RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 PERM1Q5SV97 790 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 ZNF662Q6ZS27 426 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 PID1Q7Z2X4 250 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 EFL1Q7Z2Z2 1120 aaKnown RBP11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 PEX26Q7Z412 305 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 PROSER1Q86XN7 944 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 SYCE1Q8N0S2 351 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 ARL10Q8N8L6 244 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 KYQ8NBH2 561 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 CCL4L1Q8NHW4 92 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 SCG3Q8WXD2 468 aaKnown RBP11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 ZCCHC14Q8WYQ9 949 aaKnown RBP11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 GLMNQ92990 594 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 NAT6Q93015 286 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 HIC2Q96JB3 615 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 SRPK1Q96SB4 655 aaKnown RBP11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 CDH19Q9H159 772 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 FAM83DQ9H4H8 585 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 C10orf88Q9H8K7 445 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 ZFYVE1Q9HBF4 777 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 SUFUQ9UMX1 484 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 GPR34Q9UPC5 381 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 CLCA2Q9UQC9 943 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 SPO11Q9Y5K1 396 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 CAPN6Q9Y6Q1 641 aa11.33□□□□□ -0.6
IGHV4-28-201ENST00000390612 CPED1A4D0V7 1026 aa11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 FADS2P1A8MWK0 482 aa11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 H7C0C1 242 aa11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 NTN3O00634 580 aaPredicted RBP11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 AURKAO14965 403 aa11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 CASC3O15234 703 aaKnown RBP11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 ARHGAP6O43182 974 aa11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 TJP3O95049 919 aa11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 FTCDO95954 541 aa11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 PIRTP0C851 137 aa11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 RBP3P10745 1247 aa11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 ADCY8P40145 1251 aa11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 ATP5OP48047 213 aa11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 EIF3EP60228 445 aaKnown RBP11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 MPP3Q13368 585 aa11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 PCSK7Q16549 785 aa11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 PYCR3Q53H96 274 aa11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 KDELC2Q7Z4H8 507 aa11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 TAF8Q7Z7C8 310 aa11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 SFTPA2Q8IWL1 248 aa11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 TTC30BQ8N4P2 665 aa11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 GPR26Q8NDV2 337 aa11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 CCHCR1Q8TD31 782 aa11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 NRSN2Q9GZP1 204 aa11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 CCDC86Q9H6F5 360 aaKnown RBP11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 CARS2Q9HA77 564 aaKnown RBP11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 SPATS2LQ9NUQ6 558 aaKnown RBP11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 UBP1Q9NZI7 540 aa11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 PKD2L2Q9NZM6 624 aa11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 KLHL8Q9P2G9 620 aaPredicted RBP11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 RABGEF1Q9UJ41 708 aa11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 PACSIN2Q9UNF0 486 aaPredicted RBP11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 ZNF711Q9Y462 761 aa11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 OAS3Q9Y6K5 1087 aaKnown RBP11.32□□□□□ -0.6
IGHV4-28-201ENST00000390612 LOC400499M0QZD8 3231 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 SRRM3A6NNA2 597 aaPredicted RBP11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 GOLGA6L6A8MZA4 724 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 DNAJC6O75061 913 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 FGF1P05230 155 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 BPIP17213 487 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 ADRA1AP35348 466 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 HMGCLP35914 325 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 CETN2P41208 172 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 CHRNA4P43681 627 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 MSLNQ13421 630 aaPredicted RBP11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 HLTFQ14527 1009 aaKnown RBP eCLIP11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 TCEA2Q15560 299 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 SLC1A5Q15758 541 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 SIRPB2Q5JXA9 342 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 ANKRD20A2Q5SQ80 823 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 CERCAMQ5T4B2 595 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 ANKRD20A1Q5TYW2 823 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 ANKRD20A3Q5VUR7 823 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 RANBP10Q6VN20 620 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 TRIM74Q86UV6 250 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 CDKL3Q8IVW4 592 aaPredicted RBP11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 LRRC8AQ8IWT6 810 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 UBL4BQ8N7F7 174 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 CCDC112Q8NEF3 446 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 FAM46DQ8NEK8 389 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 OR6C4Q8NGE1 309 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 WDR48Q8TAF3 677 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 MDM1Q8TC05 714 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 MAPK15Q8TD08 544 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 DTX3LQ8TDB6 740 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 TSGA10Q9BZW7 698 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 GBA3Q9H227 469 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 TRABDQ9H4I3 376 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 RAD18Q9NS91 495 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 VPS18Q9P253 973 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 GULP1Q9UBP9 304 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 APPL1Q9UKG1 709 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 TMPRSS11EQ9UL52 423 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 DOLKQ9UPQ8 538 aa11.31□□□□□ -0.6
IGHV4-28-201ENST00000390612 SHOC2Q9UQ13 582 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms