RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 RALGPS1Q5JS13 557 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 EGFLAMQ63HQ2 1017 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 RAET1GQ6H3X3 334 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 PPCDCQ96CD2 204 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 CENPNQ96H22 339 aaPredicted RBP13.09□□□□□ -0.31
LCA5-202ENST00000392959 LRTM1Q9HBL6 345 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 GOLGA2P5Q9HBQ8 144 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 NDOR1Q9UHB4 597 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 NPEPPSL1A6NEC2 478 aa13.08□□□□□ -0.31
LCA5-202ENST00000392959 LOC110117498-PIK3R3F6TDL0 507 aa13.08□□□□□ -0.31
LCA5-202ENST00000392959 TFECO14948 347 aaPredicted RBP13.08□□□□□ -0.31
LCA5-202ENST00000392959 WDR4P57081 412 aaKnown RBP13.08□□□□□ -0.31
LCA5-202ENST00000392959 MPP1Q00013 466 aa13.08□□□□□ -0.31
LCA5-202ENST00000392959 CLEC6AQ6EIG7 209 aa13.08□□□□□ -0.31
LCA5-202ENST00000392959 CYP4X1Q8N118 509 aa13.08□□□□□ -0.31
LCA5-202ENST00000392959 ZNF567Q8N184 647 aa13.08□□□□□ -0.31
LCA5-202ENST00000392959 TFAP2BQ92481 460 aa13.08□□□□□ -0.31
LCA5-202ENST00000392959 COX4I2Q96KJ9 171 aa13.08□□□□□ -0.31
LCA5-202ENST00000392959 RBM4BQ9BQ04 359 aaKnown RBP13.08□□□□□ -0.31
LCA5-202ENST00000392959 KIFC1Q9BW19 673 aa13.08□□□□□ -0.31
LCA5-202ENST00000392959 RBM4Q9BWF3 364 aaKnown RBP13.08□□□□□ -0.31
LCA5-202ENST00000392959 SLC39A8Q9C0K1 460 aa13.08□□□□□ -0.31
LCA5-202ENST00000392959 CXorf21Q9HAI6 301 aa13.08□□□□□ -0.31
LCA5-202ENST00000392959 NFKBIL1Q9UBC1 381 aaPredicted RBP13.08□□□□□ -0.31
LCA5-202ENST00000392959 FETUBQ9UGM5 382 aa13.08□□□□□ -0.31
LCA5-202ENST00000392959 WBP11Q9Y2W2 641 aaKnown RBP13.08□□□□□ -0.31
LCA5-202ENST00000392959 IGLV3-22A0A075B6J6 115 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 TRAV19A0A0A6YYK7 116 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 RGS10O43665 173 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 SSNA1O43805 119 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 PGK1P00558 417 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 MT-ND1P03886 318 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 CHRNGP07510 517 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 CD52P31358 61 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 ZNHIT3Q15649 155 aaPredicted RBP13.08□□□□□ -0.32
LCA5-202ENST00000392959 CPTPQ5TA50 214 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 DEF8Q6ZN54 512 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 UBE2R2Q712K3 238 aaPredicted RBP13.08□□□□□ -0.32
LCA5-202ENST00000392959 SLC34A3Q8N130 599 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 TEX47Q8TBZ9 253 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 PIH1D2Q8WWB5 315 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 BTN2A3PQ96KV6 586 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 TBATAQ96M53 351 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 SIX2Q9NPC8 291 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 POLE3Q9NRF9 147 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 CNTNAP1P78357 1384 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 ELOVL7A1L3X0 281 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 PSMD11O00231 422 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 NDST3O95803 873 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 FADS2O95864 444 aaKnown RBP13.08□□□□□ -0.32
LCA5-202ENST00000392959 IGFBP5P24593 272 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 AQP1P29972 269 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 CXCR3P49682 368 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 MTTPP55157 894 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 TUSC3Q13454 348 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 PEX6Q13608 980 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 NPY5RQ15761 445 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 ACSBG2Q5FVE4 666 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 IL23RQ5VWK5 629 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 GALNT18Q6P9A2 607 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 VSTM1Q6UX27 236 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 COLGALT2Q8IYK4 626 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 ARL10Q8N8L6 244 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 CXorf40AQ8TE69 158 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 HPS1Q92902 700 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 GPR20Q99678 358 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 TPK1Q9H3S4 243 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 ZDHHC18Q9NUE0 388 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 EURLQ9NYK6 297 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 ZNF490Q9ULM2 529 aaPredicted RBP13.08□□□□□ -0.32
LCA5-202ENST00000392959 ING4Q9UNL4 249 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 SLC15A5A6NIM6 579 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 HLA-DQA2P01906 255 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 MYL9P24844 172 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 CCNHP51946 323 aaPredicted RBP13.08□□□□□ -0.32
LCA5-202ENST00000392959 THOP1P52888 689 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 LCP2Q13094 533 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 PLET1Q6UQ28 207 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 CXXC5Q7LFL8 322 aaKnown RBP13.08□□□□□ -0.32
LCA5-202ENST00000392959 NDRG1Q92597 394 aaKnown RBP13.08□□□□□ -0.32
LCA5-202ENST00000392959 EMID1Q96A84 441 aaPredicted RBP13.08□□□□□ -0.32
LCA5-202ENST00000392959 FAM210AQ96ND0 272 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 ALG2Q9H553 416 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 PCDHB1Q9Y5F3 818 aa13.08□□□□□ -0.32
LCA5-202ENST00000392959 BCKDKO14874 412 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 ANGPTL1O95841 491 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 PRKAR1AP10644 381 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 BUD31P41223 144 aaPredicted RBP13.07□□□□□ -0.32
LCA5-202ENST00000392959 IDH3AP50213 366 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 ITGA7Q13683 1181 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 ERICH5Q6P6B1 374 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 RNF44Q7L0R7 432 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 GALNT5Q7Z7M9 940 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 FAR1Q8WVX9 515 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 CCDC189A1A4V9 331 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 CCDC162PA2VCL2 907 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 C2CD4BA6NLJ0 364 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 PGRMC2O15173 223 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 STK16O75716 305 aa13.07□□□□□ -0.32
LCA5-202ENST00000392959 TRBC1P01850 177 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms