36□□□□□ -0.11
SREBF1-205ENST00000395757 PLCL1Q15111 1095 aa14.36□□□□□ -0.11
SREBF1-205ENST00000395757 FAM45BPQ6NSW5 357 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms